RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 MEGF6O75095 1541 aa15.86■□□□□ 0.13
PCNX3-202ENST00000439247 TAF5LO75529 589 aa15.86■□□□□ 0.13
PCNX3-202ENST00000439247 CCT2P78371 535 aaKnown RBP15.86■□□□□ 0.13
PCNX3-202ENST00000439247 NCOA5Q9HCD5 579 aaKnown RBP15.86■□□□□ 0.13
PCNX3-202ENST00000439247 BTG4Q9NY30 223 aa15.86■□□□□ 0.13
PCNX3-202ENST00000439247 NAP1L2Q9ULW6 460 aaPredicted RBP15.86■□□□□ 0.13
PCNX3-202ENST00000439247 TOM1L2Q6ZVM7 507 aa15.85■□□□□ 0.13
PCNX3-202ENST00000439247 A0A0G2JLW4 131 aa15.85■□□□□ 0.13
PCNX3-202ENST00000439247 TAF3Q5VWG9 929 aa15.85■□□□□ 0.13
PCNX3-202ENST00000439247 ZNF530Q6P9A1 599 aaPredicted RBP15.85■□□□□ 0.13
PCNX3-202ENST00000439247 MPRIPQ6WCQ1 1025 aa15.85■□□□□ 0.13
PCNX3-202ENST00000439247 ZBTB9Q96C00 473 aa15.85■□□□□ 0.13
PCNX3-202ENST00000439247 BIN1O00499 593 aa15.85■□□□□ 0.13
PCNX3-202ENST00000439247 NEK1Q96PY6 1258 aa15.85■□□□□ 0.13
PCNX3-202ENST00000439247 CLCN6P51797 869 aa15.84■□□□□ 0.13
PCNX3-202ENST00000439247 G3BP1Q13283 466 aaKnown RBP eCLIP15.84■□□□□ 0.13
PCNX3-202ENST00000439247 MTX1Q13505 466 aa15.84■□□□□ 0.13
PCNX3-202ENST00000439247 ISM2Q6H9L7 571 aa15.84■□□□□ 0.13
PCNX3-202ENST00000439247 ARMCX5Q6P1M9 558 aa15.84■□□□□ 0.13
PCNX3-202ENST00000439247 FSIP1Q8NA03 581 aa15.84■□□□□ 0.13
PCNX3-202ENST00000439247 EPC1Q9H2F5 836 aa15.84■□□□□ 0.13
PCNX3-202ENST00000439247 WDR17Q8IZU2 1322 aa15.84■□□□□ 0.13
PCNX3-202ENST00000439247 MED23Q9ULK4 1368 aa15.84■□□□□ 0.13
PCNX3-202ENST00000439247 A0A1B0GVL5 298 aa15.84■□□□□ 0.13
PCNX3-202ENST00000439247 ME1P48163 572 aa15.84■□□□□ 0.13
PCNX3-202ENST00000439247 TMC6Q7Z403 805 aa15.84■□□□□ 0.13
PCNX3-202ENST00000439247 PPP1R13BQ96KQ4 1090 aa15.84■□□□□ 0.13
PCNX3-202ENST00000439247 SMC2O95347 1197 aa15.83■□□□□ 0.13
PCNX3-202ENST00000439247 CHST3Q7LGC8 479 aa15.83■□□□□ 0.13
PCNX3-202ENST00000439247 XPO4Q9C0E2 1151 aaKnown RBP15.83■□□□□ 0.13
PCNX3-202ENST00000439247 CFAP45Q9UL16 551 aa15.83■□□□□ 0.13
PCNX3-202ENST00000439247 FHOD1Q9Y613 1164 aa15.83■□□□□ 0.13
PCNX3-202ENST00000439247 KINO60870 393 aaKnown RBP15.83■□□□□ 0.12
PCNX3-202ENST00000439247 CTDNEP1O95476 244 aa15.83■□□□□ 0.12
PCNX3-202ENST00000439247 CYP21A2P08686 494 aa15.83■□□□□ 0.12
PCNX3-202ENST00000439247 APOBRQ0VD83 1088 aa15.83■□□□□ 0.12
PCNX3-202ENST00000439247 DPCR1Q3MIW9 517 aa15.83■□□□□ 0.12
PCNX3-202ENST00000439247 IFNKQ9P0W0 207 aa15.83■□□□□ 0.12
PCNX3-202ENST00000439247 GOLGA8FQ08AF8 430 aa15.83■□□□□ 0.12
PCNX3-202ENST00000439247 GOLGA8DPQ0D2H9 430 aa15.83■□□□□ 0.12
PCNX3-202ENST00000439247 CCDC73Q6ZRK6 1079 aa15.83■□□□□ 0.12
PCNX3-202ENST00000439247 STOX1Q6ZVD7 989 aa15.83■□□□□ 0.12
PCNX3-202ENST00000439247 RAPGEF4Q8WZA2 1011 aa15.83■□□□□ 0.12
PCNX3-202ENST00000439247 NOL10Q9BSC4 688 aaKnown RBP15.83■□□□□ 0.12
PCNX3-202ENST00000439247 BTBD11A6QL63 1104 aa15.82■□□□□ 0.12
PCNX3-202ENST00000439247 POLR3GO15318 223 aaPredicted RBP15.82■□□□□ 0.12
PCNX3-202ENST00000439247 EVA1CP58658 441 aa15.82■□□□□ 0.12
PCNX3-202ENST00000439247 ARHGAP29Q52LW3 1261 aa15.82■□□□□ 0.12
PCNX3-202ENST00000439247 OTUD7BQ6GQQ9 843 aa15.82■□□□□ 0.12
PCNX3-202ENST00000439247 ENGASEQ8NFI3 743 aa15.82■□□□□ 0.12
PCNX3-202ENST00000439247 NEMFO60524 1076 aa15.82■□□□□ 0.12
PCNX3-202ENST00000439247 CAPN2P17655 700 aa15.82■□□□□ 0.12
PCNX3-202ENST00000439247 PLEKHO1Q53GL0 409 aaPredicted RBP15.82■□□□□ 0.12
PCNX3-202ENST00000439247 ILDR1Q86SU0 546 aaPredicted RBP15.82■□□□□ 0.12
PCNX3-202ENST00000439247 TIGD1Q96MW7 591 aa15.82■□□□□ 0.12
PCNX3-202ENST00000439247 DNAJC2Q99543 621 aaKnown RBP15.82■□□□□ 0.12
PCNX3-202ENST00000439247 RCOR1Q9UKL0 485 aa15.82■□□□□ 0.12
PCNX3-202ENST00000439247 COL22A1Q8NFW1 1626 aaPredicted RBP15.82■□□□□ 0.12
PCNX3-202ENST00000439247 GIGYF1O75420 1035 aaPredicted RBP15.81■□□□□ 0.12
PCNX3-202ENST00000439247 SEC31AO94979 1220 aaKnown RBP15.81■□□□□ 0.12
PCNX3-202ENST00000439247 H2AFXP16104 143 aaPredicted RBP15.81■□□□□ 0.12
PCNX3-202ENST00000439247 ERC1Q8IUD2 1116 aa15.81■□□□□ 0.12
PCNX3-202ENST00000439247 ABCC6O95255 1503 aa15.81■□□□□ 0.12
PCNX3-202ENST00000439247 FANCGO15287 622 aa15.81■□□□□ 0.12
PCNX3-202ENST00000439247 PLA2G4AP47712 749 aa15.81■□□□□ 0.12
PCNX3-202ENST00000439247 NSUN7Q8NE18 718 aaKnown RBP15.81■□□□□ 0.12
PCNX3-202ENST00000439247 ANO10Q9NW15 660 aa15.81■□□□□ 0.12
PCNX3-202ENST00000439247 CCDC66A2RUB6 948 aa15.81■□□□□ 0.12
PCNX3-202ENST00000439247 HIP1O00291 1037 aa15.81■□□□□ 0.12
PCNX3-202ENST00000439247 TEFQ10587 303 aa15.81■□□□□ 0.12
PCNX3-202ENST00000439247 SDF4Q9BRK5 362 aa15.81■□□□□ 0.12
PCNX3-202ENST00000439247 PTPDC1A2A3K4 754 aa15.8■□□□□ 0.12
PCNX3-202ENST00000439247 EPHA10Q5JZY3 1008 aa15.8■□□□□ 0.12
PCNX3-202ENST00000439247 CEP57L1Q8IYX8 460 aa15.8■□□□□ 0.12
PCNX3-202ENST00000439247 TMX1Q9H3N1 280 aa15.8■□□□□ 0.12
PCNX3-202ENST00000439247 ZSCAN16Q9H4T2 348 aaPredicted RBP15.8■□□□□ 0.12
PCNX3-202ENST00000439247 PNMA6AP0CW24 399 aaPredicted RBP15.8■□□□□ 0.12
PCNX3-202ENST00000439247 HNRNPH2P55795 449 aaKnown RBP15.8■□□□□ 0.12
PCNX3-202ENST00000439247 FAM160A1Q05DH4 1040 aa15.8■□□□□ 0.12
PCNX3-202ENST00000439247 NEK11Q8NG66 645 aa15.8■□□□□ 0.12
PCNX3-202ENST00000439247 ZCCHC17Q9NP64 241 aaKnown RBP15.8■□□□□ 0.12
PCNX3-202ENST00000439247 SNRKQ9NRH2 765 aa15.8■□□□□ 0.12
PCNX3-202ENST00000439247 CAVIN2O95810 425 aa15.79■□□□□ 0.12
PCNX3-202ENST00000439247 TATP17735 454 aaPredicted RBP15.79■□□□□ 0.12
PCNX3-202ENST00000439247 CDK11BP21127 795 aaKnown RBP15.79■□□□□ 0.12
PCNX3-202ENST00000439247 NDUFA8P51970 172 aa15.79■□□□□ 0.12
PCNX3-202ENST00000439247 DDX46Q7L014 1031 aaKnown RBP15.79■□□□□ 0.12
PCNX3-202ENST00000439247 HOMER1Q86YM7 354 aa15.79■□□□□ 0.12
PCNX3-202ENST00000439247 FAM177A1Q8N128 213 aaPredicted RBP15.79■□□□□ 0.12
PCNX3-202ENST00000439247 ALDH8A1Q9H2A2 487 aaPredicted RBP15.79■□□□□ 0.12
PCNX3-202ENST00000439247 GJB4Q9NTQ9 266 aa15.79■□□□□ 0.12
PCNX3-202ENST00000439247 DNAI1Q9UI46 699 aa15.79■□□□□ 0.12
PCNX3-202ENST00000439247 PCDHA7Q9UN72 937 aa15.79■□□□□ 0.12
PCNX3-202ENST00000439247 GRM8O00222 908 aa15.79■□□□□ 0.12
PCNX3-202ENST00000439247 AKAP4Q5JQC9 854 aa15.79■□□□□ 0.12
PCNX3-202ENST00000439247 L2HGDHQ9H9P8 463 aa15.79■□□□□ 0.12
PCNX3-202ENST00000439247 AMOTQ4VCS5 1084 aa15.79■□□□□ 0.12
PCNX3-202ENST00000439247 CCDC93Q567U6 631 aa15.79■□□□□ 0.12
PCNX3-202ENST00000439247 KSR2Q6VAB6 950 aa15.79■□□□□ 0.12
PCNX3-202ENST00000439247 HMG20BQ9P0W2 317 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms