RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 MCOLN1Q9GZU1 580 aa13.01□□□□□ -0.33
HDLBP-219ENST00000442714 COA1Q9GZY4 146 aa13.01□□□□□ -0.33
HDLBP-219ENST00000442714 RNF186Q9NXI6 227 aa13.01□□□□□ -0.33
HDLBP-219ENST00000442714 LAMB2P55268 1798 aa13.01□□□□□ -0.33
HDLBP-219ENST00000442714 DDX60Q8IY21 1712 aaKnown RBP13□□□□□ -0.33
HDLBP-219ENST00000442714 ZNF609O15014 1411 aa13□□□□□ -0.33
HDLBP-219ENST00000442714 MMP14P50281 582 aa13□□□□□ -0.33
HDLBP-219ENST00000442714 FKBP1BP68106 108 aa13□□□□□ -0.33
HDLBP-219ENST00000442714 FLIIQ13045 1269 aa13□□□□□ -0.33
HDLBP-219ENST00000442714 NBPF9Q3BBW0 867 aa13□□□□□ -0.33
HDLBP-219ENST00000442714 LINS1Q8NG48 757 aa13□□□□□ -0.33
HDLBP-219ENST00000442714 MXD3Q9BW11 206 aa13□□□□□ -0.33
HDLBP-219ENST00000442714 ANKRD2Q9GZV1 360 aa13□□□□□ -0.33
HDLBP-219ENST00000442714 SAGE1Q9NXZ1 904 aa13□□□□□ -0.33
HDLBP-219ENST00000442714 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
HDLBP-219ENST00000442714 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
HDLBP-219ENST00000442714 TRPA1O75762 1119 aa12.99□□□□□ -0.33
HDLBP-219ENST00000442714 SLC10A3P09131 477 aa12.99□□□□□ -0.33
HDLBP-219ENST00000442714 ITGA6P23229 1130 aa12.99□□□□□ -0.33
HDLBP-219ENST00000442714 IGHMBP2P38935 993 aaKnown RBP12.99□□□□□ -0.33
HDLBP-219ENST00000442714 DNAAF4Q8WXU2 420 aa12.99□□□□□ -0.33
HDLBP-219ENST00000442714 MED23Q9ULK4 1368 aa12.98□□□□□ -0.33
HDLBP-219ENST00000442714 ZNF804BA4D1E1 1349 aa12.98□□□□□ -0.33
HDLBP-219ENST00000442714 WNT10BO00744 389 aa12.98□□□□□ -0.33
HDLBP-219ENST00000442714 FOXO4P98177 505 aa12.98□□□□□ -0.33
HDLBP-219ENST00000442714 PRAMEF18Q5VWM3 479 aa12.98□□□□□ -0.33
HDLBP-219ENST00000442714 TTLL5Q6EMB2 1281 aa12.98□□□□□ -0.33
HDLBP-219ENST00000442714 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-219ENST00000442714 OGFOD1Q8N543 542 aa12.98□□□□□ -0.33
HDLBP-219ENST00000442714 SCAF8Q9UPN6 1271 aaKnown RBP12.98□□□□□ -0.33
HDLBP-219ENST00000442714 UBE2Q2LH0YL09 131 aa12.97□□□□□ -0.33
HDLBP-219ENST00000442714 KLRK1P26718 216 aa12.97□□□□□ -0.33
HDLBP-219ENST00000442714 EXOSC9Q06265 439 aaKnown RBP12.97□□□□□ -0.33
HDLBP-219ENST00000442714 FKBP5Q13451 457 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-219ENST00000442714 DGKZQ13574 1117 aa12.97□□□□□ -0.33
HDLBP-219ENST00000442714 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
HDLBP-219ENST00000442714 MOB2Q70IA6 237 aa12.97□□□□□ -0.33
HDLBP-219ENST00000442714 ZBED3Q96IU2 234 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-219ENST00000442714 MPHOSPH8Q99549 860 aa12.97□□□□□ -0.33
HDLBP-219ENST00000442714 MYH16Q9H6N6 1097 aa12.97□□□□□ -0.33
HDLBP-219ENST00000442714 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-219ENST00000442714 FANCIQ9NVI1 1328 aa12.96□□□□□ -0.33
HDLBP-219ENST00000442714 TRPM7Q96QT4 1865 aa12.96□□□□□ -0.33
HDLBP-219ENST00000442714 CHRNDQ07001 517 aa12.96□□□□□ -0.33
HDLBP-219ENST00000442714 FAM161AQ3B820 660 aa12.96□□□□□ -0.33
HDLBP-219ENST00000442714 C15orf52Q6ZUT6 534 aaKnown RBP12.96□□□□□ -0.33
HDLBP-219ENST00000442714 MRS2Q9HD23 443 aa12.96□□□□□ -0.33
HDLBP-219ENST00000442714 SALL2Q9Y467 1007 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-219ENST00000442714 THSD7BQ9C0I4 1608 aa12.95□□□□□ -0.34
HDLBP-219ENST00000442714 MYO3BQ8WXR4 1341 aa12.95□□□□□ -0.34
HDLBP-219ENST00000442714 IRS2Q9Y4H2 1338 aa12.95□□□□□ -0.34
HDLBP-219ENST00000442714 SNAP23O00161 211 aa12.95□□□□□ -0.34
HDLBP-219ENST00000442714 GTF2IP78347 998 aa12.95□□□□□ -0.34
HDLBP-219ENST00000442714 MLLT1Q03111 559 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-219ENST00000442714 RASAL3Q86YV0 1011 aa12.95□□□□□ -0.34
HDLBP-219ENST00000442714 CD209Q9NNX6 404 aa12.95□□□□□ -0.34
HDLBP-219ENST00000442714 ANKRD18BA2A2Z9 1011 aa12.94□□□□□ -0.34
HDLBP-219ENST00000442714 F6X3S4 739 aa12.94□□□□□ -0.34
HDLBP-219ENST00000442714 TAF5LO75529 589 aa12.94□□□□□ -0.34
HDLBP-219ENST00000442714 TM4SF4P48230 202 aa12.94□□□□□ -0.34
HDLBP-219ENST00000442714 HELBQ8NG08 1087 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-219ENST00000442714 SCN9AQ15858 1988 aa12.94□□□□□ -0.34
HDLBP-219ENST00000442714 IFIT5Q13325 482 aaKnown RBP12.93□□□□□ -0.34
HDLBP-219ENST00000442714 EPHA10Q5JZY3 1008 aa12.93□□□□□ -0.34
HDLBP-219ENST00000442714 LDLRAD1Q5T700 205 aa12.93□□□□□ -0.34
HDLBP-219ENST00000442714 KIAA0825Q8IV33 1275 aa12.93□□□□□ -0.34
HDLBP-219ENST00000442714 CERS5Q8N5B7 392 aa12.93□□□□□ -0.34
HDLBP-219ENST00000442714 FBXW7Q969H0 707 aa12.93□□□□□ -0.34
HDLBP-219ENST00000442714 ANP32CO43423 234 aa12.92□□□□□ -0.34
HDLBP-219ENST00000442714 IL1R1P14778 569 aa12.92□□□□□ -0.34
HDLBP-219ENST00000442714 PTPN12Q05209 780 aaKnown RBP12.92□□□□□ -0.34
HDLBP-219ENST00000442714 LMBR1LQ6UX01 489 aa12.92□□□□□ -0.34
HDLBP-219ENST00000442714 MTMR14Q8NCE2 650 aa12.92□□□□□ -0.34
HDLBP-219ENST00000442714 POLR2AP24928 1970 aaKnown RBP12.92□□□□□ -0.34
HDLBP-219ENST00000442714 SASH1O94885 1247 aa12.91□□□□□ -0.34
HDLBP-219ENST00000442714 KCNJ4P48050 445 aa12.91□□□□□ -0.34
HDLBP-219ENST00000442714 DEFB129Q9H1M3 183 aa12.91□□□□□ -0.34
HDLBP-219ENST00000442714 HDAC9Q9UKV0 1011 aa12.91□□□□□ -0.34
HDLBP-219ENST00000442714 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-219ENST00000442714 GRM8O00222 908 aa12.9□□□□□ -0.34
HDLBP-219ENST00000442714 TBC1D8O95759 1140 aa12.9□□□□□ -0.34
HDLBP-219ENST00000442714 NF2P35240 595 aa12.9□□□□□ -0.34
HDLBP-219ENST00000442714 FKBP1AP62942 108 aaKnown RBP12.9□□□□□ -0.34
HDLBP-219ENST00000442714 TTLL12Q14166 644 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-219ENST00000442714 DLGAP5Q15398 846 aa12.9□□□□□ -0.34
HDLBP-219ENST00000442714 LDHAL6AQ6ZMR3 332 aa12.9□□□□□ -0.34
HDLBP-219ENST00000442714 CTU1Q7Z7A3 348 aaKnown RBP12.9□□□□□ -0.34
HDLBP-219ENST00000442714 ZNF594Q96JF6 807 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-219ENST00000442714 PRMT6Q96LA8 375 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-219ENST00000442714 ALDH1L1O75891 902 aa12.89□□□□□ -0.35
HDLBP-219ENST00000442714 CCDC57Q2TAC2 916 aa12.89□□□□□ -0.35
HDLBP-219ENST00000442714 ARMC9Q7Z3E5 817 aa12.89□□□□□ -0.35
HDLBP-219ENST00000442714 APOBEC3FQ8IUX4 373 aaKnown RBP12.89□□□□□ -0.35
HDLBP-219ENST00000442714 KAZALD1Q96I82 304 aa12.89□□□□□ -0.35
HDLBP-219ENST00000442714 PCDHAC2Q9Y5I4 1007 aa12.89□□□□□ -0.35
HDLBP-219ENST00000442714 CASP8AP2Q9UKL3 1982 aa12.89□□□□□ -0.35
HDLBP-219ENST00000442714 ZEB1P37275 1124 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-219ENST00000442714 PRKG1Q13976 671 aa12.88□□□□□ -0.35
HDLBP-219ENST00000442714 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
HDLBP-219ENST00000442714 NOM1Q5C9Z4 860 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms