RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 EDEM1Q92611 657 aa6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 PSMG3-AS1Q96PY0 264 aa6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 UBL7Q96S82 380 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 POP1Q99575 1024 aaKnown RBP6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 CARD10Q9BWT7 1032 aa6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 SH2B1Q9NRF2 756 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 KCNK4Q9NYG8 393 aa6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 SALL4Q9UJQ4 1053 aa6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 FAM177BA6PVY3 158 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 TM4SF5O14894 197 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 PDGFAP04085 211 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 CES1P23141 567 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 C1orf127Q8N9H9 656 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 TTC16Q8NEE8 873 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 ADAM19Q9H013 955 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 GGNBP2Q9H3C7 697 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 A6NHS1 94 aa6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 TMEM88BA6NKF7 163 aa6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 MZF1P28698 734 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 EIF1AXP47813 144 aaKnown RBP6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 C8orf34Q49A92 452 aa6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 GTF3C2Q8WUA4 911 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 CEP41Q9BYV8 373 aa6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 RAXQ9Y2V3 346 aa6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 H3BRJ5 948 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 NFKBIEO00221 500 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 MPSTP25325 297 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 SSFA2P28290 1259 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 CABP4P57796 275 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 DUOXA2Q1HG44 320 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 KIAA1211Q6ZU35 1233 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 CCDC82Q8N4S0 544 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 KLHDC7BQ96G42 594 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 SEC31BQ9NQW1 1179 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 GTF3C3Q9Y5Q9 886 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 DDX3YO15523 660 aaKnown RBP6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 DHX15O43143 795 aaKnown RBP6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 PPP1R15AO75807 674 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 ACPPP15309 386 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 PIP4K2BP78356 416 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 ALKBH2Q6NS38 261 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 ARMC10Q8N2F6 343 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 FOXD4L4Q8WXT5 416 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 WNT8BQ93098 351 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 PMEPA1Q969W9 287 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 DZANK1Q9NVP4 752 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 STOML1Q9UBI4 398 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 PDE2AO00408 941 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 GSC2O15499 205 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 ADAM11O75078 769 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 TRPA1O75762 1119 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 IGLV1-40P01703 118 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 MTMR3Q13615 1198 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 UVSSAQ2YD98 709 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 UBASH3BQ8TF42 649 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 CHRDQ9H2X0 955 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 OSGEPQ9NPF4 335 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 POLIQ9UNA4 740 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 AAMPQ13685 434 aa6.02□□□□□ -1.45
HMGB1P18-201ENST00000438801 UTP4Q969X6 686 aaKnown RBP6.02□□□□□ -1.45
HMGB1P18-201ENST00000438801 FAM46AQ96IP4 442 aaKnown RBP6.02□□□□□ -1.45
HMGB1P18-201ENST00000438801 HHIPQ96QV1 700 aa6.02□□□□□ -1.45
HMGB1P18-201ENST00000438801 PCMTD2Q9NV79 361 aa6.02□□□□□ -1.45
HMGB1P18-201ENST00000438801 NPR3P17342 541 aa6.01□□□□□ -1.45
HMGB1P18-201ENST00000438801 SSTR4P31391 388 aa6.01□□□□□ -1.45
HMGB1P18-201ENST00000438801 TMEM102Q8N9M5 508 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P18-201ENST00000438801 SLC7A3Q8WY07 619 aa6.01□□□□□ -1.45
HMGB1P18-201ENST00000438801 MYRFLQ96LU7 910 aa6.01□□□□□ -1.45
HMGB1P18-201ENST00000438801 SOX13Q9UN79 622 aa6.01□□□□□ -1.45
HMGB1P18-201ENST00000438801 EREGO14944 169 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 PHACTR2O75167 634 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 TNFRSF21O75509 655 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 FAM13AO94988 1023 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 CD97P48960 835 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 NLRP12P59046 1061 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 EHHADHQ08426 723 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 NXPE3Q969Y0 559 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 OSMRQ99650 979 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 ZKSCAN3Q9BRR0 538 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 RNF208Q9H0X6 261 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 C7orf69Q9H7B7 122 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 MTMR7Q9Y216 660 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 ERCC6L2Q5T890 1561 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 SART1O43290 800 aaKnown RBP5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 TGFB1P01137 390 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 EDN3P14138 238 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 USP5P45974 858 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 ARL4DP49703 201 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 C19orf57Q0VDD7 668 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 NFIAQ12857 509 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 ANKRD34AQ69YU3 496 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 PHLDB3Q6NSJ2 640 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 CLEC10AQ8IUN9 316 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 TRIM42Q8IWZ5 723 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 SNX29Q8TEQ0 813 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 BSNDQ8WZ55 320 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 C1orf115Q9H7X2 142 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 HMX2A2RU54 273 aa5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 CARNS1A5YM72 827 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms