RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 MYLIPQ8WY64 445 aa12.46□□□□□ -0.41
RPE-209ENST00000438191 GMLQ99445 158 aa12.46□□□□□ -0.41
RPE-209ENST00000438191 C1QTNF1Q9BXJ1 281 aa12.46□□□□□ -0.41
RPE-209ENST00000438191 ZFYVE28Q9HCC9 887 aa12.46□□□□□ -0.41
RPE-209ENST00000438191 GPTP24298 496 aa12.45□□□□□ -0.42
RPE-209ENST00000438191 LACTBP83111 547 aaPredicted RBP12.45□□□□□ -0.42
RPE-209ENST00000438191 TAF1CQ15572 869 aaPredicted RBP12.45□□□□□ -0.42
RPE-209ENST00000438191 P2RX7Q99572 595 aaKnown RBP12.45□□□□□ -0.42
RPE-209ENST00000438191 ERVV-1B6SEH8 477 aa12.44□□□□□ -0.42
RPE-209ENST00000438191 USP17L8P0C7I0 530 aa12.44□□□□□ -0.42
RPE-209ENST00000438191 KIF22Q14807 665 aa12.44□□□□□ -0.42
RPE-209ENST00000438191 SLC10A5Q5PT55 438 aa12.44□□□□□ -0.42
RPE-209ENST00000438191 IL17REQ8NFR9 667 aa12.44□□□□□ -0.42
RPE-209ENST00000438191 PAWRQ96IZ0 340 aaKnown RBP12.44□□□□□ -0.42
RPE-209ENST00000438191 SIN3AQ96ST3 1273 aa12.44□□□□□ -0.42
RPE-209ENST00000438191 POLLQ9UGP5 575 aa12.44□□□□□ -0.42
RPE-209ENST00000438191 RIPOR2Q9Y4F9 1068 aa12.44□□□□□ -0.42
RPE-209ENST00000438191 CAPN2P17655 700 aa12.43□□□□□ -0.42
RPE-209ENST00000438191 IL13P35225 146 aa12.43□□□□□ -0.42
RPE-209ENST00000438191 UBXN2AP68543 259 aa12.43□□□□□ -0.42
RPE-209ENST00000438191 GRAPQ13588 217 aa12.43□□□□□ -0.42
RPE-209ENST00000438191 GRAPLQ8TC17 118 aaPredicted RBP12.43□□□□□ -0.42
RPE-209ENST00000438191 UNC93B1Q9H1C4 597 aa12.43□□□□□ -0.42
RPE-209ENST00000438191 SEMA6BQ9H3T3 888 aa12.43□□□□□ -0.42
RPE-209ENST00000438191 SRRDQ9UH36 339 aa12.43□□□□□ -0.42
RPE-209ENST00000438191 C6orf229H3BNL8 230 aa12.42□□□□□ -0.42
RPE-209ENST00000438191 TMC4Q7Z404 712 aa12.42□□□□□ -0.42
RPE-209ENST00000438191 ZNF34Q8IZ26 560 aa12.42□□□□□ -0.42
RPE-209ENST00000438191 TRIM47Q96LD4 638 aa12.42□□□□□ -0.42
RPE-209ENST00000438191 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
RPE-209ENST00000438191 MAP3K15Q6ZN16 1313 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 FAM205AQ6ZU69 1335 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 UNCXA6NJT0 531 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 WNT10BO00744 389 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 TFRCP02786 760 aaKnown RBP12.41□□□□□ -0.42
RPE-209ENST00000438191 FOSL2P15408 326 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 CTGFP29279 349 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 NECAB2Q7Z6G3 386 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 USP38Q8NB14 1042 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 RAET1EQ8TD07 263 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 EYA3Q99504 573 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 LRFN3Q9BTN0 628 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 NCOR1O75376 2440 aa12.41□□□□□ -0.42
RPE-209ENST00000438191 SNRPA1P09661 255 aaKnown RBP12.4□□□□□ -0.42
RPE-209ENST00000438191 DDX46Q7L014 1031 aaKnown RBP12.4□□□□□ -0.42
RPE-209ENST00000438191 PPP1R42Q7Z4L9 355 aa12.4□□□□□ -0.42
RPE-209ENST00000438191 ADAMTS19Q8TE59 1207 aa12.4□□□□□ -0.42
RPE-209ENST00000438191 DIS3LQ8TF46 1054 aaKnown RBP12.4□□□□□ -0.42
RPE-209ENST00000438191 BRI3BPQ8WY22 251 aa12.4□□□□□ -0.42
RPE-209ENST00000438191 BIN2Q9UBW5 565 aaPredicted RBP12.4□□□□□ -0.42
RPE-209ENST00000438191 MUC6Q6W4X9 2439 aa12.39□□□□□ -0.43
RPE-209ENST00000438191 TLR2O60603 784 aa12.39□□□□□ -0.43
RPE-209ENST00000438191 OSBPP22059 807 aa12.39□□□□□ -0.43
RPE-209ENST00000438191 MRE11P49959 708 aa12.39□□□□□ -0.43
RPE-209ENST00000438191 FAM43AQ8N2R8 423 aa12.39□□□□□ -0.43
RPE-209ENST00000438191 UHRF1Q96T88 793 aaPredicted RBP12.39□□□□□ -0.43
RPE-209ENST00000438191 BDP1A6H8Y1 2624 aa12.39□□□□□ -0.43
RPE-209ENST00000438191 BTBD11A6QL63 1104 aa12.38□□□□□ -0.43
RPE-209ENST00000438191 PPP1R12BO60237 982 aaPredicted RBP12.38□□□□□ -0.43
RPE-209ENST00000438191 HMOX1P09601 288 aa12.38□□□□□ -0.43
RPE-209ENST00000438191 GPSM2P81274 684 aa12.38□□□□□ -0.43
RPE-209ENST00000438191 APOBEC3FQ8IUX4 373 aaKnown RBP12.38□□□□□ -0.43
RPE-209ENST00000438191 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
RPE-209ENST00000438191 CDH23Q9H251 3354 aa12.38□□□□□ -0.43
RPE-209ENST00000438191 HOXD10P28358 340 aa12.37□□□□□ -0.43
RPE-209ENST00000438191 PSMC4P43686 418 aa12.37□□□□□ -0.43
RPE-209ENST00000438191 NEUROD1Q13562 356 aa12.37□□□□□ -0.43
RPE-209ENST00000438191 TTLL7Q6ZT98 887 aa12.37□□□□□ -0.43
RPE-209ENST00000438191 NGEFQ8N5V2 710 aa12.37□□□□□ -0.43
RPE-209ENST00000438191 TBC1D16Q8TBP0 767 aa12.37□□□□□ -0.43
RPE-209ENST00000438191 DEFB118Q96PH6 123 aa12.37□□□□□ -0.43
RPE-209ENST00000438191 ZC3H12CQ9C0D7 883 aaKnown RBP12.37□□□□□ -0.43
RPE-209ENST00000438191 TTYH1Q9H313 450 aaPredicted RBP12.37□□□□□ -0.43
RPE-209ENST00000438191 COL1A1P02452 1464 aaPredicted RBP12.37□□□□□ -0.43
RPE-209ENST00000438191 OTOFQ9HC10 1997 aa12.37□□□□□ -0.43
RPE-209ENST00000438191 MYPNQ86TC9 1320 aa12.37□□□□□ -0.43
RPE-209ENST00000438191 CCL15-CCL14A0A0B4J2E2 113 aa12.36□□□□□ -0.43
RPE-209ENST00000438191 SASH1O94885 1247 aa12.36□□□□□ -0.43
RPE-209ENST00000438191 CCL15Q16663 113 aa12.36□□□□□ -0.43
RPE-209ENST00000438191 PARP10Q53GL7 1025 aa12.36□□□□□ -0.43
RPE-209ENST00000438191 ATXN2LQ8WWM7 1075 aaKnown RBP12.36□□□□□ -0.43
RPE-209ENST00000438191 OPTNQ96CV9 577 aa12.36□□□□□ -0.43
RPE-209ENST00000438191 ASB2Q96Q27 587 aa12.36□□□□□ -0.43
RPE-209ENST00000438191 CEMIPQ8WUJ3 1361 aa12.35□□□□□ -0.43
RPE-209ENST00000438191 G3V3G9 751 aa12.35□□□□□ -0.43
RPE-209ENST00000438191 MDM2Q00987 491 aaPredicted RBP12.35□□□□□ -0.43
RPE-209ENST00000438191 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
RPE-209ENST00000438191 SLAIN1Q8ND83 568 aa12.35□□□□□ -0.43
RPE-209ENST00000438191 UTP14AQ9BVJ6 771 aaKnown RBP12.35□□□□□ -0.43
RPE-209ENST00000438191 ZBTB3Q9H5J0 574 aa12.35□□□□□ -0.43
RPE-209ENST00000438191 GNAT3A8MTJ3 354 aa12.34□□□□□ -0.43
RPE-209ENST00000438191 USP2O75604 605 aaPredicted RBP12.34□□□□□ -0.43
RPE-209ENST00000438191 HCLS1P14317 486 aaPredicted RBP12.34□□□□□ -0.43
RPE-209ENST00000438191 CDCA8Q53HL2 280 aa12.34□□□□□ -0.43
RPE-209ENST00000438191 GIGYF2Q6Y7W6 1299 aaKnown RBP12.34□□□□□ -0.43
RPE-209ENST00000438191 KIF6Q6ZMV9 814 aa12.34□□□□□ -0.43
RPE-209ENST00000438191 ANKRD13AQ8IZ07 590 aa12.34□□□□□ -0.43
RPE-209ENST00000438191 HELBQ8NG08 1087 aaPredicted RBP12.34□□□□□ -0.43
RPE-209ENST00000438191 PAK6Q9NQU5 681 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms