RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 PNMA6EA0A0J9YXQ4 647 aa22.48■■□□□ 1.19
CPSF4-205ENST00000440514 ATG9AQ7Z3C6 839 aa22.48■■□□□ 1.19
CPSF4-205ENST00000440514 VGLL2Q8N8G2 317 aa22.48■■□□□ 1.19
CPSF4-205ENST00000440514 TAF1DQ9H5J8 278 aaPredicted RBP22.48■■□□□ 1.19
CPSF4-205ENST00000440514 TOMM70O94826 608 aa22.47■■□□□ 1.19
CPSF4-205ENST00000440514 POTEIP0CG38 1075 aa22.47■■□□□ 1.19
CPSF4-205ENST00000440514 POTEJP0CG39 1038 aa22.47■■□□□ 1.19
CPSF4-205ENST00000440514 LMOD1P29536 600 aaPredicted RBP22.47■■□□□ 1.19
CPSF4-205ENST00000440514 C1QTNF8P60827 252 aa22.47■■□□□ 1.19
CPSF4-205ENST00000440514 C15orf52Q6ZUT6 534 aaKnown RBP22.47■■□□□ 1.19
CPSF4-205ENST00000440514 COA1Q9GZY4 146 aa22.47■■□□□ 1.19
CPSF4-205ENST00000440514 ZBTB12Q9Y330 459 aaPredicted RBP22.47■■□□□ 1.19
CPSF4-205ENST00000440514 ADAMTSL1Q8N6G6 1762 aa22.47■■□□□ 1.19
CPSF4-205ENST00000440514 EPHX2P34913 555 aa22.46■■□□□ 1.19
CPSF4-205ENST00000440514 EPS15P42566 896 aa22.46■■□□□ 1.19
CPSF4-205ENST00000440514 COPRSQ9NQ92 184 aa22.46■■□□□ 1.19
CPSF4-205ENST00000440514 CIAO1O76071 339 aa22.45■■□□□ 1.18
CPSF4-205ENST00000440514 PDE8BO95263 885 aa22.45■■□□□ 1.18
CPSF4-205ENST00000440514 UBE4AQ14139 1066 aa22.45■■□□□ 1.18
CPSF4-205ENST00000440514 PODNQ7Z5L7 613 aa22.45■■□□□ 1.18
CPSF4-205ENST00000440514 RBM46Q8TBY0 533 aaKnown RBP22.45■■□□□ 1.18
CPSF4-205ENST00000440514 GPRC5DQ9NZD1 345 aa22.45■■□□□ 1.18
CPSF4-205ENST00000440514 DDX19BQ9UMR2 479 aa22.45■■□□□ 1.18
CPSF4-205ENST00000440514 SHTN1A0MZ66 631 aa22.44■■□□□ 1.18
CPSF4-205ENST00000440514 PDE3AQ14432 1141 aa22.44■■□□□ 1.18
CPSF4-205ENST00000440514 EAPPQ56P03 285 aaPredicted RBP22.44■■□□□ 1.18
CPSF4-205ENST00000440514 FBXW7Q969H0 707 aa22.44■■□□□ 1.18
CPSF4-205ENST00000440514 GYG1P46976 350 aa22.43■■□□□ 1.18
CPSF4-205ENST00000440514 RRP1P56182 461 aaKnown RBP22.43■■□□□ 1.18
CPSF4-205ENST00000440514 ZNF804AQ7Z570 1209 aa22.43■■□□□ 1.18
CPSF4-205ENST00000440514 CD209Q9NNX6 404 aa22.43■■□□□ 1.18
CPSF4-205ENST00000440514 FBXO3Q9UK99 471 aa22.43■■□□□ 1.18
CPSF4-205ENST00000440514 ARAP2Q8WZ64 1704 aa22.43■■□□□ 1.18
CPSF4-205ENST00000440514 USP17L3A6NCW0 530 aa22.42■■□□□ 1.18
CPSF4-205ENST00000440514 USP17L4A6NCW7 530 aa22.42■■□□□ 1.18
CPSF4-205ENST00000440514 VIL1P09327 827 aaKnown RBP22.42■■□□□ 1.18
CPSF4-205ENST00000440514 IL15P40933 162 aaPredicted RBP22.42■■□□□ 1.18
CPSF4-205ENST00000440514 PUM3Q15397 648 aaKnown RBP22.42■■□□□ 1.18
CPSF4-205ENST00000440514 USP17L1Q7RTZ2 530 aa22.42■■□□□ 1.18
CPSF4-205ENST00000440514 ZNF609O15014 1411 aa22.41■■□□□ 1.18
CPSF4-205ENST00000440514 FGFR2P21802 821 aa22.41■■□□□ 1.18
CPSF4-205ENST00000440514 ATP8B2P98198 1209 aa22.41■■□□□ 1.18
CPSF4-205ENST00000440514 POLA2Q14181 598 aa22.41■■□□□ 1.18
CPSF4-205ENST00000440514 CEP85Q6P2H3 762 aa22.41■■□□□ 1.18
CPSF4-205ENST00000440514 RSBN1LQ6PCB5 846 aaPredicted RBP22.41■■□□□ 1.18
CPSF4-205ENST00000440514 MICALL2Q8IY33 904 aa22.41■■□□□ 1.18
CPSF4-205ENST00000440514 MXD3Q9BW11 206 aa22.41■■□□□ 1.18
CPSF4-205ENST00000440514 RPS12P25398 132 aaKnown RBP22.4■■□□□ 1.18
CPSF4-205ENST00000440514 DACT2Q5SW24 774 aa22.4■■□□□ 1.18
CPSF4-205ENST00000440514 SMC1BQ8NDV3 1235 aa22.4■■□□□ 1.18
CPSF4-205ENST00000440514 SSH3Q8TE77 659 aa22.4■■□□□ 1.18
CPSF4-205ENST00000440514 FAM84BQ96KN1 310 aaPredicted RBP22.4■■□□□ 1.18
CPSF4-205ENST00000440514 CEP126Q9P2H0 1117 aa22.4■■□□□ 1.18
CPSF4-205ENST00000440514 CNOT7Q9UIV1 285 aaKnown RBP22.4■■□□□ 1.18
CPSF4-205ENST00000440514 GTF2IP78347 998 aa22.39■■□□□ 1.17
CPSF4-205ENST00000440514 ATP2B3Q16720 1220 aa22.39■■□□□ 1.17
CPSF4-205ENST00000440514 DPF2Q92785 391 aa22.39■■□□□ 1.17
CPSF4-205ENST00000440514 ADARB2Q9NS39 739 aaKnown RBP22.39■■□□□ 1.17
CPSF4-205ENST00000440514 ZBTB40Q9NUA8 1239 aa22.39■■□□□ 1.17
CPSF4-205ENST00000440514 SLC5A1P13866 664 aa22.38■■□□□ 1.17
CPSF4-205ENST00000440514 IL1R1P14778 569 aa22.38■■□□□ 1.17
CPSF4-205ENST00000440514 HIBADHP31937 336 aaKnown RBP22.38■■□□□ 1.17
CPSF4-205ENST00000440514 STRIP1Q5VSL9 837 aa22.38■■□□□ 1.17
CPSF4-205ENST00000440514 PNMA8AQ86V59 439 aaPredicted RBP22.38■■□□□ 1.17
CPSF4-205ENST00000440514 LDHDQ86WU2 507 aa22.38■■□□□ 1.17
CPSF4-205ENST00000440514 TRPM4Q8TD43 1214 aa22.38■■□□□ 1.17
CPSF4-205ENST00000440514 JAG2Q9Y219 1238 aa22.38■■□□□ 1.17
CPSF4-205ENST00000440514 IFIT1P09914 478 aaKnown RBP22.37■■□□□ 1.17
CPSF4-205ENST00000440514 TFCP2Q12800 502 aa22.37■■□□□ 1.17
CPSF4-205ENST00000440514 FSTL1Q12841 308 aa22.37■■□□□ 1.17
CPSF4-205ENST00000440514 CHADLQ6NUI6 762 aa22.37■■□□□ 1.17
CPSF4-205ENST00000440514 LPIN2Q92539 896 aa22.37■■□□□ 1.17
CPSF4-205ENST00000440514 GMLQ99445 158 aa22.37■■□□□ 1.17
CPSF4-205ENST00000440514 IQSEC3Q9UPP2 1182 aaPredicted RBP22.37■■□□□ 1.17
CPSF4-205ENST00000440514 CLEC11AQ9Y240 323 aa22.37■■□□□ 1.17
CPSF4-205ENST00000440514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.37■■□□□ 1.17
CPSF4-205ENST00000440514 H7C1D1 291 aa22.36■■□□□ 1.17
CPSF4-205ENST00000440514 TTLL5Q6EMB2 1281 aa22.36■■□□□ 1.17
CPSF4-205ENST00000440514 USP50Q70EL3 339 aaPredicted RBP22.36■■□□□ 1.17
CPSF4-205ENST00000440514 AGBL3Q8NEM8 1001 aa22.36■■□□□ 1.17
CPSF4-205ENST00000440514 MYH13Q9UKX3 1938 aa22.35■■□□□ 1.17
CPSF4-205ENST00000440514 EGFRP00533 1210 aa22.35■■□□□ 1.17
CPSF4-205ENST00000440514 BCAMP50895 628 aa22.35■■□□□ 1.17
CPSF4-205ENST00000440514 G3BP1Q13283 466 aaKnown RBP eCLIP22.35■■□□□ 1.17
CPSF4-205ENST00000440514 TBC1D10BQ4KMP7 808 aaPredicted RBP22.35■■□□□ 1.17
CPSF4-205ENST00000440514 CAVIN4Q5BKX8 364 aa22.35■■□□□ 1.17
CPSF4-205ENST00000440514 SAMD7Q7Z3H4 446 aa22.35■■□□□ 1.17
CPSF4-205ENST00000440514 FBXO33Q7Z6M2 555 aa22.35■■□□□ 1.17
CPSF4-205ENST00000440514 VPS37DQ86XT2 251 aa22.35■■□□□ 1.17
CPSF4-205ENST00000440514 TDRD7Q8NHU6 1098 aaKnown RBP22.35■■□□□ 1.17
CPSF4-205ENST00000440514 CERS5Q8N5B7 392 aa22.34■■□□□ 1.17
CPSF4-205ENST00000440514 CHMP4BQ9H444 224 aaKnown RBP22.34■■□□□ 1.17
CPSF4-205ENST00000440514 MYO3BQ8WXR4 1341 aa22.33■■□□□ 1.17
CPSF4-205ENST00000440514 SURF6O75683 361 aaKnown RBP22.33■■□□□ 1.17
CPSF4-205ENST00000440514 SASH1O94885 1247 aa22.33■■□□□ 1.17
CPSF4-205ENST00000440514 ADORA1P30542 326 aa22.33■■□□□ 1.17
CPSF4-205ENST00000440514 HIRAP54198 1017 aaPredicted RBP22.33■■□□□ 1.17
CPSF4-205ENST00000440514 OS9Q13438 667 aaPredicted RBP22.33■■□□□ 1.17
CPSF4-205ENST00000440514 MAP1SQ66K74 1059 aaPredicted RBP22.33■■□□□ 1.17
CPSF4-205ENST00000440514 COL1A1P02452 1464 aaPredicted RBP22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms