RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 FANCCQ00597 558 aa16.65■□□□□ 0.26
PCNX1-202ENST00000439984 TERF2Q15554 542 aa16.65■□□□□ 0.26
PCNX1-202ENST00000439984 MRPL50Q8N5N7 158 aaKnown RBP16.65■□□□□ 0.26
PCNX1-202ENST00000439984 AKR1B15C9JRZ8 316 aaPredicted RBP16.65■□□□□ 0.26
PCNX1-202ENST00000439984 KANK3Q6NY19 840 aa16.65■□□□□ 0.26
PCNX1-202ENST00000439984 UBLCP1Q8WVY7 318 aaPredicted RBP16.65■□□□□ 0.26
PCNX1-202ENST00000439984 SLC26A6Q9BXS9 759 aa16.65■□□□□ 0.26
PCNX1-202ENST00000439984 NLRP2Q9NX02 1062 aa16.65■□□□□ 0.26
PCNX1-202ENST00000439984 IFIT1P09914 478 aaKnown RBP16.65■□□□□ 0.26
PCNX1-202ENST00000439984 GPR161Q8N6U8 529 aaKnown RBP16.65■□□□□ 0.26
PCNX1-202ENST00000439984 PDE11AQ9HCR9 933 aa16.65■□□□□ 0.26
PCNX1-202ENST00000439984 COL17A1Q9UMD9 1497 aaPredicted RBP16.64■□□□□ 0.25
PCNX1-202ENST00000439984 VIMP08670 466 aaKnown RBP16.64■□□□□ 0.25
PCNX1-202ENST00000439984 CHMLP26374 656 aa16.64■□□□□ 0.25
PCNX1-202ENST00000439984 CCDC122Q5T0U0 273 aa16.64■□□□□ 0.25
PCNX1-202ENST00000439984 DCTPP1Q9H773 170 aa16.64■□□□□ 0.25
PCNX1-202ENST00000439984 HMG20BQ9P0W2 317 aa16.64■□□□□ 0.25
PCNX1-202ENST00000439984 UBA5Q9GZZ9 404 aa16.64■□□□□ 0.25
PCNX1-202ENST00000439984 BTBD11A6QL63 1104 aa16.64■□□□□ 0.25
PCNX1-202ENST00000439984 MXRA7P84157 204 aa16.64■□□□□ 0.25
PCNX1-202ENST00000439984 CEP85LQ5SZL2 805 aa16.64■□□□□ 0.25
PCNX1-202ENST00000439984 KIAA0753Q2KHM9 967 aa16.64■□□□□ 0.25
PCNX1-202ENST00000439984 ANKRD65E5RJM6 399 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 MYL5Q02045 173 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 EIF2AK4Q9P2K8 1649 aaKnown RBP16.63■□□□□ 0.25
PCNX1-202ENST00000439984 KLF18A0A0U1RQI7 1052 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 SPTY2D1Q68D10 685 aaPredicted RBP16.63■□□□□ 0.25
PCNX1-202ENST00000439984 CTDP1Q9Y5B0 961 aaPredicted RBP16.63■□□□□ 0.25
PCNX1-202ENST00000439984 ANKRD36BQ8N2N9 1353 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 ATP2B2Q01814 1243 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 TTC19Q6DKK2 380 aaPredicted RBP16.63■□□□□ 0.25
PCNX1-202ENST00000439984 RPSAP08865 295 aaKnown RBP16.63■□□□□ 0.25
PCNX1-202ENST00000439984 GNGT1P63211 74 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 KRT83P78385 493 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 ATP11AP98196 1134 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 IFIT3O14879 490 aaKnown RBP16.63■□□□□ 0.25
PCNX1-202ENST00000439984 METAP2P50579 478 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCNX1-202ENST00000439984 PLEKHO1Q53GL0 409 aaPredicted RBP16.63■□□□□ 0.25
PCNX1-202ENST00000439984 CABS1Q96KC9 395 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 E7EVH7 732 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 IDEP14735 1019 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 UBXN1Q04323 297 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 CCDC40Q4G0X9 1142 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 CHST3Q7LGC8 479 aa16.63■□□□□ 0.25
PCNX1-202ENST00000439984 CCT5P48643 541 aa16.62■□□□□ 0.25
PCNX1-202ENST00000439984 CCDC50Q8IVM0 306 aa16.62■□□□□ 0.25
PCNX1-202ENST00000439984 LMNTD2Q8IXW0 634 aa16.62■□□□□ 0.25
PCNX1-202ENST00000439984 DHX58Q96C10 678 aa16.62■□□□□ 0.25
PCNX1-202ENST00000439984 BRD1O95696 1058 aa16.62■□□□□ 0.25
PCNX1-202ENST00000439984 DENND4BO75064 1496 aaPredicted RBP16.62■□□□□ 0.25
PCNX1-202ENST00000439984 MINDY4BA8MYZ0 360 aa16.62■□□□□ 0.25
PCNX1-202ENST00000439984 CCT6AP40227 531 aaKnown RBP16.62■□□□□ 0.25
PCNX1-202ENST00000439984 ZNF530Q6P9A1 599 aaPredicted RBP16.62■□□□□ 0.25
PCNX1-202ENST00000439984 LRRC8AQ8IWT6 810 aa16.62■□□□□ 0.25
PCNX1-202ENST00000439984 MPHOSPH8Q99549 860 aa16.62■□□□□ 0.25
PCNX1-202ENST00000439984 FEZ2Q9UHY8 353 aaPredicted RBP16.62■□□□□ 0.25
PCNX1-202ENST00000439984 DAAM2Q86T65 1068 aa16.62■□□□□ 0.25
PCNX1-202ENST00000439984 ARHGAP45Q92619 1136 aa16.62■□□□□ 0.25
PCNX1-202ENST00000439984 PHAXQ9H814 394 aaKnown RBP16.62■□□□□ 0.25
PCNX1-202ENST00000439984 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
PCNX1-202ENST00000439984 ALG1Q9BT22 464 aa16.62■□□□□ 0.25
PCNX1-202ENST00000439984 WDR7Q9Y4E6 1490 aa16.61■□□□□ 0.25
PCNX1-202ENST00000439984 RUFY3Q7L099 469 aa16.61■□□□□ 0.25
PCNX1-202ENST00000439984 LOC102724159A0A0B4J2E5 919 aa16.61■□□□□ 0.25
PCNX1-202ENST00000439984 PWP2Q15269 919 aaKnown RBP16.61■□□□□ 0.25
PCNX1-202ENST00000439984 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
PCNX1-202ENST00000439984 SEC62Q99442 399 aaKnown RBP16.61■□□□□ 0.25
PCNX1-202ENST00000439984 RIPOR2Q9Y4F9 1068 aa16.61■□□□□ 0.25
PCNX1-202ENST00000439984 ARID5AQ03989 594 aa16.61■□□□□ 0.25
PCNX1-202ENST00000439984 ADGBQ8N7X0 1667 aa16.61■□□□□ 0.25
PCNX1-202ENST00000439984 CD2BP2O95400 341 aaKnown RBP16.61■□□□□ 0.25
PCNX1-202ENST00000439984 RNASE9P60153 205 aaKnown RBP16.61■□□□□ 0.25
PCNX1-202ENST00000439984 BCAS4Q8TDM0 211 aa16.61■□□□□ 0.25
PCNX1-202ENST00000439984 KCNK9Q9NPC2 374 aa16.61■□□□□ 0.25
PCNX1-202ENST00000439984 SND1Q7KZF4 910 aaKnown RBP eCLIP16.61■□□□□ 0.25
PCNX1-202ENST00000439984 C8orf58Q8NAV2 365 aa16.61■□□□□ 0.25
PCNX1-202ENST00000439984 FGFR1OPO95684 399 aaKnown RBP16.6■□□□□ 0.25
PCNX1-202ENST00000439984 JPH2Q9BR39 696 aaPredicted RBP16.6■□□□□ 0.25
PCNX1-202ENST00000439984 XPO4Q9C0E2 1151 aaKnown RBP16.6■□□□□ 0.25
PCNX1-202ENST00000439984 IMPACTQ9P2X3 320 aa16.6■□□□□ 0.25
PCNX1-202ENST00000439984 GNAT3A8MTJ3 354 aa16.6■□□□□ 0.25
PCNX1-202ENST00000439984 APOBRQ0VD83 1088 aa16.6■□□□□ 0.25
PCNX1-202ENST00000439984 MTX1Q13505 466 aa16.6■□□□□ 0.25
PCNX1-202ENST00000439984 IGSF22Q8N9C0 903 aa16.6■□□□□ 0.25
PCNX1-202ENST00000439984 CCDC42Q96M95 316 aa16.6■□□□□ 0.25
PCNX1-202ENST00000439984 GYS2P54840 703 aa16.6■□□□□ 0.25
PCNX1-202ENST00000439984 ZC3H6P61129 1189 aaKnown RBP16.6■□□□□ 0.25
PCNX1-202ENST00000439984 NMIQ13287 307 aaPredicted RBP16.6■□□□□ 0.25
PCNX1-202ENST00000439984 ESCO1Q5FWF5 840 aa16.6■□□□□ 0.25
PCNX1-202ENST00000439984 CREB3L3Q68CJ9 461 aa16.6■□□□□ 0.25
PCNX1-202ENST00000439984 PPANQ9NQ55 473 aaKnown RBP16.6■□□□□ 0.25
PCNX1-202ENST00000439984 MYO1CO00159 1063 aa16.6■□□□□ 0.25
PCNX1-202ENST00000439984 TSPYL6Q8N831 410 aa16.6■□□□□ 0.25
PCNX1-202ENST00000439984 IL16Q14005 1332 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 ICE2Q659A1 982 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 ACTN2P35609 894 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 NLRP5P59047 1200 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 TRIM68Q6AZZ1 485 aa16.59■□□□□ 0.25
PCNX1-202ENST00000439984 LEO1Q8WVC0 666 aaPredicted RBP16.59■□□□□ 0.25
PCNX1-202ENST00000439984 PTPDC1A2A3K4 754 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms