RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 EDEM1Q92611 657 aa6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 PSMG3-AS1Q96PY0 264 aa6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 UBL7Q96S82 380 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 POP1Q99575 1024 aaKnown RBP6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 CARD10Q9BWT7 1032 aa6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 SH2B1Q9NRF2 756 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 KCNK4Q9NYG8 393 aa6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 SALL4Q9UJQ4 1053 aa6.08□□□□□ -1.44
HMGB1P18-201ENST00000438801 FAM177BA6PVY3 158 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 TM4SF5O14894 197 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 PDGFAP04085 211 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 CES1P23141 567 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 C1orf127Q8N9H9 656 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 TTC16Q8NEE8 873 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 ADAM19Q9H013 955 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 GGNBP2Q9H3C7 697 aa6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P18-201ENST00000438801 A6NHS1 94 aa6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 TMEM88BA6NKF7 163 aa6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 MZF1P28698 734 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 EIF1AXP47813 144 aaKnown RBP6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 C8orf34Q49A92 452 aa6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 GTF3C2Q8WUA4 911 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 CEP41Q9BYV8 373 aa6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 RAXQ9Y2V3 346 aa6.06□□□□□ -1.44
HMGB1P18-201ENST00000438801 H3BRJ5 948 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 NFKBIEO00221 500 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 MPSTP25325 297 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 SSFA2P28290 1259 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 CABP4P57796 275 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 DUOXA2Q1HG44 320 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 KIAA1211Q6ZU35 1233 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 CCDC82Q8N4S0 544 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 KLHDC7BQ96G42 594 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 SEC31BQ9NQW1 1179 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 GTF3C3Q9Y5Q9 886 aa6.05□□□□□ -1.44
HMGB1P18-201ENST00000438801 DDX3YO15523 660 aaKnown RBP6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 DHX15O43143 795 aaKnown RBP6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 PPP1R15AO75807 674 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 ACPPP15309 386 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 PIP4K2BP78356 416 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 ALKBH2Q6NS38 261 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 ARMC10Q8N2F6 343 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 FOXD4L4Q8WXT5 416 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 WNT8BQ93098 351 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 PMEPA1Q969W9 287 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 DZANK1Q9NVP4 752 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 STOML1Q9UBI4 398 aa6.04□□□□□ -1.44
HMGB1P18-201ENST00000438801 PDE2AO00408 941 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 GSC2O15499 205 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 ADAM11O75078 769 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 TRPA1O75762 1119 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 IGLV1-40P01703 118 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 MTMR3Q13615 1198 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 UVSSAQ2YD98 709 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 UBASH3BQ8TF42 649 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 CHRDQ9H2X0 955 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 OSGEPQ9NPF4 335 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 POLIQ9UNA4 740 aa6.03□□□□□ -1.44
HMGB1P18-201ENST00000438801 AAMPQ13685 434 aa6.02□□□□□ -1.45
HMGB1P18-201ENST00000438801 UTP4Q969X6 686 aaKnown RBP6.02□□□□□ -1.45
HMGB1P18-201ENST00000438801 FAM46AQ96IP4 442 aaKnown RBP6.02□□□□□ -1.45
HMGB1P18-201ENST00000438801 HHIPQ96QV1 700 aa6.02□□□□□ -1.45
HMGB1P18-201ENST00000438801 PCMTD2Q9NV79 361 aa6.02□□□□□ -1.45
HMGB1P18-201ENST00000438801 NPR3P17342 541 aa6.01□□□□□ -1.45
HMGB1P18-201ENST00000438801 SSTR4P31391 388 aa6.01□□□□□ -1.45
HMGB1P18-201ENST00000438801 TMEM102Q8N9M5 508 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P18-201ENST00000438801 SLC7A3Q8WY07 619 aa6.01□□□□□ -1.45
HMGB1P18-201ENST00000438801 MYRFLQ96LU7 910 aa6.01□□□□□ -1.45
HMGB1P18-201ENST00000438801 SOX13Q9UN79 622 aa6.01□□□□□ -1.45
HMGB1P18-201ENST00000438801 EREGO14944 169 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 PHACTR2O75167 634 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 TNFRSF21O75509 655 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 FAM13AO94988 1023 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 CD97P48960 835 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 NLRP12P59046 1061 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 EHHADHQ08426 723 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 NXPE3Q969Y0 559 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 OSMRQ99650 979 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 ZKSCAN3Q9BRR0 538 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 RNF208Q9H0X6 261 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 C7orf69Q9H7B7 122 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 MTMR7Q9Y216 660 aa6□□□□□ -1.45
HMGB1P18-201ENST00000438801 ERCC6L2Q5T890 1561 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 SART1O43290 800 aaKnown RBP5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 TGFB1P01137 390 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 EDN3P14138 238 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 USP5P45974 858 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 ARL4DP49703 201 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 C19orf57Q0VDD7 668 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 NFIAQ12857 509 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 ANKRD34AQ69YU3 496 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 PHLDB3Q6NSJ2 640 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 CLEC10AQ8IUN9 316 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 TRIM42Q8IWZ5 723 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 SNX29Q8TEQ0 813 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 BSNDQ8WZ55 320 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 C1orf115Q9H7X2 142 aa5.99□□□□□ -1.45
HMGB1P18-201ENST00000438801 HMX2A2RU54 273 aa5.98□□□□□ -1.45
HMGB1P18-201ENST00000438801 CARNS1A5YM72 827 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms