RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CNNM1Q9NRU3 951 aa25.05■■□□□ 1.6
SHROOM1-204ENST00000440118 RASSF10A6NK89 507 aa25.04■■□□□ 1.6
SHROOM1-204ENST00000440118 EPHA10Q5JZY3 1008 aa25.04■■□□□ 1.6
SHROOM1-204ENST00000440118 PGAP2Q9UHJ9 254 aa25.04■■□□□ 1.6
SHROOM1-204ENST00000440118 ZNF609O15014 1411 aa25.03■■□□□ 1.6
SHROOM1-204ENST00000440118 ALDH1L2Q3SY69 923 aa25.03■■□□□ 1.6
SHROOM1-204ENST00000440118 AIDAQ96BJ3 306 aa25.03■■□□□ 1.6
SHROOM1-204ENST00000440118 EGFRP00533 1210 aa25.02■■□□□ 1.6
SHROOM1-204ENST00000440118 USP17L8P0C7I0 530 aa25.02■■□□□ 1.6
SHROOM1-204ENST00000440118 LDHAL6AQ6ZMR3 332 aa25.02■■□□□ 1.6
SHROOM1-204ENST00000440118 KRT26Q7Z3Y9 468 aa25.02■■□□□ 1.6
SHROOM1-204ENST00000440118 USP48Q86UV5 1035 aa25.02■■□□□ 1.6
SHROOM1-204ENST00000440118 TAF5LO75529 589 aa25.01■■□□□ 1.59
SHROOM1-204ENST00000440118 KLRK1P26718 216 aa25.01■■□□□ 1.59
SHROOM1-204ENST00000440118 ECE1P42892 770 aa25.01■■□□□ 1.59
SHROOM1-204ENST00000440118 HELBQ8NG08 1087 aaPredicted RBP25.01■■□□□ 1.59
SHROOM1-204ENST00000440118 SUCLG2Q96I99 432 aa25.01■■□□□ 1.59
SHROOM1-204ENST00000440118 ZNF594Q96JF6 807 aaPredicted RBP25.01■■□□□ 1.59
SHROOM1-204ENST00000440118 GGA3Q9NZ52 723 aa25.01■■□□□ 1.59
SHROOM1-204ENST00000440118 MYO3BQ8WXR4 1341 aa25.01■■□□□ 1.59
SHROOM1-204ENST00000440118 PLIN1O60240 522 aa25■■□□□ 1.59
SHROOM1-204ENST00000440118 CT47B1P0C2W7 299 aaPredicted RBP25■■□□□ 1.59
SHROOM1-204ENST00000440118 NBPF7P0C2Y1 421 aaPredicted RBP25■■□□□ 1.59
SHROOM1-204ENST00000440118 CST9Q5W186 159 aa25■■□□□ 1.59
SHROOM1-204ENST00000440118 TXNRD3Q86VQ6 643 aa25■■□□□ 1.59
SHROOM1-204ENST00000440118 SULF1Q8IWU6 871 aa25■■□□□ 1.59
SHROOM1-204ENST00000440118 ZNF646O15015 1829 aaPredicted RBP25■■□□□ 1.59
SHROOM1-204ENST00000440118 DIEXFQ68CQ4 756 aaKnown RBP24.99■■□□□ 1.59
SHROOM1-204ENST00000440118 OGFOD1Q8N543 542 aa24.99■■□□□ 1.59
SHROOM1-204ENST00000440118 WDR33Q9C0J8 1336 aaKnown RBP24.99■■□□□ 1.59
SHROOM1-204ENST00000440118 TLL2Q9Y6L7 1015 aa24.99■■□□□ 1.59
SHROOM1-204ENST00000440118 ZNF280AP59817 542 aaPredicted RBP24.98■■□□□ 1.59
SHROOM1-204ENST00000440118 STRIP1Q5VSL9 837 aa24.98■■□□□ 1.59
SHROOM1-204ENST00000440118 ZNF804AQ7Z570 1209 aa24.98■■□□□ 1.59
SHROOM1-204ENST00000440118 CAPNS2Q96L46 248 aa24.98■■□□□ 1.59
SHROOM1-204ENST00000440118 MYOZ2Q9NPC6 264 aa24.98■■□□□ 1.59
SHROOM1-204ENST00000440118 ADM5C9JUS6 153 aa24.97■■□□□ 1.59
SHROOM1-204ENST00000440118 DACT2Q5SW24 774 aa24.97■■□□□ 1.59
SHROOM1-204ENST00000440118 BICC1Q9H694 974 aaKnown RBP24.97■■□□□ 1.59
SHROOM1-204ENST00000440118 UTYO14607 1347 aa24.96■■□□□ 1.59
SHROOM1-204ENST00000440118 TTLL5Q6EMB2 1281 aa24.96■■□□□ 1.59
SHROOM1-204ENST00000440118 CYP4F22Q6NT55 531 aa24.96■■□□□ 1.59
SHROOM1-204ENST00000440118 TRMT2AQ8IZ69 625 aaKnown RBP24.96■■□□□ 1.59
SHROOM1-204ENST00000440118 MXD3Q9BW11 206 aa24.96■■□□□ 1.59
SHROOM1-204ENST00000440118 SNAP23O00161 211 aa24.95■■□□□ 1.58
SHROOM1-204ENST00000440118 GTF2IP78347 998 aa24.95■■□□□ 1.58
SHROOM1-204ENST00000440118 SCARF1Q14162 830 aa24.95■■□□□ 1.58
SHROOM1-204ENST00000440118 ANGEL2Q5VTE6 544 aaKnown RBP24.95■■□□□ 1.58
SHROOM1-204ENST00000440118 GMLQ99445 158 aa24.95■■□□□ 1.58
SHROOM1-204ENST00000440118 THSD7BQ9C0I4 1608 aa24.94■■□□□ 1.58
SHROOM1-204ENST00000440118 SAPCD2Q86UD0 394 aa24.94■■□□□ 1.58
SHROOM1-204ENST00000440118 CD209Q9NNX6 404 aa24.94■■□□□ 1.58
SHROOM1-204ENST00000440118 HDAC9Q9UKV0 1011 aa24.94■■□□□ 1.58
SHROOM1-204ENST00000440118 ASTN2O75129 1339 aaPredicted RBP24.93■■□□□ 1.58
SHROOM1-204ENST00000440118 KAZALD1Q96I82 304 aa24.93■■□□□ 1.58
SHROOM1-204ENST00000440118 MAP2K1Q02750 393 aaPredicted RBP24.92■■□□□ 1.58
SHROOM1-204ENST00000440118 COL13A1Q5TAT6 717 aaPredicted RBP24.92■■□□□ 1.58
SHROOM1-204ENST00000440118 DLK2Q6UY11 383 aa24.92■■□□□ 1.58
SHROOM1-204ENST00000440118 KIAA0825Q8IV33 1275 aa24.92■■□□□ 1.58
SHROOM1-204ENST00000440118 MIER1Q8N108 512 aa24.92■■□□□ 1.58
SHROOM1-204ENST00000440118 BEGAINQ9BUH8 593 aa24.92■■□□□ 1.58
SHROOM1-204ENST00000440118 API5Q9BZZ5 524 aaKnown RBP24.92■■□□□ 1.58
SHROOM1-204ENST00000440118 NOB1Q9ULX3 412 aaKnown RBP24.92■■□□□ 1.58
SHROOM1-204ENST00000440118 MROH5Q6ZUA9 1318 aa24.91■■□□□ 1.58
SHROOM1-204ENST00000440118 HUNKP57058 714 aa24.91■■□□□ 1.58
SHROOM1-204ENST00000440118 RABL6Q3YEC7 729 aaPredicted RBP24.91■■□□□ 1.58
SHROOM1-204ENST00000440118 C15orf52Q6ZUT6 534 aaKnown RBP24.91■■□□□ 1.58
SHROOM1-204ENST00000440118 C2orf69Q8N8R5 385 aa24.91■■□□□ 1.58
SHROOM1-204ENST00000440118 GBA2Q9HCG7 927 aaPredicted RBP24.91■■□□□ 1.58
SHROOM1-204ENST00000440118 KIF16BQ96L93 1317 aa24.9■■□□□ 1.58
SHROOM1-204ENST00000440118 FOXN1O15353 648 aa24.9■■□□□ 1.58
SHROOM1-204ENST00000440118 ANKRD44Q8N8A2 993 aa24.9■■□□□ 1.58
SHROOM1-204ENST00000440118 USP44Q9H0E7 712 aa24.9■■□□□ 1.58
SHROOM1-204ENST00000440118 CTCFP49711 727 aaPredicted RBP24.89■■□□□ 1.58
SHROOM1-204ENST00000440118 METTL24Q5JXM2 366 aa24.89■■□□□ 1.58
SHROOM1-204ENST00000440118 CDCA5Q96FF9 252 aa24.89■■□□□ 1.58
SHROOM1-204ENST00000440118 HHIPL1Q96JK4 782 aa24.89■■□□□ 1.58
SHROOM1-204ENST00000440118 PUS3Q9BZE2 481 aaKnown RBP24.89■■□□□ 1.58
SHROOM1-204ENST00000440118 PITPNM2Q9BZ72 1349 aa24.88■■□□□ 1.57
SHROOM1-204ENST00000440118 SASH1O94885 1247 aa24.88■■□□□ 1.57
SHROOM1-204ENST00000440118 UBTFL1P0CB47 393 aaPredicted RBP24.88■■□□□ 1.57
SHROOM1-204ENST00000440118 MMP14P50281 582 aa24.88■■□□□ 1.57
SHROOM1-204ENST00000440118 HNRNPUQ00839 825 aaKnown RBP eCLIP24.88■■□□□ 1.57
SHROOM1-204ENST00000440118 UBE4AQ14139 1066 aa24.88■■□□□ 1.57
SHROOM1-204ENST00000440118 IRS2Q9Y4H2 1338 aa24.87■■□□□ 1.57
SHROOM1-204ENST00000440118 NBPF9Q3BBW0 867 aa24.87■■□□□ 1.57
SHROOM1-204ENST00000440118 VPS37DQ86XT2 251 aa24.87■■□□□ 1.57
SHROOM1-204ENST00000440118 TNS4Q8IZW8 715 aa24.87■■□□□ 1.57
SHROOM1-204ENST00000440118 WBP1LQ9NX94 342 aa24.87■■□□□ 1.57
SHROOM1-204ENST00000440118 JAG2Q9Y219 1238 aa24.87■■□□□ 1.57
SHROOM1-204ENST00000440118 ECM29Q5VYK3 1845 aa24.86■■□□□ 1.57
SHROOM1-204ENST00000440118 F8W031 263 aaPredicted RBP24.86■■□□□ 1.57
SHROOM1-204ENST00000440118 AOC2O75106 756 aa24.86■■□□□ 1.57
SHROOM1-204ENST00000440118 IL1R1P14778 569 aa24.86■■□□□ 1.57
SHROOM1-204ENST00000440118 RARSP54136 660 aaKnown RBP24.86■■□□□ 1.57
SHROOM1-204ENST00000440118 ARAP2Q8WZ64 1704 aa24.86■■□□□ 1.57
SHROOM1-204ENST00000440118 WNT10BO00744 389 aa24.85■■□□□ 1.57
SHROOM1-204ENST00000440118 HDAC5Q9UQL6 1122 aa24.85■■□□□ 1.57
SHROOM1-204ENST00000440118 HIBADHP31937 336 aaKnown RBP24.84■■□□□ 1.57
SHROOM1-204ENST00000440118 MAP2K2P36507 400 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 1090.8 ms