RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 IFNLR1Q8IU57 520 aaPredicted RBP9.22□□□□□ -0.93
RFX3-206ENST00000442560 ZC3H15Q8WU90 426 aaKnown RBP9.22□□□□□ -0.93
RFX3-206ENST00000442560 SPOCK2Q92563 424 aa9.22□□□□□ -0.93
RFX3-206ENST00000442560 ABHD8Q96I13 439 aa9.22□□□□□ -0.93
RFX3-206ENST00000442560 MYD88Q99836 296 aa9.22□□□□□ -0.93
RFX3-206ENST00000442560 PHAXQ9H814 394 aaKnown RBP9.22□□□□□ -0.93
RFX3-206ENST00000442560 POLLQ9UGP5 575 aa9.22□□□□□ -0.93
RFX3-206ENST00000442560 CDHR2Q9BYE9 1310 aa9.22□□□□□ -0.93
RFX3-206ENST00000442560 APAF1O14727 1248 aa9.21□□□□□ -0.94
RFX3-206ENST00000442560 ECE2O60344 883 aa9.21□□□□□ -0.94
RFX3-206ENST00000442560 MAP2K2P36507 400 aa9.21□□□□□ -0.94
RFX3-206ENST00000442560 RPS8P62241 208 aaKnown RBP9.21□□□□□ -0.94
RFX3-206ENST00000442560 TRIM28Q13263 835 aaKnown RBP9.21□□□□□ -0.94
RFX3-206ENST00000442560 TBC1D10BQ4KMP7 808 aaPredicted RBP9.21□□□□□ -0.94
RFX3-206ENST00000442560 TMEM92Q6UXU6 159 aa9.21□□□□□ -0.94
RFX3-206ENST00000442560 TBC1D16Q8TBP0 767 aa9.21□□□□□ -0.94
RFX3-206ENST00000442560 DPF2Q92785 391 aa9.21□□□□□ -0.94
RFX3-206ENST00000442560 JARID2Q92833 1246 aaPredicted RBP9.21□□□□□ -0.94
RFX3-206ENST00000442560 EYA3Q99504 573 aa9.21□□□□□ -0.94
RFX3-206ENST00000442560 SEC31BQ9NQW1 1179 aa9.21□□□□□ -0.94
RFX3-206ENST00000442560 KCNQ5Q9NR82 932 aa9.21□□□□□ -0.94
RFX3-206ENST00000442560 EGFRP00533 1210 aa9.2□□□□□ -0.94
RFX3-206ENST00000442560 ZNF853P0CG23 659 aa9.2□□□□□ -0.94
RFX3-206ENST00000442560 ZBTB38Q8NAP3 1195 aaPredicted RBP9.2□□□□□ -0.94
RFX3-206ENST00000442560 CCDC85AQ96PX6 553 aaPredicted RBP9.2□□□□□ -0.94
RFX3-206ENST00000442560 ZC3H12CQ9C0D7 883 aaKnown RBP9.2□□□□□ -0.94
RFX3-206ENST00000442560 PRKRIP1Q9H875 184 aaPredicted RBP9.2□□□□□ -0.94
RFX3-206ENST00000442560 ADM5C9JUS6 153 aa9.19□□□□□ -0.94
RFX3-206ENST00000442560 HUNKP57058 714 aa9.19□□□□□ -0.94
RFX3-206ENST00000442560 GNAI1P63096 354 aa9.19□□□□□ -0.94
RFX3-206ENST00000442560 C8orf58Q8NAV2 365 aa9.19□□□□□ -0.94
RFX3-206ENST00000442560 HHIPL1Q96JK4 782 aa9.19□□□□□ -0.94
RFX3-206ENST00000442560 ZIC5Q96T25 663 aa9.19□□□□□ -0.94
RFX3-206ENST00000442560 IFT57Q9NWB7 429 aa9.19□□□□□ -0.94
RFX3-206ENST00000442560 RTL9Q8NET4 1388 aa9.19□□□□□ -0.94
RFX3-206ENST00000442560 DUOX1Q9NRD9 1551 aa9.19□□□□□ -0.94
RFX3-206ENST00000442560 CCDC85CA6NKD9 419 aa9.18□□□□□ -0.94
RFX3-206ENST00000442560 PDE8AO60658 829 aa9.18□□□□□ -0.94
RFX3-206ENST00000442560 UFL1O94874 794 aa9.18□□□□□ -0.94
RFX3-206ENST00000442560 PCCAP05165 728 aaPredicted RBP9.18□□□□□ -0.94
RFX3-206ENST00000442560 RPS12P25398 132 aaKnown RBP9.18□□□□□ -0.94
RFX3-206ENST00000442560 KRT26Q7Z3Y9 468 aa9.18□□□□□ -0.94
RFX3-206ENST00000442560 CCDC191Q8NCU4 936 aa9.18□□□□□ -0.94
RFX3-206ENST00000442560 DCPSQ96C86 337 aaKnown RBP9.18□□□□□ -0.94
RFX3-206ENST00000442560 PODXL2Q9NZ53 605 aa9.18□□□□□ -0.94
RFX3-206ENST00000442560 ANKIB1Q9P2G1 1089 aa9.18□□□□□ -0.94
RFX3-206ENST00000442560 GGA1Q9UJY5 639 aa9.18□□□□□ -0.94
RFX3-206ENST00000442560 COL4A1P02462 1669 aa9.17□□□□□ -0.94
RFX3-206ENST00000442560 ASTN2O75129 1339 aaPredicted RBP9.17□□□□□ -0.94
RFX3-206ENST00000442560 CA12O43570 354 aa9.17□□□□□ -0.94
RFX3-206ENST00000442560 VIL1P09327 827 aaKnown RBP9.17□□□□□ -0.94
RFX3-206ENST00000442560 HSP90B1P14625 803 aaKnown RBP9.17□□□□□ -0.94
RFX3-206ENST00000442560 BRPF1P55201 1214 aaPredicted RBP9.17□□□□□ -0.94
RFX3-206ENST00000442560 CALD1Q05682 793 aaKnown RBP9.17□□□□□ -0.94
RFX3-206ENST00000442560 NOGQ13253 232 aa9.17□□□□□ -0.94
RFX3-206ENST00000442560 KIF4BQ2VIQ3 1234 aa9.17□□□□□ -0.94
RFX3-206ENST00000442560 CCDC152Q4G0S7 254 aa9.17□□□□□ -0.94
RFX3-206ENST00000442560 RGMBQ6NW40 437 aa9.17□□□□□ -0.94
RFX3-206ENST00000442560 C2orf69Q8N8R5 385 aa9.17□□□□□ -0.94
RFX3-206ENST00000442560 METTL22Q9BUU2 404 aaPredicted RBP9.17□□□□□ -0.94
RFX3-206ENST00000442560 GBA2Q9HCG7 927 aaPredicted RBP9.17□□□□□ -0.94
RFX3-206ENST00000442560 CWC25Q9NXE8 425 aaPredicted RBP9.17□□□□□ -0.94
RFX3-206ENST00000442560 PCNTO95613 3336 aa9.16□□□□□ -0.94
RFX3-206ENST00000442560 DDX58O95786 925 aaKnown RBP9.16□□□□□ -0.94
RFX3-206ENST00000442560 CCDC30Q5VVM6 783 aa9.16□□□□□ -0.94
RFX3-206ENST00000442560 ANKRD18AQ8IVF6 992 aa9.16□□□□□ -0.94
RFX3-206ENST00000442560 TSPYL6Q8N831 410 aa9.16□□□□□ -0.94
RFX3-206ENST00000442560 KHSRPQ92945 711 aaKnown RBP eCLIP9.16□□□□□ -0.94
RFX3-206ENST00000442560 MCOLN1Q9GZU1 580 aa9.16□□□□□ -0.94
RFX3-206ENST00000442560 GGA3Q9NZ52 723 aa9.16□□□□□ -0.94
RFX3-206ENST00000442560 MAP3K2Q9Y2U5 619 aa9.16□□□□□ -0.94
RFX3-206ENST00000442560 LAMB2P55268 1798 aa9.15□□□□□ -0.94
RFX3-206ENST00000442560 ANKRD36CQ5JPF3 1778 aa9.15□□□□□ -0.94
RFX3-206ENST00000442560 PI4KAP2A4QPH2 592 aa9.15□□□□□ -0.94
RFX3-206ENST00000442560 WTIPA6NIX2 430 aaPredicted RBP9.15□□□□□ -0.94
RFX3-206ENST00000442560 ATP2B4P23634 1241 aa9.15□□□□□ -0.94
RFX3-206ENST00000442560 ZNF157P51786 506 aaPredicted RBP9.15□□□□□ -0.94
RFX3-206ENST00000442560 KIF23Q02241 960 aaPredicted RBP9.15□□□□□ -0.94
RFX3-206ENST00000442560 SCARF1Q14162 830 aa9.15□□□□□ -0.94
RFX3-206ENST00000442560 FAM161AQ3B820 660 aa9.15□□□□□ -0.94
RFX3-206ENST00000442560 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.94
RFX3-206ENST00000442560 KSR2Q6VAB6 950 aa9.15□□□□□ -0.94
RFX3-206ENST00000442560 SULF1Q8IWU6 871 aa9.15□□□□□ -0.94
RFX3-206ENST00000442560 PI4KAP1Q8N8J0 262 aa9.15□□□□□ -0.94
RFX3-206ENST00000442560 TSR2Q969E8 191 aaKnown RBP9.15□□□□□ -0.94
RFX3-206ENST00000442560 THSD7BQ9C0I4 1608 aa9.15□□□□□ -0.94
RFX3-206ENST00000442560 XDHP47989 1333 aa9.14□□□□□ -0.95
RFX3-206ENST00000442560 FAM155AB1AL88 458 aaPredicted RBP9.14□□□□□ -0.95
RFX3-206ENST00000442560 IGKV5-2P06315 115 aa9.14□□□□□ -0.95
RFX3-206ENST00000442560 DGKZQ13574 1117 aa9.14□□□□□ -0.95
RFX3-206ENST00000442560 ARSIQ5FYB1 569 aa9.14□□□□□ -0.95
RFX3-206ENST00000442560 ANGEL2Q5VTE6 544 aaKnown RBP9.14□□□□□ -0.95
RFX3-206ENST00000442560 AGBL3Q8NEM8 1001 aa9.14□□□□□ -0.95
RFX3-206ENST00000442560 TTLL11Q8NHH1 800 aa9.14□□□□□ -0.95
RFX3-206ENST00000442560 CCDC102AQ96A19 550 aa9.14□□□□□ -0.95
RFX3-206ENST00000442560 CDCA5Q96FF9 252 aa9.14□□□□□ -0.95
RFX3-206ENST00000442560 CHMP4AQ9BY43 222 aa9.14□□□□□ -0.95
RFX3-206ENST00000442560 SCAF8Q9UPN6 1271 aaKnown RBP9.14□□□□□ -0.95
RFX3-206ENST00000442560 DDX60Q8IY21 1712 aaKnown RBP9.14□□□□□ -0.95
RFX3-206ENST00000442560 TAF1P21675 1872 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms