RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 TRAF5O00463 557 aa11.02□□□□□ -0.65
HDAC6-209ENST00000440653 HSPA4P34932 840 aa11.02□□□□□ -0.65
HDAC6-209ENST00000440653 CLEC17AQ6ZS10 378 aa11.02□□□□□ -0.65
HDAC6-209ENST00000440653 UBE3BQ7Z3V4 1068 aa11.02□□□□□ -0.65
HDAC6-209ENST00000440653 SLC17A8Q8NDX2 589 aa11.02□□□□□ -0.65
HDAC6-209ENST00000440653 ISY1Q9ULR0 285 aaKnown RBP11.02□□□□□ -0.65
HDAC6-209ENST00000440653 TLL2Q9Y6L7 1015 aa11.02□□□□□ -0.65
HDAC6-209ENST00000440653 CARMIL3Q8ND23 1372 aa11.02□□□□□ -0.65
HDAC6-209ENST00000440653 ABCC12Q96J65 1359 aa11.02□□□□□ -0.65
HDAC6-209ENST00000440653 SCN7AQ01118 1682 aa11.01□□□□□ -0.65
HDAC6-209ENST00000440653 A0A087WZG4 1122 aa11.01□□□□□ -0.65
HDAC6-209ENST00000440653 NBPF26B4DH59 902 aa11.01□□□□□ -0.65
HDAC6-209ENST00000440653 H0YIN7 160 aa11.01□□□□□ -0.65
HDAC6-209ENST00000440653 CD2BP2O95400 341 aaKnown RBP11.01□□□□□ -0.65
HDAC6-209ENST00000440653 STARD3NLO95772 234 aa11.01□□□□□ -0.65
HDAC6-209ENST00000440653 CASP7P55210 303 aa11.01□□□□□ -0.65
HDAC6-209ENST00000440653 HSP90AB3PQ58FF7 597 aa11.01□□□□□ -0.65
HDAC6-209ENST00000440653 NBPF10Q6P3W6 841 aaKnown RBP11.01□□□□□ -0.65
HDAC6-209ENST00000440653 INTS4Q96HW7 963 aaKnown RBP11.01□□□□□ -0.65
HDAC6-209ENST00000440653 TAOK3Q9H2K8 898 aa11.01□□□□□ -0.65
HDAC6-209ENST00000440653 GPR108Q9NPR9 543 aa11.01□□□□□ -0.65
HDAC6-209ENST00000440653 SNRKQ9NRH2 765 aa11.01□□□□□ -0.65
HDAC6-209ENST00000440653 MED23Q9ULK4 1368 aa11.01□□□□□ -0.65
HDAC6-209ENST00000440653 H7C1W4 665 aa11□□□□□ -0.65
HDAC6-209ENST00000440653 SASH1O94885 1247 aa11□□□□□ -0.65
HDAC6-209ENST00000440653 RFX5P48382 616 aaPredicted RBP11□□□□□ -0.65
HDAC6-209ENST00000440653 TRIM28Q13263 835 aaKnown RBP11□□□□□ -0.65
HDAC6-209ENST00000440653 NFIXQ14938 502 aa11□□□□□ -0.65
HDAC6-209ENST00000440653 SKOR2Q2VWA4 1001 aaPredicted RBP11□□□□□ -0.65
HDAC6-209ENST00000440653 USPL1Q5W0Q7 1092 aa11□□□□□ -0.65
HDAC6-209ENST00000440653 ZNF622Q969S3 477 aaKnown RBP eCLIP11□□□□□ -0.652e-7■□□□□ 9.6
HDAC6-209ENST00000440653 PA2G4Q9UQ80 394 aaKnown RBP11□□□□□ -0.65
HDAC6-209ENST00000440653 CDHR2Q9BYE9 1310 aa11□□□□□ -0.65
HDAC6-209ENST00000440653 LTBP3Q9NS15 1303 aa11□□□□□ -0.65
HDAC6-209ENST00000440653 CIAO1O76071 339 aa10.99□□□□□ -0.65
HDAC6-209ENST00000440653 SERPINB2P05120 415 aa10.99□□□□□ -0.65
HDAC6-209ENST00000440653 PNMA8AQ86V59 439 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-209ENST00000440653 LSG1Q9H089 658 aaKnown RBP10.99□□□□□ -0.65
HDAC6-209ENST00000440653 CCDC171Q6TFL3 1326 aa10.99□□□□□ -0.65
HDAC6-209ENST00000440653 DDX60Q8IY21 1712 aaKnown RBP10.98□□□□□ -0.65
HDAC6-209ENST00000440653 NRXN2Q9P2S2 1712 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 TRPM7Q96QT4 1865 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 ATP5JP18859 108 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 IL15P40933 162 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-209ENST00000440653 CRKLP46109 303 aaKnown RBP10.98□□□□□ -0.65
HDAC6-209ENST00000440653 PTPN12Q05209 780 aaKnown RBP10.98□□□□□ -0.65
HDAC6-209ENST00000440653 CUL4AQ13619 759 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 TNNI3KQ59H18 835 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 L1TD1Q5T7N2 865 aaKnown RBP10.98□□□□□ -0.65
HDAC6-209ENST00000440653 SPRYD3Q8NCJ5 442 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 TNPO1Q92973 898 aaKnown RBP10.98□□□□□ -0.65
HDAC6-209ENST00000440653 EAF2Q96CJ1 260 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-209ENST00000440653 ISCA1Q9BUE6 129 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 PLA2G12BQ9BX93 195 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 HMG20BQ9P0W2 317 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 HPS5Q9UPZ3 1129 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 FPGT-TNNI3KV9GXZ4 949 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 MAP3K15Q6ZN16 1313 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 COL6A3P12111 3177 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 CUL9Q8IWT3 2517 aa10.98□□□□□ -0.65
HDAC6-209ENST00000440653 PTCD1O75127 700 aaKnown RBP10.97□□□□□ -0.65
HDAC6-209ENST00000440653 CYP2E1P05181 493 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-209ENST00000440653 NEK4P51957 841 aa10.97□□□□□ -0.65
HDAC6-209ENST00000440653 EPHA10Q5JZY3 1008 aa10.97□□□□□ -0.65
HDAC6-209ENST00000440653 RNF20Q5VTR2 975 aa10.97□□□□□ -0.65
HDAC6-209ENST00000440653 SAPCD2Q86UD0 394 aa10.97□□□□□ -0.65
HDAC6-209ENST00000440653 FSD1Q9BTV5 496 aa10.97□□□□□ -0.65
HDAC6-209ENST00000440653 TM6SF1Q9BZW5 370 aa10.97□□□□□ -0.65
HDAC6-209ENST00000440653 SIL1Q9H173 461 aa10.97□□□□□ -0.65
HDAC6-209ENST00000440653 LAMA4Q16363 1823 aa10.96□□□□□ -0.65
HDAC6-209ENST00000440653 RPAP1Q9BWH6 1393 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-209ENST00000440653 PCCAP05165 728 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-209ENST00000440653 ZKSCAN1P17029 563 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-209ENST00000440653 TCIRG1Q13488 830 aa10.96□□□□□ -0.65
HDAC6-209ENST00000440653 LRRFIP1Q32MZ4 808 aaKnown RBP10.96□□□□□ -0.65
HDAC6-209ENST00000440653 TTLL7Q6ZT98 887 aa10.96□□□□□ -0.65
HDAC6-209ENST00000440653 CCDC24Q8N4L8 307 aa10.96□□□□□ -0.65
HDAC6-209ENST00000440653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDAC6-209ENST00000440653 KCNB2Q92953 911 aa10.96□□□□□ -0.65
HDAC6-209ENST00000440653 SLX4Q8IY92 1834 aa10.95□□□□□ -0.66
HDAC6-209ENST00000440653 SH3TC1Q8TE82 1336 aa10.95□□□□□ -0.66
HDAC6-209ENST00000440653 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
HDAC6-209ENST00000440653 A1BGP04217 495 aa10.95□□□□□ -0.66
HDAC6-209ENST00000440653 PDIA4P13667 645 aaKnown RBP10.95□□□□□ -0.66
HDAC6-209ENST00000440653 IL6STP40189 918 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-209ENST00000440653 PIP4K2AP48426 406 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-209ENST00000440653 FOXO4P98177 505 aa10.95□□□□□ -0.66
HDAC6-209ENST00000440653 INTS5Q6P9B9 1019 aaKnown RBP10.95□□□□□ -0.66
HDAC6-209ENST00000440653 LMBR1LQ6UX01 489 aa10.95□□□□□ -0.66
HDAC6-209ENST00000440653 CWC27Q6UX04 472 aaKnown RBP10.95□□□□□ -0.66
HDAC6-209ENST00000440653 GIGYF2Q6Y7W6 1299 aaKnown RBP10.95□□□□□ -0.66
HDAC6-209ENST00000440653 TMX3Q96JJ7 454 aa10.95□□□□□ -0.66
HDAC6-209ENST00000440653 ZBTB3Q9H5J0 574 aa10.95□□□□□ -0.66
HDAC6-209ENST00000440653 DBNLQ9UJU6 430 aaKnown RBP10.95□□□□□ -0.66
HDAC6-209ENST00000440653 PALD1Q9ULE6 856 aa10.95□□□□□ -0.66
HDAC6-209ENST00000440653 COLQQ9Y215 455 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-209ENST00000440653 ANKRD31Q8N7Z5 1873 aa10.95□□□□□ -0.66
HDAC6-209ENST00000440653 DOCK2Q92608 1830 aa10.95□□□□□ -0.66
HDAC6-209ENST00000440653 A0A1B0GUL6 1792 aa10.95□□□□□ -0.66
HDAC6-209ENST00000440653 RIC1Q4ADV7 1423 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms