RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 HHIPQ96QV1 700 aa8.37□□□□□ -1.07
PFDN4-202ENST00000441080 BCL11AQ9H165 835 aa8.37□□□□□ -1.07
PFDN4-202ENST00000441080 SUV39H2Q9H5I1 410 aa8.37□□□□□ -1.07
PFDN4-202ENST00000441080 LIN7BQ9HAP6 207 aa8.37□□□□□ -1.07
PFDN4-202ENST00000441080 M0R082 166 aa8.36□□□□□ -1.07
PFDN4-202ENST00000441080 C20orf204Q6ZNR8 217 aa8.36□□□□□ -1.07
PFDN4-202ENST00000441080 TMEM102Q8N9M5 508 aaPredicted RBP8.36□□□□□ -1.07
PFDN4-202ENST00000441080 ZNF417Q8TAU3 575 aa8.36□□□□□ -1.07
PFDN4-202ENST00000441080 FRMD6Q96NE9 622 aa8.36□□□□□ -1.07
PFDN4-202ENST00000441080 ZNF587Q96SQ5 575 aaPredicted RBP8.36□□□□□ -1.07
PFDN4-202ENST00000441080 RNF19AQ9NV58 838 aa8.36□□□□□ -1.07
PFDN4-202ENST00000441080 NFKBIEO00221 500 aa8.35□□□□□ -1.07
PFDN4-202ENST00000441080 PDE2AO00408 941 aaPredicted RBP8.35□□□□□ -1.07
PFDN4-202ENST00000441080 LILRB5O75023 590 aa8.35□□□□□ -1.07
PFDN4-202ENST00000441080 PSMD2Q13200 908 aa8.35□□□□□ -1.07
PFDN4-202ENST00000441080 GRM2Q14416 872 aa8.35□□□□□ -1.07
PFDN4-202ENST00000441080 ZSCAN1Q8NBB4 408 aa8.35□□□□□ -1.07
PFDN4-202ENST00000441080 TTC9Q92623 222 aa8.35□□□□□ -1.07
PFDN4-202ENST00000441080 POP1Q99575 1024 aaKnown RBP8.35□□□□□ -1.07
PFDN4-202ENST00000441080 BCO2Q9BYV7 579 aa8.35□□□□□ -1.07
PFDN4-202ENST00000441080 RRAGCQ9HB90 399 aa8.35□□□□□ -1.07
PFDN4-202ENST00000441080 TRIM33Q9UPN9 1127 aa8.35□□□□□ -1.07
PFDN4-202ENST00000441080 TRAK1Q9UPV9 953 aa8.35□□□□□ -1.07
PFDN4-202ENST00000441080 GIPC1O14908 333 aa8.34□□□□□ -1.07
PFDN4-202ENST00000441080 ARHGEF15O94989 841 aa8.34□□□□□ -1.07
PFDN4-202ENST00000441080 INSM1Q01101 510 aaPredicted RBP8.34□□□□□ -1.07
PFDN4-202ENST00000441080 GDF6Q6KF10 455 aaPredicted RBP8.34□□□□□ -1.07
PFDN4-202ENST00000441080 NXPE4Q6UWF7 544 aa8.34□□□□□ -1.07
PFDN4-202ENST00000441080 C8orf86Q6ZUL3 223 aa8.34□□□□□ -1.07
PFDN4-202ENST00000441080 CCNJLQ8IV13 435 aa8.34□□□□□ -1.07
PFDN4-202ENST00000441080 NXPE3Q969Y0 559 aa8.34□□□□□ -1.07
PFDN4-202ENST00000441080 FAM161BQ96MY7 647 aa8.34□□□□□ -1.07
PFDN4-202ENST00000441080 TCF12Q99081 682 aa8.34□□□□□ -1.07
PFDN4-202ENST00000441080 BHLHE41Q9C0J9 482 aaPredicted RBP8.34□□□□□ -1.07
PFDN4-202ENST00000441080 MRS2Q9HD23 443 aa8.34□□□□□ -1.07
PFDN4-202ENST00000441080 PTPRAP18433 802 aa8.33□□□□□ -1.08
PFDN4-202ENST00000441080 DAB2P98082 770 aa8.33□□□□□ -1.08
PFDN4-202ENST00000441080 TMC4Q7Z404 712 aa8.33□□□□□ -1.08
PFDN4-202ENST00000441080 ASAP3Q8TDY4 903 aa8.33□□□□□ -1.08
PFDN4-202ENST00000441080 LACRTQ9GZZ8 138 aa8.33□□□□□ -1.08
PFDN4-202ENST00000441080 C12orf49Q9H741 205 aa8.33□□□□□ -1.08
PFDN4-202ENST00000441080 PPP4R2Q9NY27 417 aa8.33□□□□□ -1.08
PFDN4-202ENST00000441080 FAM177BA6PVY3 158 aa8.32□□□□□ -1.08
PFDN4-202ENST00000441080 LORP23490 312 aaPredicted RBP8.32□□□□□ -1.08
PFDN4-202ENST00000441080 EIF4BP23588 611 aaKnown RBP8.32□□□□□ -1.08
PFDN4-202ENST00000441080 ITGAEP38570 1179 aa8.32□□□□□ -1.08
PFDN4-202ENST00000441080 DGKGP49619 791 aa8.32□□□□□ -1.08
PFDN4-202ENST00000441080 RBM25P49756 843 aaKnown RBP8.32□□□□□ -1.08
PFDN4-202ENST00000441080 AFF1P51825 1210 aaKnown RBP8.32□□□□□ -1.08
PFDN4-202ENST00000441080 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
PFDN4-202ENST00000441080 ZNF428Q96B54 188 aa8.32□□□□□ -1.08
PFDN4-202ENST00000441080 OSBPL7Q9BZF2 842 aa8.32□□□□□ -1.08
PFDN4-202ENST00000441080 SRCIN1Q9C0H9 1055 aa8.32□□□□□ -1.08
PFDN4-202ENST00000441080 PRDM6Q9NQX0 595 aa8.32□□□□□ -1.08
PFDN4-202ENST00000441080 AK5Q9Y6K8 562 aa8.32□□□□□ -1.08
PFDN4-202ENST00000441080 METTL12A8MUP2 240 aa8.31□□□□□ -1.08
PFDN4-202ENST00000441080 SORBS3O60504 671 aa8.31□□□□□ -1.08
PFDN4-202ENST00000441080 GRIK5Q16478 980 aa8.31□□□□□ -1.08
PFDN4-202ENST00000441080 CACTIN-AS1Q8N1I8 211 aa8.31□□□□□ -1.08
PFDN4-202ENST00000441080 GLIS3Q8NEA6 775 aa8.31□□□□□ -1.08
PFDN4-202ENST00000441080 ABCB6Q9NP58 842 aa8.31□□□□□ -1.08
PFDN4-202ENST00000441080 HOXB4P17483 251 aaPredicted RBP8.3□□□□□ -1.08
PFDN4-202ENST00000441080 GRIA4P48058 902 aa8.3□□□□□ -1.08
PFDN4-202ENST00000441080 FCGRTP55899 365 aa8.3□□□□□ -1.08
PFDN4-202ENST00000441080 ADAMTSL4Q6UY14 1074 aa8.3□□□□□ -1.08
PFDN4-202ENST00000441080 IL22RA1Q8N6P7 574 aa8.3□□□□□ -1.08
PFDN4-202ENST00000441080 BSNDQ8WZ55 320 aa8.3□□□□□ -1.08
PFDN4-202ENST00000441080 ADAM19Q9H013 955 aa8.3□□□□□ -1.08
PFDN4-202ENST00000441080 FAM8A1Q9UBU6 413 aa8.3□□□□□ -1.08
PFDN4-202ENST00000441080 VTI1BQ9UEU0 232 aa8.3□□□□□ -1.08
PFDN4-202ENST00000441080 A0A096LPE4 126 aa8.29□□□□□ -1.08
PFDN4-202ENST00000441080 TMEM238LA0A1B0GVL6 79 aa8.29□□□□□ -1.08
PFDN4-202ENST00000441080 A0A1W2PPZ6 126 aa8.29□□□□□ -1.08
PFDN4-202ENST00000441080 UNCXA6NJT0 531 aa8.29□□□□□ -1.08
PFDN4-202ENST00000441080 CDC27P30260 824 aa8.29□□□□□ -1.08
PFDN4-202ENST00000441080 GSTT1P30711 240 aa8.29□□□□□ -1.08
PFDN4-202ENST00000441080 SNRPNP63162 240 aaKnown RBP8.29□□□□□ -1.08
PFDN4-202ENST00000441080 SPRED3Q2MJR0 410 aa8.29□□□□□ -1.08
PFDN4-202ENST00000441080 DTHD1Q6ZMT9 781 aa8.29□□□□□ -1.08
PFDN4-202ENST00000441080 WFDC8Q8IUA0 241 aa8.29□□□□□ -1.08
PFDN4-202ENST00000441080 MRRFQ96E11 262 aaKnown RBP8.29□□□□□ -1.08
PFDN4-202ENST00000441080 USP17L7P0C7H9 530 aa8.28□□□□□ -1.08
PFDN4-202ENST00000441080 NID1P14543 1247 aa8.28□□□□□ -1.08
PFDN4-202ENST00000441080 MSL1Q68DK7 614 aa8.28□□□□□ -1.08
PFDN4-202ENST00000441080 MUC3BQ9H195 1237 aa8.28□□□□□ -1.08
PFDN4-202ENST00000441080 SH2B1Q9NRF2 756 aaPredicted RBP8.28□□□□□ -1.08
PFDN4-202ENST00000441080 SOX13Q9UN79 622 aa8.28□□□□□ -1.08
PFDN4-202ENST00000441080 XRCC5P13010 732 aaKnown RBP8.27□□□□□ -1.09
PFDN4-202ENST00000441080 EPHA1P21709 976 aa8.27□□□□□ -1.09
PFDN4-202ENST00000441080 ITPKAP23677 461 aa8.27□□□□□ -1.09
PFDN4-202ENST00000441080 BAG6P46379 1132 aa8.27□□□□□ -1.09
PFDN4-202ENST00000441080 CABP4P57796 275 aa8.27□□□□□ -1.09
PFDN4-202ENST00000441080 MRPL58Q14197 206 aaKnown RBP8.27□□□□□ -1.09
PFDN4-202ENST00000441080 PODNQ7Z5L7 613 aa8.27□□□□□ -1.09
PFDN4-202ENST00000441080 MKL2Q9ULH7 1088 aa8.27□□□□□ -1.09
PFDN4-202ENST00000441080 GNB5O14775 395 aa8.26□□□□□ -1.09
PFDN4-202ENST00000441080 CDC25BP30305 580 aa8.26□□□□□ -1.09
PFDN4-202ENST00000441080 PTPN12Q05209 780 aaKnown RBP8.26□□□□□ -1.09
PFDN4-202ENST00000441080 COL9A3Q14050 684 aaPredicted RBP8.26□□□□□ -1.09
PFDN4-202ENST00000441080 ADAMTS8Q9UP79 889 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 630.8 ms