RNA–Protein interactions for RNA: ENST00000437863.2

PTPN20-210, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5

Gene PTPN20, Length 3,125 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-210ENST00000437863 SULT6B1Q6IMI4 303 aa8.53□□□□□ -1.04
PTPN20-210ENST00000437863 ATF7IPQ6VMQ6 1270 aa8.53□□□□□ -1.04
PTPN20-210ENST00000437863 LRRC8AQ8IWT6 810 aa8.53□□□□□ -1.04
PTPN20-210ENST00000437863 PSMD1Q99460 953 aa8.53□□□□□ -1.04
PTPN20-210ENST00000437863 SRCIN1Q9C0H9 1055 aa8.53□□□□□ -1.04
PTPN20-210ENST00000437863 RPS6KL1Q9Y6S9 549 aa8.53□□□□□ -1.04
PTPN20-210ENST00000437863 GCP02774 474 aa8.53□□□□□ -1.04
PTPN20-210ENST00000437863 GSPT1P15170 499 aaKnown RBP8.53□□□□□ -1.04
PTPN20-210ENST00000437863 SNW1Q13573 536 aaKnown RBP8.53□□□□□ -1.04
PTPN20-210ENST00000437863 KCNV1Q6PIU1 500 aa8.53□□□□□ -1.04
PTPN20-210ENST00000437863 GNL3LQ9NVN8 582 aaKnown RBP8.53□□□□□ -1.04
PTPN20-210ENST00000437863 SKAP2O75563 359 aaPredicted RBP8.52□□□□□ -1.05
PTPN20-210ENST00000437863 ELF1P32519 619 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 MCM6Q14566 821 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 CCAR2Q8N163 923 aaKnown RBP8.52□□□□□ -1.05
PTPN20-210ENST00000437863 CTCFLQ8NI51 663 aaPredicted RBP8.52□□□□□ -1.05
PTPN20-210ENST00000437863 NUCKS1Q9H1E3 243 aaKnown RBP8.52□□□□□ -1.05
PTPN20-210ENST00000437863 MBIPQ9NS73 344 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 ATP10DQ9P241 1426 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 AP1G2O75843 785 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 CCNHP51946 323 aaPredicted RBP8.52□□□□□ -1.05
PTPN20-210ENST00000437863 ANAPC15P60006 121 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 UBE2HP62256 183 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 ANO6Q4KMQ2 910 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 AP1ARQ63HQ0 302 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 CC2D1AQ6P1N0 951 aaPredicted RBP8.52□□□□□ -1.05
PTPN20-210ENST00000437863 LRRC31Q6UY01 552 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 KIRREL3Q8IZU9 778 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 TSR2Q969E8 191 aaKnown RBP8.52□□□□□ -1.05
PTPN20-210ENST00000437863 API5Q9BZZ5 524 aaKnown RBP8.52□□□□□ -1.05
PTPN20-210ENST00000437863 PSD3Q9NYI0 1048 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 CPSF2Q9P2I0 782 aaKnown RBP8.52□□□□□ -1.05
PTPN20-210ENST00000437863 USP16Q9Y5T5 823 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 TOGARAM1Q9Y4F4 1720 aa8.52□□□□□ -1.05
PTPN20-210ENST00000437863 A0A087WUV0 522 aaPredicted RBP8.51□□□□□ -1.05
PTPN20-210ENST00000437863 EME2A4GXA9 379 aaPredicted RBP8.51□□□□□ -1.05
PTPN20-210ENST00000437863 GNAT3A8MTJ3 354 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 CPP00450 1065 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 TBC1D8BQ0IIM8 1120 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 SCRN1Q12765 414 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 PSMD2Q13200 908 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 AKAP4Q5JQC9 854 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 CBX8Q9HC52 389 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 COL5A2P05997 1499 aaPredicted RBP8.51□□□□□ -1.05
PTPN20-210ENST00000437863 CCDC69A6NI79 296 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 IPO7O95373 1038 aaKnown RBP8.51□□□□□ -1.05
PTPN20-210ENST00000437863 JAKMIP3Q5VZ66 844 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 HOMER1Q86YM7 354 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 VEZTQ9HBM0 779 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 ZBTB40Q9NUA8 1239 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 TAOK2Q9UL54 1235 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 N4BP1O75113 896 aaKnown RBP8.51□□□□□ -1.05
PTPN20-210ENST00000437863 TYRO3Q06418 890 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 MTHFSDQ2M296 383 aaKnown RBP8.51□□□□□ -1.05
PTPN20-210ENST00000437863 NUTM2GQ5VZR2 741 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 INTS3Q68E01 1043 aaKnown RBP8.51□□□□□ -1.05
PTPN20-210ENST00000437863 SSH1Q8WYL5 1049 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 ORAI2Q96SN7 254 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 CARD6Q9BX69 1037 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 TRIM6Q9C030 488 aaPredicted RBP8.51□□□□□ -1.05
PTPN20-210ENST00000437863 L2HGDHQ9H9P8 463 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 PDE11AQ9HCR9 933 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 ARFGAP3Q9NP61 516 aa8.51□□□□□ -1.05
PTPN20-210ENST00000437863 BSDC1Q9NW68 430 aaPredicted RBP8.51□□□□□ -1.05
PTPN20-210ENST00000437863 NOB1Q9ULX3 412 aaKnown RBP8.51□□□□□ -1.05
PTPN20-210ENST00000437863 EVCP57679 992 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 SETQ01105 290 aaPredicted RBP8.5□□□□□ -1.05
PTPN20-210ENST00000437863 PLA2G4DQ86XP0 818 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 BICC1Q9H694 974 aaKnown RBP8.5□□□□□ -1.05
PTPN20-210ENST00000437863 ETAA1Q9NY74 926 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 ITGB4P16144 1822 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 URI1O94763 535 aaPredicted RBP8.5□□□□□ -1.05
PTPN20-210ENST00000437863 NF2P35240 595 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 USP8P40818 1118 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 IRX1P78414 480 aaPredicted RBP8.5□□□□□ -1.05
PTPN20-210ENST00000437863 SNX1Q13596 522 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 BRINP3Q76B58 766 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 NBPF3Q9H094 633 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 CD248Q9HCU0 757 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 DNAI1Q9UI46 699 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 AKAP2Q9Y2D5 859 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 FAN1Q9Y2M0 1017 aa8.5□□□□□ -1.05
PTPN20-210ENST00000437863 WDR33Q9C0J8 1336 aaKnown RBP8.5□□□□□ -1.05
PTPN20-210ENST00000437863 APBB1O00213 710 aa8.49□□□□□ -1.05
PTPN20-210ENST00000437863 HMOX1P09601 288 aa8.49□□□□□ -1.05
PTPN20-210ENST00000437863 PEX19P40855 299 aa8.49□□□□□ -1.05
PTPN20-210ENST00000437863 NEDD9Q14511 834 aa8.49□□□□□ -1.05
PTPN20-210ENST00000437863 TEX11Q8IYF3 940 aa8.49□□□□□ -1.05
PTPN20-210ENST00000437863 ELP1O95163 1332 aa8.49□□□□□ -1.05
PTPN20-210ENST00000437863 DISP2A7MBM2 1401 aa8.49□□□□□ -1.05
PTPN20-210ENST00000437863 FUT8Q9BYC5 575 aa8.49□□□□□ -1.05
PTPN20-210ENST00000437863 UPF3BQ9BZI7 483 aaKnown RBP8.49□□□□□ -1.05
PTPN20-210ENST00000437863 RABEP2Q9H5N1 569 aa8.49□□□□□ -1.05
PTPN20-210ENST00000437863 MKRN1Q9UHC7 482 aaKnown RBP8.49□□□□□ -1.05
PTPN20-210ENST00000437863 ARFGEF2Q9Y6D5 1785 aa8.49□□□□□ -1.05
PTPN20-210ENST00000437863 MYBL2P10244 700 aa8.49□□□□□ -1.05
PTPN20-210ENST00000437863 RDXP35241 583 aaKnown RBP8.49□□□□□ -1.05
PTPN20-210ENST00000437863 MCM2P49736 904 aa8.49□□□□□ -1.05
PTPN20-210ENST00000437863 TWISTNBQ3B726 338 aaPredicted RBP8.49□□□□□ -1.05
PTPN20-210ENST00000437863 CCDC93Q567U6 631 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms