RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 NLRP3Q96P20 1036 aa17.1■□□□□ 0.33
TSC2-206ENST00000439117 NIP7Q9Y221 180 aaKnown RBP eCLIP17.1■□□□□ 0.33
TSC2-206ENST00000439117 DNA2P51530 1060 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 CCDC114Q96M63 670 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 MYO5CQ9NQX4 1742 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 CFAP74Q9C0B2 1584 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 CYLC1P35663 651 aaPredicted RBP17.09■□□□□ 0.33
TSC2-206ENST00000439117 ATP2B3Q16720 1220 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 GTF3C6Q969F1 213 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 DNAJC25Q9H1X3 360 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 HMG20BQ9P0W2 317 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 IFIT3O14879 490 aaKnown RBP17.09■□□□□ 0.33
TSC2-206ENST00000439117 F13A1P00488 732 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 SPAG1Q07617 926 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 DZIP3Q86Y13 1208 aaKnown RBP17.09■□□□□ 0.33
TSC2-206ENST00000439117 SLC12A7Q9Y666 1083 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 PDE1AP54750 535 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 SPTY2D1Q68D10 685 aaPredicted RBP17.09■□□□□ 0.33
TSC2-206ENST00000439117 CCDC155Q8N6L0 562 aa17.09■□□□□ 0.33
TSC2-206ENST00000439117 N4BP3O15049 544 aa17.08■□□□□ 0.33
TSC2-206ENST00000439117 U2AF2P26368 475 aaKnown RBP eCLIP17.08■□□□□ 0.33
TSC2-206ENST00000439117 SEC63Q9UGP8 760 aaKnown RBP17.08■□□□□ 0.33
TSC2-206ENST00000439117 MATR3P43243 847 aaKnown RBP eCLIP17.08■□□□□ 0.32
TSC2-206ENST00000439117 ZNF445P59923 1031 aa17.08■□□□□ 0.32
TSC2-206ENST00000439117 FAM114A1Q8IWE2 563 aa17.08■□□□□ 0.32
TSC2-206ENST00000439117 PTPRTO14522 1441 aa17.08■□□□□ 0.32
TSC2-206ENST00000439117 TMEM132AQ24JP5 1023 aa17.08■□□□□ 0.32
TSC2-206ENST00000439117 A6NNZ2 444 aa17.08■□□□□ 0.32
TSC2-206ENST00000439117 RIOK3O14730 519 aaKnown RBP17.08■□□□□ 0.32
TSC2-206ENST00000439117 BAG3O95817 575 aa17.08■□□□□ 0.32
TSC2-206ENST00000439117 POTEJP0CG39 1038 aa17.08■□□□□ 0.32
TSC2-206ENST00000439117 MTIF2P46199 727 aaKnown RBP17.08■□□□□ 0.32
TSC2-206ENST00000439117 TUBB8Q3ZCM7 444 aa17.08■□□□□ 0.32
TSC2-206ENST00000439117 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.08■□□□□ 0.32
TSC2-206ENST00000439117 INTS4Q96HW7 963 aaKnown RBP17.08■□□□□ 0.32
TSC2-206ENST00000439117 KAT6BQ8WYB5 2073 aa17.08■□□□□ 0.32
TSC2-206ENST00000439117 SYT10Q6XYQ8 523 aa17.07■□□□□ 0.32
TSC2-206ENST00000439117 B4GALNT4Q76KP1 1039 aa17.07■□□□□ 0.32
TSC2-206ENST00000439117 POTEDQ86YR6 584 aa17.07■□□□□ 0.32
TSC2-206ENST00000439117 BABAM1Q9NWV8 329 aa17.07■□□□□ 0.32
TSC2-206ENST00000439117 SDSP20132 328 aa17.07■□□□□ 0.32
TSC2-206ENST00000439117 FAM76AQ8TAV0 307 aa17.07■□□□□ 0.32
TSC2-206ENST00000439117 ZNF622Q969S3 477 aaKnown RBP eCLIP17.07■□□□□ 0.323e-6■□□□□ 11.2
TSC2-206ENST00000439117 DDX21Q9NR30 783 aaKnown RBP eCLIP17.07■□□□□ 0.32
TSC2-206ENST00000439117 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
TSC2-206ENST00000439117 FSD2A1L4K1 749 aa17.07■□□□□ 0.32
TSC2-206ENST00000439117 KIF5BP33176 963 aa17.07■□□□□ 0.32
TSC2-206ENST00000439117 ZNF76P36508 570 aa17.07■□□□□ 0.32
TSC2-206ENST00000439117 SARNPP82979 210 aaKnown RBP17.07■□□□□ 0.32
TSC2-206ENST00000439117 IFI16Q16666 785 aaKnown RBP17.07■□□□□ 0.32
TSC2-206ENST00000439117 KCNG4Q8TDN1 519 aa17.07■□□□□ 0.32
TSC2-206ENST00000439117 UTP14AQ9BVJ6 771 aaKnown RBP17.07■□□□□ 0.32
TSC2-206ENST00000439117 CDCA7Q9BWT1 371 aaPredicted RBP17.07■□□□□ 0.32
TSC2-206ENST00000439117 RBSNQ9H1K0 784 aa17.07■□□□□ 0.32
TSC2-206ENST00000439117 TMCO5BA8MYB1 307 aa17.07■□□□□ 0.32
TSC2-206ENST00000439117 MRPS27Q92552 414 aaKnown RBP17.07■□□□□ 0.32
TSC2-206ENST00000439117 ZFYP08048 801 aaPredicted RBP17.06■□□□□ 0.32
TSC2-206ENST00000439117 RLBP1P12271 317 aa17.06■□□□□ 0.32
TSC2-206ENST00000439117 HOOK3Q86VS8 718 aa17.06■□□□□ 0.32
TSC2-206ENST00000439117 AOPEPQ8N6M6 819 aa17.06■□□□□ 0.32
TSC2-206ENST00000439117 TNNQ9UQP3 1299 aa17.06■□□□□ 0.32
TSC2-206ENST00000439117 CEP83Q9Y592 693 aa17.06■□□□□ 0.32
TSC2-206ENST00000439117 GOLGA8BA8MQT2 603 aa17.06■□□□□ 0.32
TSC2-206ENST00000439117 AKR1B10O60218 316 aa17.06■□□□□ 0.32
TSC2-206ENST00000439117 CWF19L2Q2TBE0 894 aaKnown RBP17.06■□□□□ 0.32
TSC2-206ENST00000439117 ADGBQ8N7X0 1667 aa17.06■□□□□ 0.32
TSC2-206ENST00000439117 CFAP65Q6ZU64 1925 aaKnown RBP17.06■□□□□ 0.32
TSC2-206ENST00000439117 SYKP43405 635 aa17.06■□□□□ 0.32
TSC2-206ENST00000439117 NAA25Q14CX7 972 aa17.05■□□□□ 0.32
TSC2-206ENST00000439117 GOLGA8AA7E2F4 631 aa17.05■□□□□ 0.32
TSC2-206ENST00000439117 DNAJC21Q5F1R6 531 aaKnown RBP17.05■□□□□ 0.32
TSC2-206ENST00000439117 CCDC82Q8N4S0 544 aa17.05■□□□□ 0.32
TSC2-206ENST00000439117 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
TSC2-206ENST00000439117 PHACTR2O75167 634 aa17.05■□□□□ 0.32
TSC2-206ENST00000439117 SLAIN2Q9P270 581 aa17.05■□□□□ 0.32
TSC2-206ENST00000439117 DESP17661 470 aa17.05■□□□□ 0.32
TSC2-206ENST00000439117 EVCP57679 992 aa17.05■□□□□ 0.32
TSC2-206ENST00000439117 DDX12PQ92771 950 aa17.05■□□□□ 0.32
TSC2-206ENST00000439117 ZNF790Q6PG37 636 aa17.04■□□□□ 0.32
TSC2-206ENST00000439117 STMN4Q9H169 189 aaPredicted RBP17.04■□□□□ 0.32
TSC2-206ENST00000439117 RTCBQ9Y3I0 505 aaKnown RBP17.04■□□□□ 0.32
TSC2-206ENST00000439117 CATIPQ7Z7H3 387 aa17.04■□□□□ 0.32
TSC2-206ENST00000439117 NEK1Q96PY6 1258 aa17.04■□□□□ 0.32
TSC2-206ENST00000439117 ARHGEF10O15013 1369 aa17.04■□□□□ 0.32
TSC2-206ENST00000439117 CEP85Q6P2H3 762 aa17.04■□□□□ 0.32
TSC2-206ENST00000439117 SCLT1Q96NL6 688 aa17.04■□□□□ 0.32
TSC2-206ENST00000439117 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
TSC2-206ENST00000439117 TACC1O75410 805 aa17.04■□□□□ 0.32
TSC2-206ENST00000439117 HAND2P61296 217 aa17.04■□□□□ 0.32
TSC2-206ENST00000439117 TTC14Q96N46 770 aa17.04■□□□□ 0.32
TSC2-206ENST00000439117 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.04■□□□□ 0.32
TSC2-206ENST00000439117 NYXQ9GZU5 481 aa17.04■□□□□ 0.32
TSC2-206ENST00000439117 DCTPP1Q9H773 170 aa17.04■□□□□ 0.32
TSC2-206ENST00000439117 TPTE2Q6XPS3 522 aa17.03■□□□□ 0.32
TSC2-206ENST00000439117 RAB34Q9BZG1 259 aa17.03■□□□□ 0.32
TSC2-206ENST00000439117 ZBTB40Q9NUA8 1239 aa17.03■□□□□ 0.32
TSC2-206ENST00000439117 RBM28Q9NW13 759 aaKnown RBP17.03■□□□□ 0.32
TSC2-206ENST00000439117 ORC3Q9UBD5 711 aaPredicted RBP17.03■□□□□ 0.32
TSC2-206ENST00000439117 GCC2Q8IWJ2 1684 aa17.03■□□□□ 0.32
TSC2-206ENST00000439117 DNM1Q05193 864 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms