RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 BLOC1S2Q6QNY1 142 aa18.01■□□□□ 0.47
CPSF7-205ENST00000439958 RPGRQ92834 1020 aaKnown RBP18.01■□□□□ 0.47
CPSF7-205ENST00000439958 BTAF1O14981 1849 aa18.01■□□□□ 0.47
CPSF7-205ENST00000439958 RIC1Q4ADV7 1423 aa18.01■□□□□ 0.47
CPSF7-205ENST00000439958 OSBP2Q969R2 916 aa18.01■□□□□ 0.47
CPSF7-205ENST00000439958 SSFA2P28290 1259 aa18■□□□□ 0.47
CPSF7-205ENST00000439958 TTLL5Q6EMB2 1281 aa18■□□□□ 0.47
CPSF7-205ENST00000439958 M0R2C6 588 aa18■□□□□ 0.47
CPSF7-205ENST00000439958 RASGRF1Q13972 1273 aa18■□□□□ 0.47
CPSF7-205ENST00000439958 COL9A3Q14050 684 aaPredicted RBP18■□□□□ 0.47
CPSF7-205ENST00000439958 CHST3Q7LGC8 479 aa18■□□□□ 0.47
CPSF7-205ENST00000439958 PPFIA3O75145 1194 aa17.99■□□□□ 0.47
CPSF7-205ENST00000439958 CYP2E1P05181 493 aaPredicted RBP17.99■□□□□ 0.47
CPSF7-205ENST00000439958 PKP1Q13835 747 aa17.99■□□□□ 0.47
CPSF7-205ENST00000439958 MAP4K1Q92918 833 aa17.99■□□□□ 0.47
CPSF7-205ENST00000439958 PIH1D3Q9NQM4 214 aaKnown RBP17.99■□□□□ 0.47
CPSF7-205ENST00000439958 RAI14Q9P0K7 980 aa17.99■□□□□ 0.47
CPSF7-205ENST00000439958 SPATA5Q8NB90 893 aa17.99■□□□□ 0.47
CPSF7-205ENST00000439958 GPR101Q96P66 508 aaPredicted RBP17.99■□□□□ 0.47
CPSF7-205ENST00000439958 A0A0G2JLW4 131 aa17.99■□□□□ 0.47
CPSF7-205ENST00000439958 VGLL2Q8N8G2 317 aa17.99■□□□□ 0.47
CPSF7-205ENST00000439958 NECAB1Q8N987 351 aa17.99■□□□□ 0.47
CPSF7-205ENST00000439958 PUS7LQ9H0K6 701 aaKnown RBP17.99■□□□□ 0.47
CPSF7-205ENST00000439958 HMG20BQ9P0W2 317 aa17.99■□□□□ 0.47
CPSF7-205ENST00000439958 MAST3O60307 1309 aa17.99■□□□□ 0.47
CPSF7-205ENST00000439958 CAVIN4Q5BKX8 364 aa17.98■□□□□ 0.47
CPSF7-205ENST00000439958 MAGEB6Q8N7X4 407 aa17.98■□□□□ 0.47
CPSF7-205ENST00000439958 MIGA1Q8NAN2 632 aa17.98■□□□□ 0.47
CPSF7-205ENST00000439958 TOMM22Q9NS69 142 aa17.98■□□□□ 0.47
CPSF7-205ENST00000439958 SERPINB2P05120 415 aa17.98■□□□□ 0.47
CPSF7-205ENST00000439958 CCDC83Q8IWF9 413 aa17.98■□□□□ 0.47
CPSF7-205ENST00000439958 WWC3Q9ULE0 1092 aa17.98■□□□□ 0.47
CPSF7-205ENST00000439958 MINPP1Q9UNW1 487 aa17.98■□□□□ 0.47
CPSF7-205ENST00000439958 UQCRFS1P1P0C7P4 283 aa17.97■□□□□ 0.47
CPSF7-205ENST00000439958 NECTIN1Q15223 517 aa17.97■□□□□ 0.47
CPSF7-205ENST00000439958 AIDAQ96BJ3 306 aa17.97■□□□□ 0.47
CPSF7-205ENST00000439958 ZNF219Q9P2Y4 722 aaPredicted RBP17.97■□□□□ 0.47
CPSF7-205ENST00000439958 NSFL1CQ9UNZ2 370 aaKnown RBP17.97■□□□□ 0.47
CPSF7-205ENST00000439958 GYS1P13807 737 aa17.97■□□□□ 0.47
CPSF7-205ENST00000439958 KLRK1P26718 216 aa17.97■□□□□ 0.47
CPSF7-205ENST00000439958 ST5P78524 1137 aa17.97■□□□□ 0.47
CPSF7-205ENST00000439958 PROM2Q8N271 834 aa17.97■□□□□ 0.47
CPSF7-205ENST00000439958 TNPO1Q92973 898 aaKnown RBP17.97■□□□□ 0.47
CPSF7-205ENST00000439958 PSMA5P28066 241 aa17.97■□□□□ 0.47
CPSF7-205ENST00000439958 ZNF532Q9HCE3 1301 aa17.96■□□□□ 0.47
CPSF7-205ENST00000439958 CHAMP1Q96JM3 812 aa17.96■□□□□ 0.47
CPSF7-205ENST00000439958 GPAA1O43292 621 aa17.96■□□□□ 0.47
CPSF7-205ENST00000439958 HSPD1P10809 573 aaKnown RBP17.96■□□□□ 0.47
CPSF7-205ENST00000439958 SLC27A3Q5K4L6 730 aa17.96■□□□□ 0.47
CPSF7-205ENST00000439958 ZMYM1Q5SVZ6 1142 aa17.96■□□□□ 0.47
CPSF7-205ENST00000439958 GNL3LQ9NVN8 582 aaKnown RBP17.96■□□□□ 0.47
CPSF7-205ENST00000439958 U3KPZ7 1027 aaPredicted RBP17.96■□□□□ 0.47
CPSF7-205ENST00000439958 CYP21A2P08686 494 aa17.95■□□□□ 0.46
CPSF7-205ENST00000439958 MCM2P49736 904 aa17.95■□□□□ 0.46
CPSF7-205ENST00000439958 MAP3K12Q12852 859 aa17.95■□□□□ 0.46
CPSF7-205ENST00000439958 NCLP19338 710 aaKnown RBP17.95■□□□□ 0.46
CPSF7-205ENST00000439958 ZNF827Q17R98 1081 aa17.95■□□□□ 0.46
CPSF7-205ENST00000439958 PRR5LQ6MZQ0 368 aa17.95■□□□□ 0.46
CPSF7-205ENST00000439958 POTEAQ6S8J7 498 aa17.95■□□□□ 0.46
CPSF7-205ENST00000439958 HELLSQ9NRZ9 838 aa17.95■□□□□ 0.46
CPSF7-205ENST00000439958 FOSBP53539 338 aa17.94■□□□□ 0.46
CPSF7-205ENST00000439958 EN1Q05925 392 aaPredicted RBP17.94■□□□□ 0.46
CPSF7-205ENST00000439958 TTF1Q15361 905 aaPredicted RBP17.94■□□□□ 0.46
CPSF7-205ENST00000439958 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
CPSF7-205ENST00000439958 FBXW7Q969H0 707 aa17.94■□□□□ 0.46
CPSF7-205ENST00000439958 BSDC1Q9NW68 430 aaPredicted RBP17.94■□□□□ 0.46
CPSF7-205ENST00000439958 LIMCH1Q9UPQ0 1083 aa17.94■□□□□ 0.46
CPSF7-205ENST00000439958 SRCAPQ6ZRS2 3230 aa17.94■□□□□ 0.46
CPSF7-205ENST00000439958 RUFY3Q7L099 469 aa17.94■□□□□ 0.46
CPSF7-205ENST00000439958 NEK1Q96PY6 1258 aa17.94■□□□□ 0.46
CPSF7-205ENST00000439958 CARMIL3Q8ND23 1372 aa17.94■□□□□ 0.46
CPSF7-205ENST00000439958 MED23Q9ULK4 1368 aa17.94■□□□□ 0.46
CPSF7-205ENST00000439958 APPBP2Q92624 585 aa17.94■□□□□ 0.46
CPSF7-205ENST00000439958 LARGE1O95461 756 aa17.93■□□□□ 0.46
CPSF7-205ENST00000439958 PDE6AP16499 860 aa17.93■□□□□ 0.46
CPSF7-205ENST00000439958 SLC4A8Q2Y0W8 1093 aa17.93■□□□□ 0.46
CPSF7-205ENST00000439958 ZSCAN25Q6NSZ9 544 aa17.93■□□□□ 0.46
CPSF7-205ENST00000439958 RAB11FIP4Q86YS3 637 aa17.93■□□□□ 0.46
CPSF7-205ENST00000439958 THSD7AQ9UPZ6 1657 aa17.93■□□□□ 0.46
CPSF7-205ENST00000439958 GBP4Q96PP9 640 aa17.93■□□□□ 0.46
CPSF7-205ENST00000439958 ZFYP08048 801 aaPredicted RBP17.93■□□□□ 0.46
CPSF7-205ENST00000439958 ARMT1Q9H993 441 aa17.93■□□□□ 0.46
CPSF7-205ENST00000439958 SMC3Q9UQE7 1217 aa17.93■□□□□ 0.46
CPSF7-205ENST00000439958 MBD4O95243 580 aa17.92■□□□□ 0.46
CPSF7-205ENST00000439958 FGFR2P21802 821 aa17.92■□□□□ 0.46
CPSF7-205ENST00000439958 RRP12Q5JTH9 1297 aaKnown RBP17.92■□□□□ 0.46
CPSF7-205ENST00000439958 C6orf229H3BNL8 230 aa17.92■□□□□ 0.46
CPSF7-205ENST00000439958 MCTP1Q6DN14 999 aa17.92■□□□□ 0.46
CPSF7-205ENST00000439958 MCM4P33991 863 aa17.91■□□□□ 0.46
CPSF7-205ENST00000439958 BRF1Q92994 677 aa17.91■□□□□ 0.46
CPSF7-205ENST00000439958 TAF1P21675 1872 aa17.91■□□□□ 0.46
CPSF7-205ENST00000439958 ADRA2BP18089 450 aa17.91■□□□□ 0.46
CPSF7-205ENST00000439958 CYP7A1P22680 504 aa17.91■□□□□ 0.46
CPSF7-205ENST00000439958 COL23A1Q86Y22 540 aaPredicted RBP17.91■□□□□ 0.46
CPSF7-205ENST00000439958 IMMTQ16891 758 aaKnown RBP17.9■□□□□ 0.46
CPSF7-205ENST00000439958 VPS37CA5D8V6 355 aaPredicted RBP17.9■□□□□ 0.46
CPSF7-205ENST00000439958 KDM4AO75164 1064 aa17.9■□□□□ 0.46
CPSF7-205ENST00000439958 FGAP02671 866 aa17.9■□□□□ 0.46
CPSF7-205ENST00000439958 MMP10P09238 476 aa17.9■□□□□ 0.46
CPSF7-205ENST00000439958 Q6ZUG5 572 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms