RNA–Protein interactions for RNA: ENST00000442250.5

ITGA6-206, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-206ENST00000442250 SMC3Q9UQE7 1217 aa11□□□□□ -0.65
ITGA6-206ENST00000442250 ZPR1O75312 459 aa11□□□□□ -0.65
ITGA6-206ENST00000442250 CHMLP26374 656 aa11□□□□□ -0.65
ITGA6-206ENST00000442250 KMT5BQ4FZB7 885 aa11□□□□□ -0.65
ITGA6-206ENST00000442250 GIGYF2Q6Y7W6 1299 aaKnown RBP11□□□□□ -0.65
ITGA6-206ENST00000442250 NLRP10Q86W26 655 aa11□□□□□ -0.65
ITGA6-206ENST00000442250 CCDC191Q8NCU4 936 aa11□□□□□ -0.65
ITGA6-206ENST00000442250 LINC00116Q8NCU8 138 aa11□□□□□ -0.65
ITGA6-206ENST00000442250 ZNF219Q9P2Y4 722 aaPredicted RBP11□□□□□ -0.65
ITGA6-206ENST00000442250 MAP3K15Q6ZN16 1313 aa11□□□□□ -0.65
ITGA6-206ENST00000442250 STX6O43752 255 aa10.99□□□□□ -0.65
ITGA6-206ENST00000442250 CCDC192P0DO97 292 aa10.99□□□□□ -0.65
ITGA6-206ENST00000442250 ZSCAN22P10073 491 aaPredicted RBP10.99□□□□□ -0.65
ITGA6-206ENST00000442250 GABPB1Q06547 395 aaPredicted RBP10.99□□□□□ -0.65
ITGA6-206ENST00000442250 CCDC83Q8IWF9 413 aa10.99□□□□□ -0.65
ITGA6-206ENST00000442250 CHMP4CQ96CF2 233 aa10.99□□□□□ -0.65
ITGA6-206ENST00000442250 DBNLQ9UJU6 430 aaKnown RBP10.99□□□□□ -0.65
ITGA6-206ENST00000442250 WTIPA6NIX2 430 aaPredicted RBP10.99□□□□□ -0.65
ITGA6-206ENST00000442250 USP27XA6NNY8 438 aa10.99□□□□□ -0.65
ITGA6-206ENST00000442250 POLR3GO15318 223 aaPredicted RBP10.99□□□□□ -0.65
ITGA6-206ENST00000442250 CUL4AQ13619 759 aa10.99□□□□□ -0.65
ITGA6-206ENST00000442250 ERC1Q8IUD2 1116 aa10.99□□□□□ -0.65
ITGA6-206ENST00000442250 SMTNL1A8MU46 457 aa10.99□□□□□ -0.65
ITGA6-206ENST00000442250 GLRX3O76003 335 aaKnown RBP10.99□□□□□ -0.65
ITGA6-206ENST00000442250 MCM2P49736 904 aa10.99□□□□□ -0.65
ITGA6-206ENST00000442250 PRPF40BQ6NWY9 871 aaKnown RBP10.99□□□□□ -0.65
ITGA6-206ENST00000442250 TNNT3P45378 269 aaPredicted RBP10.98□□□□□ -0.65
ITGA6-206ENST00000442250 FOXO4P98177 505 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 TCHHQ07283 1943 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 ANO6Q4KMQ2 910 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 TNNI3KQ59H18 835 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 CEP135Q66GS9 1140 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 FAM196AQ6ZSG2 479 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 FILIP1Q7Z7B0 1213 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 AK7Q96M32 723 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 TFIP11Q9UBB9 837 aaKnown RBP10.98□□□□□ -0.65
ITGA6-206ENST00000442250 FPGT-TNNI3KV9GXZ4 949 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 A0A087WWV3 80 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 A0A1B0GUL7 405 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 GOLGA6L4A6NEF3 574 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 CAPN2P17655 700 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 RFC4P35249 363 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 FOSBP53539 338 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 VPS72Q15906 364 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 TTC39AQ5SRH9 613 aa10.98□□□□□ -0.65
ITGA6-206ENST00000442250 MSL1Q68DK7 614 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 FBXO38Q6PIJ6 1188 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 CDCA7Q9BWT1 371 aaPredicted RBP10.97□□□□□ -0.65
ITGA6-206ENST00000442250 H7C1W4 665 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 IDH1O75874 414 aaKnown RBP10.97□□□□□ -0.65
ITGA6-206ENST00000442250 F13A1P00488 732 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 IFIT1P09914 478 aaKnown RBP10.97□□□□□ -0.65
ITGA6-206ENST00000442250 NMIQ13287 307 aaPredicted RBP10.97□□□□□ -0.65
ITGA6-206ENST00000442250 SLC4A8Q2Y0W8 1093 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 INTS5Q6P9B9 1019 aaKnown RBP10.97□□□□□ -0.65
ITGA6-206ENST00000442250 SLC51AQ86UW1 340 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 AMIGO3Q86WK7 504 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 PI4K2BQ8TCG2 481 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 CACTINQ8WUQ7 758 aaKnown RBP10.97□□□□□ -0.65
ITGA6-206ENST00000442250 ANKRD18BA2A2Z9 1011 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 APPP05067 770 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 LIG1P18858 919 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 ZSCAN25Q6NSZ9 544 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 NBPF5PQ86XG9 351 aaPredicted RBP10.97□□□□□ -0.65
ITGA6-206ENST00000442250 NECAB1Q8N987 351 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 CLIP2Q9UDT6 1046 aa10.97□□□□□ -0.65
ITGA6-206ENST00000442250 TRPC5Q9UL62 973 aaPredicted RBP10.97□□□□□ -0.65
ITGA6-206ENST00000442250 UBN2Q6ZU65 1347 aa10.96□□□□□ -0.65
ITGA6-206ENST00000442250 LARGE1O95461 756 aa10.96□□□□□ -0.65
ITGA6-206ENST00000442250 AK2P54819 239 aa10.96□□□□□ -0.65
ITGA6-206ENST00000442250 INTS4Q96HW7 963 aaKnown RBP10.96□□□□□ -0.65
ITGA6-206ENST00000442250 LRRC2Q9BYS8 371 aa10.96□□□□□ -0.65
ITGA6-206ENST00000442250 PHLPP1O60346 1717 aa10.96□□□□□ -0.65
ITGA6-206ENST00000442250 TYRO3Q06418 890 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 CCDC144BQ3MJ40 725 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 CCDC144CPQ8IYA2 1237 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 UTP14AQ9BVJ6 771 aaKnown RBP10.96□□□□□ -0.66
ITGA6-206ENST00000442250 RTCBQ9Y3I0 505 aaKnown RBP10.96□□□□□ -0.66
ITGA6-206ENST00000442250 BCL9O00512 1426 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 EYA2O00167 538 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 GJB2P29033 226 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 PTH1RQ03431 593 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 STK3Q13188 491 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 ERFEQ4G0M1 354 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 ZBTB38Q8NAP3 1195 aaPredicted RBP10.96□□□□□ -0.66
ITGA6-206ENST00000442250 NEK11Q8NG66 645 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 NUP62CLQ9H1M0 184 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 DNAJC25Q9H1X3 360 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 CBX8Q9HC52 389 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 ABCF2Q9UG63 623 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 THRAP3Q9Y2W1 955 aaKnown RBP10.96□□□□□ -0.66
ITGA6-206ENST00000442250 MORC2Q9Y6X9 1032 aaPredicted RBP10.96□□□□□ -0.66
ITGA6-206ENST00000442250 LTBP4Q8N2S1 1624 aa10.96□□□□□ -0.66
ITGA6-206ENST00000442250 COL18A1P39060 1754 aa10.95□□□□□ -0.66
ITGA6-206ENST00000442250 TPM3P06753 285 aa10.95□□□□□ -0.66
ITGA6-206ENST00000442250 HNRNPH2P55795 449 aaKnown RBP10.95□□□□□ -0.66
ITGA6-206ENST00000442250 HAND2P61296 217 aa10.95□□□□□ -0.66
ITGA6-206ENST00000442250 FAM200AQ8TCP9 573 aa10.95□□□□□ -0.66
ITGA6-206ENST00000442250 SMARCC1Q92922 1105 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-206ENST00000442250 NOL10Q9BSC4 688 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms