RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 USP17L3A6NCW0 530 aa20.38■□□□□ 0.85
ITGB1-207ENST00000439974 USP17L4A6NCW7 530 aa20.38■□□□□ 0.85
ITGB1-207ENST00000439974 ADM5C9JUS6 153 aa20.38■□□□□ 0.85
ITGB1-207ENST00000439974 ITGA6P23229 1130 aa20.38■□□□□ 0.85
ITGB1-207ENST00000439974 ZNF280AP59817 542 aaPredicted RBP20.38■□□□□ 0.85
ITGB1-207ENST00000439974 DLK2Q6UY11 383 aa20.38■□□□□ 0.85
ITGB1-207ENST00000439974 USP17L1Q7RTZ2 530 aa20.38■□□□□ 0.85
ITGB1-207ENST00000439974 SSH1Q8WYL5 1049 aa20.38■□□□□ 0.85
ITGB1-207ENST00000439974 GGA3Q9NZ52 723 aa20.38■□□□□ 0.85
ITGB1-207ENST00000439974 CSF1RP07333 972 aa20.37■□□□□ 0.85
ITGB1-207ENST00000439974 HUNKP57058 714 aa20.37■□□□□ 0.85
ITGB1-207ENST00000439974 FAM161AQ3B820 660 aa20.37■□□□□ 0.85
ITGB1-207ENST00000439974 SULF1Q8IWU6 871 aa20.37■□□□□ 0.85
ITGB1-207ENST00000439974 MRPL50Q8N5N7 158 aaKnown RBP20.37■□□□□ 0.85
ITGB1-207ENST00000439974 LEMD3Q9Y2U8 911 aa20.37■□□□□ 0.85
ITGB1-207ENST00000439974 WTIPA6NIX2 430 aaPredicted RBP20.36■□□□□ 0.85
ITGB1-207ENST00000439974 USP17L8P0C7I0 530 aa20.36■□□□□ 0.85
ITGB1-207ENST00000439974 GMLQ99445 158 aa20.36■□□□□ 0.85
ITGB1-207ENST00000439974 MPHOSPH8Q99549 860 aa20.36■□□□□ 0.85
ITGB1-207ENST00000439974 GBA2Q9HCG7 927 aaPredicted RBP20.36■□□□□ 0.85
ITGB1-207ENST00000439974 ASTN2O75129 1339 aaPredicted RBP20.35■□□□□ 0.85
ITGB1-207ENST00000439974 C2orf69Q8N8R5 385 aa20.35■□□□□ 0.85
ITGB1-207ENST00000439974 ANKRD2Q9GZV1 360 aa20.35■□□□□ 0.85
ITGB1-207ENST00000439974 COA1Q9GZY4 146 aa20.35■□□□□ 0.85
ITGB1-207ENST00000439974 BRPF1P55201 1214 aaPredicted RBP20.34■□□□□ 0.85
ITGB1-207ENST00000439974 NOGQ13253 232 aa20.34■□□□□ 0.85
ITGB1-207ENST00000439974 SCARF1Q14162 830 aa20.34■□□□□ 0.85
ITGB1-207ENST00000439974 MYOZ2Q9NPC6 264 aa20.34■□□□□ 0.85
ITGB1-207ENST00000439974 ZNF804BA4D1E1 1349 aa20.33■□□□□ 0.85
ITGB1-207ENST00000439974 ZBED9Q6R2W3 1325 aa20.33■□□□□ 0.85
ITGB1-207ENST00000439974 CA12O43570 354 aa20.33■□□□□ 0.85
ITGB1-207ENST00000439974 BEND3Q5T5X7 828 aa20.33■□□□□ 0.85
ITGB1-207ENST00000439974 ANGEL2Q5VTE6 544 aaKnown RBP20.33■□□□□ 0.85
ITGB1-207ENST00000439974 SMC4Q9NTJ3 1288 aa20.33■□□□□ 0.85
ITGB1-207ENST00000439974 MYO3BQ8WXR4 1341 aa20.32■□□□□ 0.84
ITGB1-207ENST00000439974 ANKRD18BA2A2Z9 1011 aa20.32■□□□□ 0.84
ITGB1-207ENST00000439974 DACT2Q5SW24 774 aa20.32■□□□□ 0.84
ITGB1-207ENST00000439974 STRIP1Q5VSL9 837 aa20.32■□□□□ 0.84
ITGB1-207ENST00000439974 RGMBQ6NW40 437 aa20.32■□□□□ 0.84
ITGB1-207ENST00000439974 TXNRD3Q86VQ6 643 aa20.32■□□□□ 0.84
ITGB1-207ENST00000439974 CDCA5Q96FF9 252 aa20.32■□□□□ 0.84
ITGB1-207ENST00000439974 PITPNM2Q9BZ72 1349 aa20.31■□□□□ 0.84
ITGB1-207ENST00000439974 CHRNDQ07001 517 aa20.31■□□□□ 0.84
ITGB1-207ENST00000439974 SLC4A10Q6U841 1118 aa20.31■□□□□ 0.84
ITGB1-207ENST00000439974 FBXW7Q969H0 707 aa20.31■□□□□ 0.84
ITGB1-207ENST00000439974 ZNF646O15015 1829 aaPredicted RBP20.31■□□□□ 0.84
ITGB1-207ENST00000439974 KCNJ4P48050 445 aa20.3■□□□□ 0.84
ITGB1-207ENST00000439974 FOXO4P98177 505 aa20.3■□□□□ 0.84
ITGB1-207ENST00000439974 IFIT5Q13325 482 aaKnown RBP20.3■□□□□ 0.84
ITGB1-207ENST00000439974 OGFOD1Q8N543 542 aa20.3■□□□□ 0.84
ITGB1-207ENST00000439974 MXD3Q9BW11 206 aa20.3■□□□□ 0.84
ITGB1-207ENST00000439974 TSKSQ9UJT2 592 aa20.3■□□□□ 0.84
ITGB1-207ENST00000439974 KLRK1P26718 216 aa20.29■□□□□ 0.84
ITGB1-207ENST00000439974 CCDC102AQ96A19 550 aa20.29■□□□□ 0.84
ITGB1-207ENST00000439974 CHMP3Q9Y3E7 222 aa20.29■□□□□ 0.84
ITGB1-207ENST00000439974 FAM155AB1AL88 458 aaPredicted RBP20.28■□□□□ 0.84
ITGB1-207ENST00000439974 GRM8O00222 908 aa20.28■□□□□ 0.84
ITGB1-207ENST00000439974 MMP14P50281 582 aa20.28■□□□□ 0.84
ITGB1-207ENST00000439974 ZNF157P51786 506 aaPredicted RBP20.28■□□□□ 0.84
ITGB1-207ENST00000439974 RARSP54136 660 aaKnown RBP20.28■□□□□ 0.84
ITGB1-207ENST00000439974 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
ITGB1-207ENST00000439974 ZIC5Q96T25 663 aa20.28■□□□□ 0.84
ITGB1-207ENST00000439974 TTLL5Q6EMB2 1281 aa20.27■□□□□ 0.84
ITGB1-207ENST00000439974 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
ITGB1-207ENST00000439974 ALDH1L1O75891 902 aa20.26■□□□□ 0.83
ITGB1-207ENST00000439974 FKBP1BP68106 108 aa20.26■□□□□ 0.83
ITGB1-207ENST00000439974 NBPF9Q3BBW0 867 aa20.26■□□□□ 0.83
ITGB1-207ENST00000439974 LMBR1LQ6UX01 489 aa20.26■□□□□ 0.83
ITGB1-207ENST00000439974 C9orf78Q9NZ63 289 aaPredicted RBP20.26■□□□□ 0.83
ITGB1-207ENST00000439974 NOB1Q9ULX3 412 aaKnown RBP20.26■□□□□ 0.83
ITGB1-207ENST00000439974 A0A1B0GUL6 1792 aa20.26■□□□□ 0.83
ITGB1-207ENST00000439974 PAPPA2Q9BXP8 1791 aa20.26■□□□□ 0.83
ITGB1-207ENST00000439974 WNT10BO00744 389 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 TAF5LO75529 589 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 BCAR3O75815 825 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 SLC10A3P09131 477 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 CT47B1P0C2W7 299 aaPredicted RBP20.25■□□□□ 0.83
ITGB1-207ENST00000439974 GTF2IP78347 998 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 CCDC57Q2TAC2 916 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 EPHA10Q5JZY3 1008 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 C15orf52Q6ZUT6 534 aaKnown RBP20.25■□□□□ 0.83
ITGB1-207ENST00000439974 ABHD8Q96I13 439 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 SRCIN1Q9C0H9 1055 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 CD209Q9NNX6 404 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 HDAC9Q9UKV0 1011 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 IRS2Q9Y4H2 1338 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 CASP8AP2Q9UKL3 1982 aa20.25■□□□□ 0.83
ITGB1-207ENST00000439974 KIF23Q02241 960 aaPredicted RBP20.24■□□□□ 0.83
ITGB1-207ENST00000439974 TAF7LQ5H9L4 462 aa20.24■□□□□ 0.83
ITGB1-207ENST00000439974 HELBQ8NG08 1087 aaPredicted RBP20.24■□□□□ 0.83
ITGB1-207ENST00000439974 SNAP23O00161 211 aa20.23■□□□□ 0.83
ITGB1-207ENST00000439974 KIAA0825Q8IV33 1275 aa20.23■□□□□ 0.83
ITGB1-207ENST00000439974 SCAF8Q9UPN6 1271 aaKnown RBP20.23■□□□□ 0.83
ITGB1-207ENST00000439974 PTPRCP08575 1304 aa20.23■□□□□ 0.83
ITGB1-207ENST00000439974 SASH1O94885 1247 aa20.22■□□□□ 0.83
ITGB1-207ENST00000439974 LDHAL6AQ6ZMR3 332 aa20.22■□□□□ 0.83
ITGB1-207ENST00000439974 ZNF804AQ7Z570 1209 aa20.22■□□□□ 0.83
ITGB1-207ENST00000439974 ZNF594Q96JF6 807 aaPredicted RBP20.22■□□□□ 0.83
ITGB1-207ENST00000439974 TNNQ9UQP3 1299 aa20.22■□□□□ 0.83
ITGB1-207ENST00000439974 RASAL3Q86YV0 1011 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms