RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 KRT26Q7Z3Y9 468 aa12.74□□□□□ -0.37
CCDC66-207ENST00000439445 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
CCDC66-207ENST00000439445 EYA3Q99504 573 aa12.74□□□□□ -0.37
CCDC66-207ENST00000439445 ZC3H12CQ9C0D7 883 aaKnown RBP12.74□□□□□ -0.37
CCDC66-207ENST00000439445 MBIPQ9NS73 344 aa12.74□□□□□ -0.37
CCDC66-207ENST00000439445 LRRC37AA6NMS7 1700 aa12.74□□□□□ -0.37
CCDC66-207ENST00000439445 ELL2O00472 640 aaPredicted RBP12.73□□□□□ -0.37
CCDC66-207ENST00000439445 RPS12P25398 132 aaKnown RBP12.73□□□□□ -0.37
CCDC66-207ENST00000439445 BRPF1P55201 1214 aaPredicted RBP12.73□□□□□ -0.37
CCDC66-207ENST00000439445 TBC1D16Q8TBP0 767 aa12.73□□□□□ -0.37
CCDC66-207ENST00000439445 DCPSQ96C86 337 aaKnown RBP12.73□□□□□ -0.37
CCDC66-207ENST00000439445 PHAXQ9H814 394 aaKnown RBP12.73□□□□□ -0.37
CCDC66-207ENST00000439445 CASP8AP2Q9UKL3 1982 aa12.72□□□□□ -0.37
CCDC66-207ENST00000439445 EGFRP00533 1210 aa12.72□□□□□ -0.37
CCDC66-207ENST00000439445 HSP90B1P14625 803 aaKnown RBP12.72□□□□□ -0.37
CCDC66-207ENST00000439445 NOGQ13253 232 aa12.72□□□□□ -0.37
CCDC66-207ENST00000439445 C2orf69Q8N8R5 385 aa12.72□□□□□ -0.37
CCDC66-207ENST00000439445 ZBTB38Q8NAP3 1195 aaPredicted RBP12.72□□□□□ -0.37
CCDC66-207ENST00000439445 SEC31BQ9NQW1 1179 aa12.72□□□□□ -0.37
CCDC66-207ENST00000439445 ANKIB1Q9P2G1 1089 aa12.72□□□□□ -0.37
CCDC66-207ENST00000439445 GNAI1P63096 354 aa12.71□□□□□ -0.37
CCDC66-207ENST00000439445 FAM161AQ3B820 660 aa12.71□□□□□ -0.37
CCDC66-207ENST00000439445 JARID2Q92833 1246 aaPredicted RBP12.71□□□□□ -0.37
CCDC66-207ENST00000439445 ZIC5Q96T25 663 aa12.71□□□□□ -0.37
CCDC66-207ENST00000439445 MYD88Q99836 296 aa12.71□□□□□ -0.37
CCDC66-207ENST00000439445 COL4A1P02462 1669 aa12.7□□□□□ -0.38
CCDC66-207ENST00000439445 ADM5C9JUS6 153 aa12.7□□□□□ -0.38
CCDC66-207ENST00000439445 APAF1O14727 1248 aa12.7□□□□□ -0.38
CCDC66-207ENST00000439445 UFL1O94874 794 aa12.7□□□□□ -0.38
CCDC66-207ENST00000439445 VIL1P09327 827 aaKnown RBP12.7□□□□□ -0.38
CCDC66-207ENST00000439445 ZNF853P0CG23 659 aa12.7□□□□□ -0.38
CCDC66-207ENST00000439445 CALD1Q05682 793 aaKnown RBP12.7□□□□□ -0.38
CCDC66-207ENST00000439445 CCDC152Q4G0S7 254 aa12.7□□□□□ -0.38
CCDC66-207ENST00000439445 CCDC191Q8NCU4 936 aa12.7□□□□□ -0.38
CCDC66-207ENST00000439445 CCDC85AQ96PX6 553 aaPredicted RBP12.7□□□□□ -0.38
CCDC66-207ENST00000439445 GBA2Q9HCG7 927 aaPredicted RBP12.7□□□□□ -0.38
CCDC66-207ENST00000439445 IFT57Q9NWB7 429 aa12.7□□□□□ -0.38
CCDC66-207ENST00000439445 PODXL2Q9NZ53 605 aa12.7□□□□□ -0.38
CCDC66-207ENST00000439445 GGA1Q9UJY5 639 aa12.7□□□□□ -0.38
CCDC66-207ENST00000439445 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
CCDC66-207ENST00000439445 PDE8AO60658 829 aa12.69□□□□□ -0.38
CCDC66-207ENST00000439445 PCCAP05165 728 aaPredicted RBP12.69□□□□□ -0.38
CCDC66-207ENST00000439445 KIF4BQ2VIQ3 1234 aa12.69□□□□□ -0.38
CCDC66-207ENST00000439445 RGMBQ6NW40 437 aa12.69□□□□□ -0.38
CCDC66-207ENST00000439445 SULF1Q8IWU6 871 aa12.69□□□□□ -0.38
CCDC66-207ENST00000439445 EFCAB3Q8N7B9 438 aa12.69□□□□□ -0.38
CCDC66-207ENST00000439445 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
CCDC66-207ENST00000439445 MCOLN1Q9GZU1 580 aa12.69□□□□□ -0.38
CCDC66-207ENST00000439445 CWC25Q9NXE8 425 aaPredicted RBP12.69□□□□□ -0.38
CCDC66-207ENST00000439445 DDX58O95786 925 aaKnown RBP12.68□□□□□ -0.38
CCDC66-207ENST00000439445 ZNF157P51786 506 aaPredicted RBP12.68□□□□□ -0.38
CCDC66-207ENST00000439445 KIF23Q02241 960 aaPredicted RBP12.68□□□□□ -0.38
CCDC66-207ENST00000439445 MLLT1Q03111 559 aaPredicted RBP12.68□□□□□ -0.38
CCDC66-207ENST00000439445 DGKZQ13574 1117 aa12.68□□□□□ -0.38
CCDC66-207ENST00000439445 C8orf58Q8NAV2 365 aa12.68□□□□□ -0.38
CCDC66-207ENST00000439445 GGA3Q9NZ52 723 aa12.68□□□□□ -0.38
CCDC66-207ENST00000439445 SCN9AQ15858 1988 aa12.68□□□□□ -0.38
CCDC66-207ENST00000439445 TNRC18O15417 2968 aaPredicted RBP12.68□□□□□ -0.38
CCDC66-207ENST00000439445 ASTN2O75129 1339 aaPredicted RBP12.67□□□□□ -0.38
CCDC66-207ENST00000439445 FAM155AB1AL88 458 aaPredicted RBP12.67□□□□□ -0.38
CCDC66-207ENST00000439445 CCDC30Q5VVM6 783 aa12.67□□□□□ -0.38
CCDC66-207ENST00000439445 RSBN1LQ6PCB5 846 aaPredicted RBP12.67□□□□□ -0.38
CCDC66-207ENST00000439445 ANKRD18AQ8IVF6 992 aa12.67□□□□□ -0.38
CCDC66-207ENST00000439445 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
CCDC66-207ENST00000439445 METTL22Q9BUU2 404 aaPredicted RBP12.67□□□□□ -0.38
CCDC66-207ENST00000439445 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
CCDC66-207ENST00000439445 PRKRIP1Q9H875 184 aaPredicted RBP12.67□□□□□ -0.38
CCDC66-207ENST00000439445 XDHP47989 1333 aa12.66□□□□□ -0.38
CCDC66-207ENST00000439445 RGS19P49795 217 aa12.66□□□□□ -0.38
CCDC66-207ENST00000439445 SCARF1Q14162 830 aa12.66□□□□□ -0.38
CCDC66-207ENST00000439445 AGBL3Q8NEM8 1001 aa12.66□□□□□ -0.38
CCDC66-207ENST00000439445 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.66□□□□□ -0.38
CCDC66-207ENST00000439445 MAP3K2Q9Y2U5 619 aa12.66□□□□□ -0.38
CCDC66-207ENST00000439445 TRPA1O75762 1119 aa12.65□□□□□ -0.38
CCDC66-207ENST00000439445 USP17L8P0C7I0 530 aa12.65□□□□□ -0.38
CCDC66-207ENST00000439445 ZNF280AP59817 542 aaPredicted RBP12.65□□□□□ -0.38
CCDC66-207ENST00000439445 ANGEL2Q5VTE6 544 aaKnown RBP12.65□□□□□ -0.38
CCDC66-207ENST00000439445 CDCA5Q96FF9 252 aa12.65□□□□□ -0.38
CCDC66-207ENST00000439445 PI4KAP2A4QPH2 592 aa12.64□□□□□ -0.39
CCDC66-207ENST00000439445 USP17L3A6NCW0 530 aa12.64□□□□□ -0.39
CCDC66-207ENST00000439445 USP17L4A6NCW7 530 aa12.64□□□□□ -0.39
CCDC66-207ENST00000439445 ATP2B4P23634 1241 aa12.64□□□□□ -0.39
CCDC66-207ENST00000439445 CTSWP56202 376 aa12.64□□□□□ -0.39
CCDC66-207ENST00000439445 USP17L1Q7RTZ2 530 aa12.64□□□□□ -0.39
CCDC66-207ENST00000439445 PODNQ7Z5L7 613 aa12.64□□□□□ -0.39
CCDC66-207ENST00000439445 TSPYL6Q8N831 410 aa12.64□□□□□ -0.39
CCDC66-207ENST00000439445 PI4KAP1Q8N8J0 262 aa12.64□□□□□ -0.39
CCDC66-207ENST00000439445 CDC5LQ99459 802 aaKnown RBP12.64□□□□□ -0.39
CCDC66-207ENST00000439445 RNF186Q9NXI6 227 aa12.64□□□□□ -0.39
CCDC66-207ENST00000439445 AKAP11Q9UKA4 1901 aa12.63□□□□□ -0.39
CCDC66-207ENST00000439445 WTIPA6NIX2 430 aaPredicted RBP12.63□□□□□ -0.39
CCDC66-207ENST00000439445 IGKV5-2P06315 115 aa12.63□□□□□ -0.39
CCDC66-207ENST00000439445 NEXNQ0ZGT2 675 aa12.63□□□□□ -0.39
CCDC66-207ENST00000439445 KSR2Q6VAB6 950 aa12.63□□□□□ -0.39
CCDC66-207ENST00000439445 TTLL11Q8NHH1 800 aa12.63□□□□□ -0.39
CCDC66-207ENST00000439445 CSRNP1Q96S65 589 aa12.63□□□□□ -0.39
CCDC66-207ENST00000439445 GMLQ99445 158 aa12.63□□□□□ -0.39
CCDC66-207ENST00000439445 MYOZ2Q9NPC6 264 aa12.63□□□□□ -0.39
CCDC66-207ENST00000439445 SAGE1Q9NXZ1 904 aa12.63□□□□□ -0.39
CCDC66-207ENST00000439445 SLC10A3P09131 477 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms