RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 GMNNO75496 209 aa17.73■□□□□ 0.43
CDH23-207ENST00000442677 HSPA1LP34931 641 aa17.73■□□□□ 0.43
CDH23-207ENST00000442677 VCX3BQ9H321 246 aa17.73■□□□□ 0.43
CDH23-207ENST00000442677 NEK11Q8NG66 645 aa17.73■□□□□ 0.43
CDH23-207ENST00000442677 CCDC65Q8IXS2 484 aa17.72■□□□□ 0.43
CDH23-207ENST00000442677 SATB1Q01826 763 aa17.72■□□□□ 0.43
CDH23-207ENST00000442677 DIXDC1Q155Q3 683 aa17.72■□□□□ 0.43
CDH23-207ENST00000442677 HEATR3Q7Z4Q2 680 aa17.72■□□□□ 0.43
CDH23-207ENST00000442677 ECHDC1Q9NTX5 307 aa17.72■□□□□ 0.43
CDH23-207ENST00000442677 ZC3H6P61129 1189 aaKnown RBP17.72■□□□□ 0.43
CDH23-207ENST00000442677 Q6ZUG5 572 aa17.72■□□□□ 0.43
CDH23-207ENST00000442677 NKIRAS1Q9NYS0 192 aa17.72■□□□□ 0.43
CDH23-207ENST00000442677 VPS52Q8N1B4 723 aa17.72■□□□□ 0.43
CDH23-207ENST00000442677 DDX27Q96GQ7 796 aaKnown RBP17.72■□□□□ 0.43
CDH23-207ENST00000442677 ATP6V0A2Q9Y487 856 aa17.72■□□□□ 0.43
CDH23-207ENST00000442677 FAM169AQ9Y6X4 670 aa17.72■□□□□ 0.43
CDH23-207ENST00000442677 LRPPRCP42704 1394 aaKnown RBP17.72■□□□□ 0.43
CDH23-207ENST00000442677 CA8P35219 290 aa17.72■□□□□ 0.43
CDH23-207ENST00000442677 FAM212AQ96EL1 285 aa17.72■□□□□ 0.43
CDH23-207ENST00000442677 F13A1P00488 732 aa17.71■□□□□ 0.43
CDH23-207ENST00000442677 ATAD2BQ9ULI0 1458 aa17.71■□□□□ 0.43
CDH23-207ENST00000442677 ALDH3A1P30838 453 aa17.71■□□□□ 0.43
CDH23-207ENST00000442677 GEN1Q17RS7 908 aa17.71■□□□□ 0.43
CDH23-207ENST00000442677 JARID2Q92833 1246 aaPredicted RBP17.71■□□□□ 0.43
CDH23-207ENST00000442677 GAPVD1Q14C86 1478 aa17.71■□□□□ 0.43
CDH23-207ENST00000442677 WTAPQ15007 396 aa17.71■□□□□ 0.43
CDH23-207ENST00000442677 ATP2A2P16615 1042 aaKnown RBP17.71■□□□□ 0.43
CDH23-207ENST00000442677 MAP3K2Q9Y2U5 619 aa17.71■□□□□ 0.43
CDH23-207ENST00000442677 PFDN4Q9NQP4 134 aa17.7■□□□□ 0.42
CDH23-207ENST00000442677 HMG20BQ9P0W2 317 aa17.7■□□□□ 0.42
CDH23-207ENST00000442677 TRMT112Q9UI30 125 aaKnown RBP17.7■□□□□ 0.42
CDH23-207ENST00000442677 TNNC1P63316 161 aa17.7■□□□□ 0.42
CDH23-207ENST00000442677 PDE4BQ07343 736 aa17.7■□□□□ 0.42
CDH23-207ENST00000442677 CCDC122Q5T0U0 273 aa17.7■□□□□ 0.42
CDH23-207ENST00000442677 TTLL12Q14166 644 aaPredicted RBP17.7■□□□□ 0.42
CDH23-207ENST00000442677 WDR70Q9NW82 654 aa17.7■□□□□ 0.42
CDH23-207ENST00000442677 ZNF219Q9P2Y4 722 aaPredicted RBP17.7■□□□□ 0.42
CDH23-207ENST00000442677 ZNF652Q9Y2D9 606 aa17.7■□□□□ 0.42
CDH23-207ENST00000442677 SDSP20132 328 aa17.7■□□□□ 0.42
CDH23-207ENST00000442677 SPAG1Q07617 926 aa17.7■□□□□ 0.42
CDH23-207ENST00000442677 RIOK3O14730 519 aaKnown RBP17.7■□□□□ 0.42
CDH23-207ENST00000442677 ZBTB43O43298 467 aa17.7■□□□□ 0.42
CDH23-207ENST00000442677 GPTP24298 496 aa17.7■□□□□ 0.42
CDH23-207ENST00000442677 PAXIP1Q6ZW49 1069 aaPredicted RBP17.7■□□□□ 0.42
CDH23-207ENST00000442677 GOLGA6CA6NDK9 693 aa17.69■□□□□ 0.42
CDH23-207ENST00000442677 GOLGA6DP0CG33 693 aa17.69■□□□□ 0.42
CDH23-207ENST00000442677 CCT6AP40227 531 aaKnown RBP17.69■□□□□ 0.42
CDH23-207ENST00000442677 IFIT1BQ5T764 474 aaKnown RBP17.69■□□□□ 0.42
CDH23-207ENST00000442677 GOLGA6AQ9NYA3 693 aa17.69■□□□□ 0.42
CDH23-207ENST00000442677 FMNL3Q8IVF7 1028 aa17.69■□□□□ 0.42
CDH23-207ENST00000442677 NUF2Q9BZD4 464 aa17.69■□□□□ 0.42
CDH23-207ENST00000442677 TSGA10Q9BZW7 698 aa17.69■□□□□ 0.42
CDH23-207ENST00000442677 NCOA2Q15596 1464 aa17.69■□□□□ 0.42
CDH23-207ENST00000442677 MCM7P33993 719 aa17.69■□□□□ 0.42
CDH23-207ENST00000442677 PPP1R21Q6ZMI0 780 aa17.69■□□□□ 0.42
CDH23-207ENST00000442677 ZPR1O75312 459 aa17.69■□□□□ 0.42
CDH23-207ENST00000442677 FAM13AO94988 1023 aa17.69■□□□□ 0.42
CDH23-207ENST00000442677 PLIN2Q99541 437 aa17.69■□□□□ 0.42
CDH23-207ENST00000442677 NBPF7P0C2Y1 421 aaPredicted RBP17.68■□□□□ 0.42
CDH23-207ENST00000442677 SNX16P57768 344 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 TUBB4BP68371 445 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 FYB2Q5VWT5 728 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 AFAP1Q8N556 730 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 BAG1Q99933 345 aaPredicted RBP17.68■□□□□ 0.42
CDH23-207ENST00000442677 PNMA8AQ86V59 439 aaPredicted RBP17.68■□□□□ 0.42
CDH23-207ENST00000442677 POTEDQ86YR6 584 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 WHAMMQ8TF30 809 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 CRCPO75575 148 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 SETSIPP0DME0 302 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 TUBB4AP04350 444 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 SDCCAG8Q86SQ7 713 aaPredicted RBP17.68■□□□□ 0.42
CDH23-207ENST00000442677 CALCOCO2Q13137 446 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 ELF2Q15723 593 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 RTN1Q16799 776 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 UTP14CQ5TAP6 766 aaKnown RBP17.68■□□□□ 0.42
CDH23-207ENST00000442677 STX8Q9UNK0 236 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 ERMNQ8TAM6 284 aa17.68■□□□□ 0.42
CDH23-207ENST00000442677 TACO1Q9BSH4 297 aaKnown RBP17.68■□□□□ 0.42
CDH23-207ENST00000442677 FGD5Q6ZNL6 1462 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 TSNAXIP1Q2TAA8 658 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 MCUR1Q96AQ8 359 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 MAK16Q9BXY0 300 aaKnown RBP17.67■□□□□ 0.42
CDH23-207ENST00000442677 STK38LQ9Y2H1 464 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 KIF21BO75037 1637 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 RAPGEF1Q13905 1077 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.67■□□□□ 0.42
CDH23-207ENST00000442677 ERO1AQ96HE7 468 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 PLEKHH2Q8IVE3 1493 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 CALM1P0DP23 149 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 CALM2P0DP24 149 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 CALM3P0DP25 149 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 MPRIPQ6WCQ1 1025 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 CHST3Q7LGC8 479 aa17.67■□□□□ 0.42
CDH23-207ENST00000442677 RASA3Q14644 834 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 PLS1Q14651 629 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 C17orf53Q8N3J3 647 aaPredicted RBP17.66■□□□□ 0.42
CDH23-207ENST00000442677 CCT6BQ92526 530 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 SPTLC2O15270 562 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 ATP5DP30049 168 aa17.66■□□□□ 0.42
CDH23-207ENST00000442677 PPP1R42Q7Z4L9 355 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms