RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 TRPM4Q8TD43 1214 aa16.64■□□□□ 0.25
LINC00399-201ENST00000439008 PANK1Q8TE04 598 aa16.64■□□□□ 0.25
LINC00399-201ENST00000439008 GMLQ99445 158 aa16.64■□□□□ 0.25
LINC00399-201ENST00000439008 PA2G4Q9UQ80 394 aaKnown RBP16.64■□□□□ 0.25
LINC00399-201ENST00000439008 LDHDQ86WU2 507 aa16.63■□□□□ 0.25
LINC00399-201ENST00000439008 DZIP1LQ8IYY4 767 aaKnown RBP16.63■□□□□ 0.25
LINC00399-201ENST00000439008 CNOT7Q9UIV1 285 aaKnown RBP16.63■□□□□ 0.25
LINC00399-201ENST00000439008 ITGBL1O95965 494 aaPredicted RBP16.62■□□□□ 0.25
LINC00399-201ENST00000439008 GNAI3P08754 354 aa16.62■□□□□ 0.25
LINC00399-201ENST00000439008 LMOD1P29536 600 aaPredicted RBP16.62■□□□□ 0.25
LINC00399-201ENST00000439008 KCNJ4P48050 445 aa16.62■□□□□ 0.25
LINC00399-201ENST00000439008 FMR1Q06787 632 aaKnown RBP eCLIP16.62■□□□□ 0.25
LINC00399-201ENST00000439008 MAP1SQ66K74 1059 aaPredicted RBP16.62■□□□□ 0.25
LINC00399-201ENST00000439008 SAMD7Q7Z3H4 446 aa16.62■□□□□ 0.25
LINC00399-201ENST00000439008 PODNQ7Z5L7 613 aa16.62■□□□□ 0.25
LINC00399-201ENST00000439008 MICALL2Q8IY33 904 aa16.62■□□□□ 0.25
LINC00399-201ENST00000439008 DPF2Q92785 391 aa16.62■□□□□ 0.25
LINC00399-201ENST00000439008 COA1Q9GZY4 146 aa16.62■□□□□ 0.25
LINC00399-201ENST00000439008 CD209Q9NNX6 404 aa16.62■□□□□ 0.25
LINC00399-201ENST00000439008 RCAN3Q9UKA8 241 aa16.62■□□□□ 0.25
LINC00399-201ENST00000439008 POLR2AP24928 1970 aaKnown RBP16.62■□□□□ 0.25
LINC00399-201ENST00000439008 USP17L3A6NCW0 530 aa16.61■□□□□ 0.25
LINC00399-201ENST00000439008 USP17L4A6NCW7 530 aa16.61■□□□□ 0.25
LINC00399-201ENST00000439008 G3V3G9 751 aa16.61■□□□□ 0.25
LINC00399-201ENST00000439008 EYA2O00167 538 aa16.61■□□□□ 0.25
LINC00399-201ENST00000439008 DACT2Q5SW24 774 aa16.61■□□□□ 0.25
LINC00399-201ENST00000439008 DCAF8Q5TAQ9 597 aa16.61■□□□□ 0.25
LINC00399-201ENST00000439008 RSBN1LQ6PCB5 846 aaPredicted RBP16.61■□□□□ 0.25
LINC00399-201ENST00000439008 USP17L1Q7RTZ2 530 aa16.61■□□□□ 0.25
LINC00399-201ENST00000439008 YTHDC1Q96MU7 727 aaKnown RBP16.61■□□□□ 0.25
LINC00399-201ENST00000439008 SIL1Q9H173 461 aa16.61■□□□□ 0.25
LINC00399-201ENST00000439008 ADARB2Q9NS39 739 aaKnown RBP16.61■□□□□ 0.25
LINC00399-201ENST00000439008 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.61■□□□□ 0.25
LINC00399-201ENST00000439008 MROH5Q6ZUA9 1318 aa16.61■□□□□ 0.25
LINC00399-201ENST00000439008 PNMA6EA0A0J9YXQ4 647 aa16.6■□□□□ 0.25
LINC00399-201ENST00000439008 ZBTB7BO15156 539 aaPredicted RBP16.6■□□□□ 0.25
LINC00399-201ENST00000439008 GYG1P46976 350 aa16.6■□□□□ 0.25
LINC00399-201ENST00000439008 MTX1Q13505 466 aa16.6■□□□□ 0.25
LINC00399-201ENST00000439008 UBE4AQ14139 1066 aa16.6■□□□□ 0.25
LINC00399-201ENST00000439008 PNMA8AQ86V59 439 aaPredicted RBP16.6■□□□□ 0.25
LINC00399-201ENST00000439008 FAM84BQ96KN1 310 aaPredicted RBP16.6■□□□□ 0.25
LINC00399-201ENST00000439008 C1orf115Q9H7X2 142 aa16.6■□□□□ 0.25
LINC00399-201ENST00000439008 PASKQ96RG2 1323 aa16.6■□□□□ 0.25
LINC00399-201ENST00000439008 ZNF609O15014 1411 aa16.6■□□□□ 0.25
LINC00399-201ENST00000439008 PDE8BO95263 885 aa16.59■□□□□ 0.25
LINC00399-201ENST00000439008 FGFR2P21802 821 aa16.59■□□□□ 0.25
LINC00399-201ENST00000439008 TBC1D10BQ4KMP7 808 aaPredicted RBP16.59■□□□□ 0.25
LINC00399-201ENST00000439008 METTL24Q5JXM2 366 aa16.59■□□□□ 0.25
LINC00399-201ENST00000439008 USP50Q70EL3 339 aaPredicted RBP16.59■□□□□ 0.25
LINC00399-201ENST00000439008 CERS5Q8N5B7 392 aa16.59■□□□□ 0.25
LINC00399-201ENST00000439008 CLEC11AQ9Y240 323 aa16.59■□□□□ 0.25
LINC00399-201ENST00000439008 ASTN2O75129 1339 aaPredicted RBP16.59■□□□□ 0.25
LINC00399-201ENST00000439008 GNAI2P04899 355 aa16.58■□□□□ 0.24
LINC00399-201ENST00000439008 IL1R1P14778 569 aa16.58■□□□□ 0.24
LINC00399-201ENST00000439008 RPS12P25398 132 aaKnown RBP16.58■□□□□ 0.24
LINC00399-201ENST00000439008 GTF2IP78347 998 aa16.58■□□□□ 0.24
LINC00399-201ENST00000439008 C20orf194Q5TEA3 1177 aa16.58■□□□□ 0.24
LINC00399-201ENST00000439008 DLK2Q6UY11 383 aa16.58■□□□□ 0.24
LINC00399-201ENST00000439008 ITPRIPQ8IWB1 547 aa16.58■□□□□ 0.24
LINC00399-201ENST00000439008 FTSJ3Q8IY81 847 aaKnown RBP16.58■□□□□ 0.24
LINC00399-201ENST00000439008 CNTROBQ8N137 903 aa16.58■□□□□ 0.24
LINC00399-201ENST00000439008 COPRSQ9NQ92 184 aa16.58■□□□□ 0.24
LINC00399-201ENST00000439008 PGAP2Q9UHJ9 254 aa16.58■□□□□ 0.24
LINC00399-201ENST00000439008 JAG2Q9Y219 1238 aa16.58■□□□□ 0.24
LINC00399-201ENST00000439008 PCNTO95613 3336 aa16.57■□□□□ 0.24
LINC00399-201ENST00000439008 SRGAP3O43295 1099 aa16.57■□□□□ 0.24
LINC00399-201ENST00000439008 ZNF280AP59817 542 aaPredicted RBP16.57■□□□□ 0.24
LINC00399-201ENST00000439008 STRIP1Q5VSL9 837 aa16.57■□□□□ 0.24
LINC00399-201ENST00000439008 TTLL5Q6EMB2 1281 aa16.57■□□□□ 0.24
LINC00399-201ENST00000439008 FBXO33Q7Z6M2 555 aa16.57■□□□□ 0.24
LINC00399-201ENST00000439008 DNAJC5GQ8N7S2 189 aa16.57■□□□□ 0.24
LINC00399-201ENST00000439008 AGBL3Q8NEM8 1001 aa16.57■□□□□ 0.24
LINC00399-201ENST00000439008 H7C1D1 291 aa16.56■□□□□ 0.24
LINC00399-201ENST00000439008 TRAF5O00463 557 aa16.56■□□□□ 0.24
LINC00399-201ENST00000439008 CIAO1O76071 339 aa16.56■□□□□ 0.24
LINC00399-201ENST00000439008 APLP1P51693 650 aa16.56■□□□□ 0.24
LINC00399-201ENST00000439008 RBM26Q5T8P6 1007 aaKnown RBP16.56■□□□□ 0.24
LINC00399-201ENST00000439008 TDRD7Q8NHU6 1098 aaKnown RBP16.56■□□□□ 0.24
LINC00399-201ENST00000439008 FBXW7Q969H0 707 aa16.56■□□□□ 0.24
LINC00399-201ENST00000439008 HIBADHP31937 336 aaKnown RBP16.55■□□□□ 0.24
LINC00399-201ENST00000439008 BCAMP50895 628 aa16.55■□□□□ 0.24
LINC00399-201ENST00000439008 POLA2Q14181 598 aa16.55■□□□□ 0.24
LINC00399-201ENST00000439008 ZNF804AQ7Z570 1209 aa16.55■□□□□ 0.24
LINC00399-201ENST00000439008 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
LINC00399-201ENST00000439008 IQSEC3Q9UPP2 1182 aaPredicted RBP16.55■□□□□ 0.24
LINC00399-201ENST00000439008 COG6Q9Y2V7 657 aa16.55■□□□□ 0.24
LINC00399-201ENST00000439008 GRIK5Q16478 980 aa16.54■□□□□ 0.24
LINC00399-201ENST00000439008 FBXO3Q9UK99 471 aa16.54■□□□□ 0.24
LINC00399-201ENST00000439008 HDAC5Q9UQL6 1122 aa16.54■□□□□ 0.24
LINC00399-201ENST00000439008 PCDHAC2Q9Y5I4 1007 aa16.54■□□□□ 0.24
LINC00399-201ENST00000439008 USP17L8P0C7I0 530 aa16.53■□□□□ 0.24
LINC00399-201ENST00000439008 ATP8B2P98198 1209 aa16.53■□□□□ 0.24
LINC00399-201ENST00000439008 PUM3Q15397 648 aaKnown RBP16.53■□□□□ 0.24
LINC00399-201ENST00000439008 KIF4BQ2VIQ3 1234 aa16.53■□□□□ 0.24
LINC00399-201ENST00000439008 KIAA0825Q8IV33 1275 aa16.53■□□□□ 0.24
LINC00399-201ENST00000439008 TRPM7Q96QT4 1865 aa16.52■□□□□ 0.24
LINC00399-201ENST00000439008 AOX1Q06278 1338 aa16.52■□□□□ 0.24
LINC00399-201ENST00000439008 FAM205AQ6ZU69 1335 aa16.52■□□□□ 0.24
LINC00399-201ENST00000439008 SASH1O94885 1247 aa16.52■□□□□ 0.24
LINC00399-201ENST00000439008 ADORA1P30542 326 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms