RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 SASH1O94885 1247 aa19.9■□□□□ 0.78
USP39-205ENST00000442708 FGFR2P21802 821 aa19.9■□□□□ 0.78
USP39-205ENST00000442708 TFCP2Q12800 502 aa19.9■□□□□ 0.78
USP39-205ENST00000442708 UBE4AQ14139 1066 aa19.9■□□□□ 0.78
USP39-205ENST00000442708 EXOC6Q8TAG9 804 aa19.9■□□□□ 0.78
USP39-205ENST00000442708 NOP58Q9Y2X3 529 aaKnown RBP19.9■□□□□ 0.78
USP39-205ENST00000442708 SURF6O75683 361 aaKnown RBP19.89■□□□□ 0.77
USP39-205ENST00000442708 DDNO94850 711 aaPredicted RBP19.89■□□□□ 0.77
USP39-205ENST00000442708 CXCL9Q07325 125 aa19.89■□□□□ 0.77
USP39-205ENST00000442708 ARAP2Q8WZ64 1704 aa19.89■□□□□ 0.77
USP39-205ENST00000442708 CEP126Q9P2H0 1117 aa19.89■□□□□ 0.77
USP39-205ENST00000442708 RAD17O75943 681 aa19.88■□□□□ 0.77
USP39-205ENST00000442708 WDR90Q96KV7 1748 aa19.88■□□□□ 0.77
USP39-205ENST00000442708 GYG1P46976 350 aa19.87■□□□□ 0.77
USP39-205ENST00000442708 G3BP1Q13283 466 aaKnown RBP eCLIP19.87■□□□□ 0.77
USP39-205ENST00000442708 PUM3Q15397 648 aaKnown RBP19.87■□□□□ 0.77
USP39-205ENST00000442708 EXOC6BQ9Y2D4 811 aa19.87■□□□□ 0.77
USP39-205ENST00000442708 CEP350Q5VT06 3117 aa19.87■□□□□ 0.77
USP39-205ENST00000442708 POTECB2RU33 542 aa19.86■□□□□ 0.77
USP39-205ENST00000442708 EIF6P56537 245 aaKnown RBP19.86■□□□□ 0.77
USP39-205ENST00000442708 ATP2B3Q16720 1220 aa19.86■□□□□ 0.77
USP39-205ENST00000442708 FAM84BQ96KN1 310 aaPredicted RBP19.86■□□□□ 0.77
USP39-205ENST00000442708 COA1Q9GZY4 146 aa19.86■□□□□ 0.77
USP39-205ENST00000442708 G3V3G9 751 aa19.85■□□□□ 0.77
USP39-205ENST00000442708 TIMM10P62072 90 aa19.85■□□□□ 0.77
USP39-205ENST00000442708 DCAF8Q5TAQ9 597 aa19.85■□□□□ 0.77
USP39-205ENST00000442708 CD209Q9NNX6 404 aa19.85■□□□□ 0.77
USP39-205ENST00000442708 NMRK2Q9NPI5 230 aa19.85■□□□□ 0.77
USP39-205ENST00000442708 GJA3Q9Y6H8 435 aa19.85■□□□□ 0.77
USP39-205ENST00000442708 PSMD14O00487 310 aa19.84■□□□□ 0.77
USP39-205ENST00000442708 HMMRO75330 724 aa19.84■□□□□ 0.77
USP39-205ENST00000442708 ADORA1P30542 326 aa19.84■□□□□ 0.77
USP39-205ENST00000442708 CIAPIN1Q6FI81 312 aa19.84■□□□□ 0.77
USP39-205ENST00000442708 DPY19L2Q6NUT2 758 aa19.84■□□□□ 0.77
USP39-205ENST00000442708 FBXO33Q7Z6M2 555 aa19.84■□□□□ 0.77
USP39-205ENST00000442708 GPC2Q8N158 579 aa19.84■□□□□ 0.77
USP39-205ENST00000442708 LPIN2Q92539 896 aa19.84■□□□□ 0.77
USP39-205ENST00000442708 ZNF609O15014 1411 aa19.84■□□□□ 0.77
USP39-205ENST00000442708 SLC5A1P13866 664 aa19.83■□□□□ 0.77
USP39-205ENST00000442708 IL1R1P14778 569 aa19.83■□□□□ 0.77
USP39-205ENST00000442708 BCAMP50895 628 aa19.83■□□□□ 0.77
USP39-205ENST00000442708 OS9Q13438 667 aaPredicted RBP19.83■□□□□ 0.77
USP39-205ENST00000442708 ZNF804AQ7Z570 1209 aa19.83■□□□□ 0.77
USP39-205ENST00000442708 PODNQ7Z5L7 613 aa19.83■□□□□ 0.77
USP39-205ENST00000442708 KDM2BQ8NHM5 1336 aa19.82■□□□□ 0.76
USP39-205ENST00000442708 IFIT1P09914 478 aaKnown RBP19.82■□□□□ 0.76
USP39-205ENST00000442708 HIBADHP31937 336 aaKnown RBP19.82■□□□□ 0.76
USP39-205ENST00000442708 L3MBTL3Q96JM7 780 aaPredicted RBP19.82■□□□□ 0.76
USP39-205ENST00000442708 RRAGCQ9HB90 399 aa19.82■□□□□ 0.76
USP39-205ENST00000442708 ZBTB12Q9Y330 459 aaPredicted RBP19.82■□□□□ 0.76
USP39-205ENST00000442708 A0A1B0GUL7 405 aa19.81■□□□□ 0.76
USP39-205ENST00000442708 VIL1P09327 827 aaKnown RBP19.81■□□□□ 0.76
USP39-205ENST00000442708 TNIP1Q15025 636 aa19.81■□□□□ 0.76
USP39-205ENST00000442708 TDRD7Q8NHU6 1098 aaKnown RBP19.81■□□□□ 0.76
USP39-205ENST00000442708 MXD3Q9BW11 206 aa19.81■□□□□ 0.76
USP39-205ENST00000442708 GPBP1L1Q9HC44 474 aaPredicted RBP19.81■□□□□ 0.76
USP39-205ENST00000442708 IQSEC3Q9UPP2 1182 aaPredicted RBP19.81■□□□□ 0.76
USP39-205ENST00000442708 SCN4AP35499 1836 aa19.81■□□□□ 0.76
USP39-205ENST00000442708 MYH13Q9UKX3 1938 aa19.8■□□□□ 0.76
USP39-205ENST00000442708 APBB1O00213 710 aa19.8■□□□□ 0.76
USP39-205ENST00000442708 GMPSP49915 693 aaPredicted RBP19.8■□□□□ 0.76
USP39-205ENST00000442708 SCNN1DP51172 638 aa19.8■□□□□ 0.76
USP39-205ENST00000442708 DACT2Q5SW24 774 aa19.8■□□□□ 0.76
USP39-205ENST00000442708 AKAP2Q9Y2D5 859 aa19.8■□□□□ 0.76
USP39-205ENST00000442708 SHTN1A0MZ66 631 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 USP17L3A6NCW0 530 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 USP17L4A6NCW7 530 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 PHKA1P46020 1223 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 GTF2IP78347 998 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 TNNI3KQ59H18 835 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 CAVIN4Q5BKX8 364 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 USP17L1Q7RTZ2 530 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 RHPN1Q8TCX5 695 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 XAGE2Q96GT9 111 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 GPR108Q9NPR9 543 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 JAG2Q9Y219 1238 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 FPGT-TNNI3KV9GXZ4 949 aa19.79■□□□□ 0.76
USP39-205ENST00000442708 KIF3CO14782 793 aa19.78■□□□□ 0.76
USP39-205ENST00000442708 AAMPQ13685 434 aa19.78■□□□□ 0.76
USP39-205ENST00000442708 TTLL5Q6EMB2 1281 aa19.78■□□□□ 0.76
USP39-205ENST00000442708 FBXW7Q969H0 707 aa19.78■□□□□ 0.76
USP39-205ENST00000442708 EAF2Q96CJ1 260 aaPredicted RBP19.78■□□□□ 0.76
USP39-205ENST00000442708 NEUROD6Q96NK8 337 aa19.78■□□□□ 0.76
USP39-205ENST00000442708 GMLQ99445 158 aa19.78■□□□□ 0.76
USP39-205ENST00000442708 DCTPP1Q9H773 170 aa19.78■□□□□ 0.76
USP39-205ENST00000442708 COL1A1P02452 1464 aaPredicted RBP19.78■□□□□ 0.76
USP39-205ENST00000442708 EPS15P42566 896 aa19.77■□□□□ 0.76
USP39-205ENST00000442708 HSP90AB4PQ58FF6 505 aa19.77■□□□□ 0.76
USP39-205ENST00000442708 STRIP1Q5VSL9 837 aa19.77■□□□□ 0.76
USP39-205ENST00000442708 RSBN1LQ6PCB5 846 aaPredicted RBP19.77■□□□□ 0.76
USP39-205ENST00000442708 VPS37DQ86XT2 251 aa19.77■□□□□ 0.76
USP39-205ENST00000442708 ERC1Q8IUD2 1116 aa19.77■□□□□ 0.76
USP39-205ENST00000442708 CERS5Q8N5B7 392 aa19.77■□□□□ 0.76
USP39-205ENST00000442708 IL1RAPL2Q9NP60 686 aa19.77■□□□□ 0.76
USP39-205ENST00000442708 TLR7Q9NYK1 1049 aaKnown RBP19.77■□□□□ 0.76
USP39-205ENST00000442708 VEGFAP15692 232 aaPredicted RBP19.76■□□□□ 0.75
USP39-205ENST00000442708 CCDC102BQ68D86 513 aa19.76■□□□□ 0.75
USP39-205ENST00000442708 DBNDD2Q9BQY9 259 aa19.76■□□□□ 0.75
USP39-205ENST00000442708 GPRC5DQ9NZD1 345 aa19.76■□□□□ 0.75
USP39-205ENST00000442708 FAM205AQ6ZU69 1335 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms