RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 ANKRD18AQ8IVF6 992 aa12.99□□□□□ -0.33
SYN3-204ENST00000441821 LAS1LQ9Y4W2 734 aaKnown RBP12.99□□□□□ -0.33
SYN3-204ENST00000441821 TRIM17Q9Y577 477 aa12.99□□□□□ -0.33
SYN3-204ENST00000441821 MED23Q9ULK4 1368 aa12.98□□□□□ -0.33
SYN3-204ENST00000441821 MANSC4A6NHS7 340 aaPredicted RBP12.98□□□□□ -0.33
SYN3-204ENST00000441821 PCCAP05165 728 aaPredicted RBP12.98□□□□□ -0.33
SYN3-204ENST00000441821 STRIP1Q5VSL9 837 aa12.98□□□□□ -0.33
SYN3-204ENST00000441821 OTOP1Q7RTM1 612 aa12.98□□□□□ -0.33
SYN3-204ENST00000441821 CCDC191Q8NCU4 936 aa12.98□□□□□ -0.33
SYN3-204ENST00000441821 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
SYN3-204ENST00000441821 PRKG1Q13976 671 aa12.97□□□□□ -0.33
SYN3-204ENST00000441821 NEUROD2Q15784 382 aa12.97□□□□□ -0.33
SYN3-204ENST00000441821 IFNL1Q8IU54 200 aa12.97□□□□□ -0.33
SYN3-204ENST00000441821 APOBEC3FQ8IUX4 373 aaKnown RBP12.97□□□□□ -0.33
SYN3-204ENST00000441821 CCDC85AQ96PX6 553 aaPredicted RBP12.97□□□□□ -0.33
SYN3-204ENST00000441821 MXD3Q9BW11 206 aa12.97□□□□□ -0.33
SYN3-204ENST00000441821 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
SYN3-204ENST00000441821 SZT2Q5T011 3432 aa12.97□□□□□ -0.33
SYN3-204ENST00000441821 RBBP6Q7Z6E9 1792 aaKnown RBP12.97□□□□□ -0.33
SYN3-204ENST00000441821 WTIPA6NIX2 430 aaPredicted RBP12.96□□□□□ -0.33
SYN3-204ENST00000441821 SASH1O94885 1247 aa12.96□□□□□ -0.33
SYN3-204ENST00000441821 FXR1P51114 621 aaKnown RBP eCLIP12.96□□□□□ -0.33
SYN3-204ENST00000441821 DUSP27Q5VZP5 1158 aa12.96□□□□□ -0.33
SYN3-204ENST00000441821 SLC10A4Q96EP9 437 aa12.96□□□□□ -0.33
SYN3-204ENST00000441821 CDC5LQ99459 802 aaKnown RBP12.96□□□□□ -0.33
SYN3-204ENST00000441821 MYD88Q99836 296 aa12.96□□□□□ -0.33
SYN3-204ENST00000441821 COA1Q9GZY4 146 aa12.96□□□□□ -0.33
SYN3-204ENST00000441821 CWC25Q9NXE8 425 aaPredicted RBP12.96□□□□□ -0.33
SYN3-204ENST00000441821 ANGEL1Q9UNK9 670 aaKnown RBP12.96□□□□□ -0.33
SYN3-204ENST00000441821 MINPP1Q9UNW1 487 aa12.96□□□□□ -0.33
SYN3-204ENST00000441821 PTPN22Q9Y2R2 807 aa12.96□□□□□ -0.33
SYN3-204ENST00000441821 ZNF646O15015 1829 aaPredicted RBP12.96□□□□□ -0.33
SYN3-204ENST00000441821 ZBTB48P10074 688 aaPredicted RBP12.95□□□□□ -0.34
SYN3-204ENST00000441821 MAP3K11Q16584 847 aa12.95□□□□□ -0.34
SYN3-204ENST00000441821 FBXW7Q969H0 707 aa12.95□□□□□ -0.34
SYN3-204ENST00000441821 ARMC5Q96C12 935 aa12.95□□□□□ -0.34
SYN3-204ENST00000441821 ERO1AQ96HE7 468 aa12.95□□□□□ -0.34
SYN3-204ENST00000441821 ZBED3Q96IU2 234 aaPredicted RBP12.95□□□□□ -0.34
SYN3-204ENST00000441821 BSDC1Q9NW68 430 aaPredicted RBP12.95□□□□□ -0.34
SYN3-204ENST00000441821 COL1A1P02452 1464 aaPredicted RBP12.95□□□□□ -0.34
SYN3-204ENST00000441821 UNCXA6NJT0 531 aa12.94□□□□□ -0.34
SYN3-204ENST00000441821 IGF2BP3O00425 579 aaKnown RBP eCLIP12.94□□□□□ -0.34
SYN3-204ENST00000441821 EN2P19622 333 aaPredicted RBP12.94□□□□□ -0.34
SYN3-204ENST00000441821 CCT4P50991 539 aaKnown RBP12.94□□□□□ -0.34
SYN3-204ENST00000441821 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
SYN3-204ENST00000441821 JARID2Q92833 1246 aaPredicted RBP12.94□□□□□ -0.34
SYN3-204ENST00000441821 WNK4Q96J92 1243 aa12.94□□□□□ -0.34
SYN3-204ENST00000441821 PHAXQ9H814 394 aaKnown RBP12.94□□□□□ -0.34
SYN3-204ENST00000441821 CTSWP56202 376 aa12.93□□□□□ -0.34
SYN3-204ENST00000441821 CCDC146Q8IYE0 955 aa12.93□□□□□ -0.34
SYN3-204ENST00000441821 DEFB129Q9H1M3 183 aa12.93□□□□□ -0.34
SYN3-204ENST00000441821 FZD1Q9UP38 647 aa12.93□□□□□ -0.34
SYN3-204ENST00000441821 LEMD3Q9Y2U8 911 aa12.93□□□□□ -0.34
SYN3-204ENST00000441821 LAMB1P07942 1786 aa12.93□□□□□ -0.34
SYN3-204ENST00000441821 PPP1R12BO60237 982 aaPredicted RBP12.92□□□□□ -0.34
SYN3-204ENST00000441821 OTUD7BQ6GQQ9 843 aa12.92□□□□□ -0.34
SYN3-204ENST00000441821 TXNRD3Q86VQ6 643 aa12.92□□□□□ -0.34
SYN3-204ENST00000441821 KIAA0825Q8IV33 1275 aa12.92□□□□□ -0.34
SYN3-204ENST00000441821 TTLL11Q8NHH1 800 aa12.92□□□□□ -0.34
SYN3-204ENST00000441821 CD99L2Q8TCZ2 262 aa12.92□□□□□ -0.34
SYN3-204ENST00000441821 RUNDC1Q96C34 613 aa12.92□□□□□ -0.34
SYN3-204ENST00000441821 METTL22Q9BUU2 404 aaPredicted RBP12.92□□□□□ -0.34
SYN3-204ENST00000441821 EFCC1Q9HA90 598 aa12.92□□□□□ -0.34
SYN3-204ENST00000441821 PPP2R3BQ9Y5P8 575 aa12.92□□□□□ -0.34
SYN3-204ENST00000441821 SP3Q02447 781 aa12.91□□□□□ -0.34
SYN3-204ENST00000441821 CRHR2Q13324 411 aa12.91□□□□□ -0.34
SYN3-204ENST00000441821 CLMNQ96JQ2 1002 aa12.91□□□□□ -0.34
SYN3-204ENST00000441821 GREM2Q9H772 168 aa12.91□□□□□ -0.34
SYN3-204ENST00000441821 MBIPQ9NS73 344 aa12.91□□□□□ -0.34
SYN3-204ENST00000441821 TESPA1A2RU30 521 aaPredicted RBP12.9□□□□□ -0.34
SYN3-204ENST00000441821 DDX58O95786 925 aaKnown RBP12.9□□□□□ -0.34
SYN3-204ENST00000441821 RALBP1Q15311 655 aa12.9□□□□□ -0.34
SYN3-204ENST00000441821 DLGAP5Q15398 846 aa12.9□□□□□ -0.34
SYN3-204ENST00000441821 SUPT20HL1Q3ZLR7 823 aa12.9□□□□□ -0.34
SYN3-204ENST00000441821 MTMR14Q8NCE2 650 aa12.9□□□□□ -0.34
SYN3-204ENST00000441821 TMEM106CQ9BVX2 250 aa12.9□□□□□ -0.34
SYN3-204ENST00000441821 COLQQ9Y215 455 aaPredicted RBP12.9□□□□□ -0.34
SYN3-204ENST00000441821 SSC5DA1L4H1 1573 aa12.9□□□□□ -0.35
SYN3-204ENST00000441821 ZNF804BA4D1E1 1349 aa12.89□□□□□ -0.35
SYN3-204ENST00000441821 ZNF853P0CG23 659 aa12.89□□□□□ -0.35
SYN3-204ENST00000441821 GTF2IP78347 998 aa12.89□□□□□ -0.35
SYN3-204ENST00000441821 ZNF333Q96JL9 665 aa12.89□□□□□ -0.35
SYN3-204ENST00000441821 PTPN18Q99952 460 aa12.89□□□□□ -0.35
SYN3-204ENST00000441821 ANKRD2Q9GZV1 360 aa12.89□□□□□ -0.35
SYN3-204ENST00000441821 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.89□□□□□ -0.35
SYN3-204ENST00000441821 RANBP2P49792 3224 aaKnown RBP12.89□□□□□ -0.35
SYN3-204ENST00000441821 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
SYN3-204ENST00000441821 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
SYN3-204ENST00000441821 KLRK1P26718 216 aa12.88□□□□□ -0.35
SYN3-204ENST00000441821 GJA5P36382 358 aa12.88□□□□□ -0.35
SYN3-204ENST00000441821 IGHMBP2P38935 993 aaKnown RBP12.88□□□□□ -0.35
SYN3-204ENST00000441821 IREB2P48200 963 aaKnown RBP12.88□□□□□ -0.35
SYN3-204ENST00000441821 CAP1Q01518 475 aa12.88□□□□□ -0.35
SYN3-204ENST00000441821 ARHGEF6Q15052 776 aa12.88□□□□□ -0.35
SYN3-204ENST00000441821 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
SYN3-204ENST00000441821 CHMP4AQ9BY43 222 aa12.88□□□□□ -0.35
SYN3-204ENST00000441821 MAP3K2Q9Y2U5 619 aa12.88□□□□□ -0.35
SYN3-204ENST00000441821 A0A0C4DFX4 3053 aa12.87□□□□□ -0.35
SYN3-204ENST00000441821 ELL2O00472 640 aaPredicted RBP12.87□□□□□ -0.35
SYN3-204ENST00000441821 MYO1BO43795 1136 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms