RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 LSG1Q9H089 658 aaKnown RBP12.41□□□□□ -0.42
CALD1-210ENST00000443197 SHPRHQ149N8 1683 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 GPAA1O43292 621 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 F13A1P00488 732 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 CCDC192P0DO97 292 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 TFCP2L1Q9NZI6 479 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 MBD4O95243 580 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 RPS6KB1P23443 525 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 NCAPD2Q15021 1401 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 PDIA6Q15084 440 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 GIMAP6Q6P9H5 292 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 MKNK2Q9HBH9 465 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 ATP10DQ9P241 1426 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 SSH2Q76I76 1423 aa12.41□□□□□ -0.42
CALD1-210ENST00000443197 PUM3Q15397 648 aaKnown RBP12.4□□□□□ -0.42
CALD1-210ENST00000443197 NLRP10Q86W26 655 aa12.4□□□□□ -0.42
CALD1-210ENST00000443197 INTS4Q96HW7 963 aaKnown RBP12.4□□□□□ -0.42
CALD1-210ENST00000443197 SCAND2PQ9GZW5 306 aaPredicted RBP12.4□□□□□ -0.42
CALD1-210ENST00000443197 KIF13AQ9H1H9 1805 aa12.4□□□□□ -0.42
CALD1-210ENST00000443197 C3P01024 1663 aa12.4□□□□□ -0.42
CALD1-210ENST00000443197 F8W031 263 aaPredicted RBP12.4□□□□□ -0.42
CALD1-210ENST00000443197 CDKL5O76039 1030 aa12.4□□□□□ -0.42
CALD1-210ENST00000443197 HMGN5P82970 282 aaKnown RBP12.4□□□□□ -0.42
CALD1-210ENST00000443197 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
CALD1-210ENST00000443197 ZSCAN29Q8IWY8 852 aaPredicted RBP12.4□□□□□ -0.42
CALD1-210ENST00000443197 ARMT1Q9H993 441 aa12.4□□□□□ -0.42
CALD1-210ENST00000443197 METAP2P50579 478 aaKnown RBP eCLIP12.4□□□□□ -0.42
CALD1-210ENST00000443197 PARP10Q53GL7 1025 aa12.4□□□□□ -0.42
CALD1-210ENST00000443197 H7C1W4 665 aa12.4□□□□□ -0.43
CALD1-210ENST00000443197 CHGBP05060 677 aa12.4□□□□□ -0.43
CALD1-210ENST00000443197 ME3Q16798 604 aa12.4□□□□□ -0.43
CALD1-210ENST00000443197 TPD52L1Q16890 204 aaPredicted RBP12.4□□□□□ -0.43
CALD1-210ENST00000443197 NAA16Q6N069 864 aaPredicted RBP12.4□□□□□ -0.43
CALD1-210ENST00000443197 HAUS7Q99871 368 aa12.4□□□□□ -0.43
CALD1-210ENST00000443197 IKQ13123 557 aaPredicted RBP12.39□□□□□ -0.43
CALD1-210ENST00000443197 BRMS1Q9HCU9 246 aa12.39□□□□□ -0.43
CALD1-210ENST00000443197 HELLSQ9NRZ9 838 aa12.39□□□□□ -0.43
CALD1-210ENST00000443197 JAK2O60674 1132 aa12.39□□□□□ -0.43
CALD1-210ENST00000443197 PHKA1P46020 1223 aa12.39□□□□□ -0.43
CALD1-210ENST00000443197 BCAMP50895 628 aa12.39□□□□□ -0.43
CALD1-210ENST00000443197 ZNF622Q969S3 477 aaKnown RBP eCLIP12.39□□□□□ -0.43
CALD1-210ENST00000443197 SLC26A6Q9BXS9 759 aa12.39□□□□□ -0.43
CALD1-210ENST00000443197 B4E1Z4 1266 aa12.39□□□□□ -0.43
CALD1-210ENST00000443197 LETM1O95202 739 aaPredicted RBP12.39□□□□□ -0.43
CALD1-210ENST00000443197 MTX1Q13505 466 aa12.39□□□□□ -0.43
CALD1-210ENST00000443197 USPL1Q5W0Q7 1092 aa12.39□□□□□ -0.43
CALD1-210ENST00000443197 ADGRB2O60241 1585 aa12.39□□□□□ -0.43
CALD1-210ENST00000443197 CDK11BP21127 795 aaKnown RBP12.38□□□□□ -0.43
CALD1-210ENST00000443197 IL6STP40189 918 aaPredicted RBP12.38□□□□□ -0.43
CALD1-210ENST00000443197 IARSP41252 1262 aaKnown RBP12.38□□□□□ -0.43
CALD1-210ENST00000443197 IQCA1Q86XH1 822 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 FAM43AQ8N2R8 423 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 LPIN2Q92539 896 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 APPBP2Q92624 585 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 PXDNQ92626 1479 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 ZNF532Q9HCE3 1301 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 GYG1P46976 350 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 CCDC173Q0VFZ6 552 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 MAP3K11Q16584 847 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 OTUD7BQ6GQQ9 843 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 KIF2CQ99661 725 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 MST1RQ04912 1400 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 CCDC102BQ68D86 513 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 TPCN1Q9ULQ1 816 aa12.38□□□□□ -0.43
CALD1-210ENST00000443197 PTPDC1A2A3K4 754 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 PRDM1O75626 825 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 CCDC183Q5T5S1 534 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 IL25Q9H293 177 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
CALD1-210ENST00000443197 TSPY2A6NKD2 308 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 ZBTB43O43298 467 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 HSPD1P10809 573 aaKnown RBP12.37□□□□□ -0.43
CALD1-210ENST00000443197 UBE2HP62256 183 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 SF3B2Q13435 895 aaKnown RBP12.37□□□□□ -0.43
CALD1-210ENST00000443197 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 MAP4K1Q92918 833 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 PDE8BO95263 885 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 SUSD4Q5VX71 490 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 SPATA5Q8NB90 893 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 TTLL11Q8NHH1 800 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 MYL10Q9BUA6 226 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 NYXQ9GZU5 481 aa12.37□□□□□ -0.43
CALD1-210ENST00000443197 RNF41Q9H4P4 317 aaPredicted RBP12.37□□□□□ -0.43
CALD1-210ENST00000443197 MEGF6O75095 1541 aa12.36□□□□□ -0.43
CALD1-210ENST00000443197 CNBD1Q8NA66 436 aa12.36□□□□□ -0.43
CALD1-210ENST00000443197 MAGEB6P1A0A0J9YX57 407 aa12.36□□□□□ -0.43
CALD1-210ENST00000443197 GADD45BO75293 160 aaPredicted RBP12.36□□□□□ -0.43
CALD1-210ENST00000443197 WTAPQ15007 396 aa12.36□□□□□ -0.43
CALD1-210ENST00000443197 ISM2Q6H9L7 571 aa12.36□□□□□ -0.43
CALD1-210ENST00000443197 SRP68Q9UHB9 627 aaKnown RBP12.36□□□□□ -0.43
CALD1-210ENST00000443197 STX8Q9UNK0 236 aa12.36□□□□□ -0.43
CALD1-210ENST00000443197 CYP21A2P08686 494 aa12.36□□□□□ -0.43
CALD1-210ENST00000443197 JMYQ8N9B5 988 aa12.36□□□□□ -0.43
CALD1-210ENST00000443197 E7EWF7 191 aa12.35□□□□□ -0.43
CALD1-210ENST00000443197 ST5P78524 1137 aa12.35□□□□□ -0.43
CALD1-210ENST00000443197 CTDSPL2Q05D32 466 aa12.35□□□□□ -0.43
CALD1-210ENST00000443197 BIN1O00499 593 aa12.35□□□□□ -0.43
CALD1-210ENST00000443197 CYP19A1P11511 503 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms