RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 MYO1BO43795 1136 aa23.6■■□□□ 1.37
FMR1-208ENST00000440235 SPA17Q15506 151 aa23.6■■□□□ 1.37
FMR1-208ENST00000440235 USP19O94966 1318 aa23.6■■□□□ 1.37
FMR1-208ENST00000440235 MCMDC2Q4G0Z9 681 aa23.6■■□□□ 1.37
FMR1-208ENST00000440235 CTDP1Q9Y5B0 961 aaPredicted RBP23.6■■□□□ 1.37
FMR1-208ENST00000440235 BRD1O95696 1058 aa23.59■■□□□ 1.37
FMR1-208ENST00000440235 NEFHP12036 1026 aa23.59■■□□□ 1.37
FMR1-208ENST00000440235 C10orf67Q8IYJ2 551 aa23.59■■□□□ 1.37
FMR1-208ENST00000440235 NLRP5P59047 1200 aa23.59■■□□□ 1.37
FMR1-208ENST00000440235 CACNA2D4Q7Z3S7 1137 aa23.59■■□□□ 1.37
FMR1-208ENST00000440235 WASF1Q92558 559 aa23.59■■□□□ 1.37
FMR1-208ENST00000440235 UBA5Q9GZZ9 404 aa23.59■■□□□ 1.37
FMR1-208ENST00000440235 HMG20BQ9P0W2 317 aa23.59■■□□□ 1.37
FMR1-208ENST00000440235 HLTFQ14527 1009 aaKnown RBP eCLIP23.59■■□□□ 1.37
FMR1-208ENST00000440235 PRR36Q9H6K5 1346 aa23.59■■□□□ 1.37
FMR1-208ENST00000440235 UNC5CLQ8IV45 518 aa23.59■■□□□ 1.37
FMR1-208ENST00000440235 NCOA7Q8NI08 942 aa23.59■■□□□ 1.37
FMR1-208ENST00000440235 AKAP2Q9Y2D5 859 aa23.59■■□□□ 1.37
FMR1-208ENST00000440235 TFCP2Q12800 502 aa23.58■■□□□ 1.37
FMR1-208ENST00000440235 ALKQ9UM73 1620 aa23.58■■□□□ 1.37
FMR1-208ENST00000440235 A2ML1A8K2U0 1454 aa23.58■■□□□ 1.36
FMR1-208ENST00000440235 SGSM2O43147 1006 aa23.58■■□□□ 1.36
FMR1-208ENST00000440235 BICC1Q9H694 974 aaKnown RBP23.58■■□□□ 1.36
FMR1-208ENST00000440235 MTIF2P46199 727 aaKnown RBP23.57■■□□□ 1.36
FMR1-208ENST00000440235 DHX58Q96C10 678 aa23.57■■□□□ 1.36
FMR1-208ENST00000440235 RTL1A6NKG5 1358 aa23.57■■□□□ 1.36
FMR1-208ENST00000440235 PRC1O43663 620 aa23.57■■□□□ 1.36
FMR1-208ENST00000440235 CCDC150Q8NCX0 1101 aa23.57■■□□□ 1.36
FMR1-208ENST00000440235 KCNA6P17658 529 aa23.57■■□□□ 1.36
FMR1-208ENST00000440235 SPTY2D1Q68D10 685 aaPredicted RBP23.57■■□□□ 1.36
FMR1-208ENST00000440235 KSR2Q6VAB6 950 aa23.57■■□□□ 1.36
FMR1-208ENST00000440235 KCNH5Q8NCM2 988 aa23.57■■□□□ 1.36
FMR1-208ENST00000440235 CTCFLQ8NI51 663 aaPredicted RBP23.57■■□□□ 1.36
FMR1-208ENST00000440235 CAPZA3Q96KX2 299 aa23.57■■□□□ 1.36
FMR1-208ENST00000440235 NUTM2BA6NNL0 878 aaPredicted RBP23.56■■□□□ 1.36
FMR1-208ENST00000440235 NUTM2EB1AL46 878 aaPredicted RBP23.56■■□□□ 1.36
FMR1-208ENST00000440235 NUTM2AQ8IVF1 878 aaPredicted RBP23.56■■□□□ 1.36
FMR1-208ENST00000440235 MAP3K12Q12852 859 aa23.56■■□□□ 1.36
FMR1-208ENST00000440235 AMOTQ4VCS5 1084 aa23.56■■□□□ 1.36
FMR1-208ENST00000440235 CTR9Q6PD62 1173 aa23.56■■□□□ 1.36
FMR1-208ENST00000440235 NFATC2IPQ8NCF5 419 aa23.56■■□□□ 1.36
FMR1-208ENST00000440235 CAPN2P17655 700 aa23.56■■□□□ 1.36
FMR1-208ENST00000440235 ZKSCAN3Q9BRR0 538 aa23.56■■□□□ 1.36
FMR1-208ENST00000440235 GBP3Q9H0R5 595 aa23.56■■□□□ 1.36
FMR1-208ENST00000440235 CEP131Q9UPN4 1083 aa23.56■■□□□ 1.36
FMR1-208ENST00000440235 MYOM1P52179 1685 aa23.56■■□□□ 1.36
FMR1-208ENST00000440235 ANKRD24Q8TF21 1146 aa23.56■■□□□ 1.36
FMR1-208ENST00000440235 PLIN2Q99541 437 aa23.55■■□□□ 1.36
FMR1-208ENST00000440235 SLC9C2Q5TAH2 1124 aa23.55■■□□□ 1.36
FMR1-208ENST00000440235 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.55■■□□□ 1.36
FMR1-208ENST00000440235 PTPRMP28827 1452 aa23.55■■□□□ 1.36
FMR1-208ENST00000440235 ZBTB43O43298 467 aa23.55■■□□□ 1.36
FMR1-208ENST00000440235 ZNF397Q8NF99 534 aaPredicted RBP23.55■■□□□ 1.36
FMR1-208ENST00000440235 MKNK2Q9HBH9 465 aa23.55■■□□□ 1.36
FMR1-208ENST00000440235 LGR6Q9HBX8 967 aa23.55■■□□□ 1.36
FMR1-208ENST00000440235 ROBO2Q9HCK4 1378 aa23.55■■□□□ 1.36
FMR1-208ENST00000440235 PIK3C2BO00750 1634 aa23.54■■□□□ 1.36
FMR1-208ENST00000440235 PTPN21Q16825 1174 aa23.54■■□□□ 1.36
FMR1-208ENST00000440235 NRBP1Q9UHY1 535 aa23.54■■□□□ 1.36
FMR1-208ENST00000440235 IGHMBP2P38935 993 aaKnown RBP23.54■■□□□ 1.36
FMR1-208ENST00000440235 PPP1R9BQ96SB3 815 aa23.54■■□□□ 1.36
FMR1-208ENST00000440235 DBNDD2Q9BQY9 259 aa23.54■■□□□ 1.36
FMR1-208ENST00000440235 PYCARDQ9ULZ3 195 aa23.54■■□□□ 1.36
FMR1-208ENST00000440235 YEATS4O95619 227 aa23.54■■□□□ 1.36
FMR1-208ENST00000440235 CABLES1Q8TDN4 633 aa23.54■■□□□ 1.36
FMR1-208ENST00000440235 TAF4BQ92750 862 aa23.54■■□□□ 1.36
FMR1-208ENST00000440235 CARD6Q9BX69 1037 aa23.54■■□□□ 1.36
FMR1-208ENST00000440235 TTC21AQ8NDW8 1320 aa23.54■■□□□ 1.36
FMR1-208ENST00000440235 CAVIN2O95810 425 aa23.53■■□□□ 1.36
FMR1-208ENST00000440235 VPS18Q9P253 973 aa23.53■■□□□ 1.36
FMR1-208ENST00000440235 LEO1Q8WVC0 666 aaPredicted RBP23.53■■□□□ 1.36
FMR1-208ENST00000440235 MAPK8IP1Q9UQF2 711 aa23.53■■□□□ 1.36
FMR1-208ENST00000440235 PTH1RQ03431 593 aa23.53■■□□□ 1.36
FMR1-208ENST00000440235 ME3Q16798 604 aa23.53■■□□□ 1.36
FMR1-208ENST00000440235 RASEFQ8IZ41 740 aa23.53■■□□□ 1.36
FMR1-208ENST00000440235 KCNG4Q8TDN1 519 aa23.53■■□□□ 1.36
FMR1-208ENST00000440235 IQCA1Q86XH1 822 aa23.53■■□□□ 1.36
FMR1-208ENST00000440235 PPLO60437 1756 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 ATP7BP35670 1465 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 CCDC196A0A1B0GTZ2 297 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 SYCP1Q15431 976 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 RRAGBQ5VZM2 374 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 LINS1Q8NG48 757 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 CWC25Q9NXE8 425 aaPredicted RBP23.52■■□□□ 1.36
FMR1-208ENST00000440235 SHTN1A0MZ66 631 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 SLC27A2O14975 620 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 CCDC178Q5BJE1 867 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 CHL1O00533 1208 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 UBA7P41226 1012 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 EVCP57679 992 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 LUC7LQ9NQ29 371 aaKnown RBP23.52■■□□□ 1.36
FMR1-208ENST00000440235 GUCA1BQ9UMX6 200 aa23.52■■□□□ 1.36
FMR1-208ENST00000440235 CCDC194A0A1B0GVG4 234 aa23.51■■□□□ 1.35
FMR1-208ENST00000440235 LONRF3Q496Y0 759 aa23.51■■□□□ 1.35
FMR1-208ENST00000440235 ZSCAN29Q8IWY8 852 aaPredicted RBP23.51■■□□□ 1.35
FMR1-208ENST00000440235 NEURL4Q96JN8 1562 aa23.51■■□□□ 1.35
FMR1-208ENST00000440235 TRIM21P19474 475 aaKnown RBP23.51■■□□□ 1.35
FMR1-208ENST00000440235 PAFAH1B1P43034 410 aa23.51■■□□□ 1.35
FMR1-208ENST00000440235 ZNF75DP51815 510 aa23.51■■□□□ 1.35
FMR1-208ENST00000440235 BMP2KQ9NSY1 1161 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms