RNA–Protein interactions for RNA: ENST00000436754.5

PDLIM2-211, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-211ENST00000436754 MMP14P50281 582 aa13.95□□□□□ -0.18
PDLIM2-211ENST00000436754 GCKRQ14397 625 aa13.95□□□□□ -0.18
PDLIM2-211ENST00000436754 DLK2Q6UY11 383 aa13.95□□□□□ -0.18
PDLIM2-211ENST00000436754 SULF1Q8IWU6 871 aa13.95□□□□□ -0.18
PDLIM2-211ENST00000436754 MINPP1Q9UNW1 487 aa13.95□□□□□ -0.18
PDLIM2-211ENST00000436754 SPEF2Q9C093 1822 aa13.94□□□□□ -0.18
PDLIM2-211ENST00000436754 USP17L3A6NCW0 530 aa13.94□□□□□ -0.18
PDLIM2-211ENST00000436754 USP17L4A6NCW7 530 aa13.94□□□□□ -0.18
PDLIM2-211ENST00000436754 ADM5C9JUS6 153 aa13.94□□□□□ -0.18
PDLIM2-211ENST00000436754 USP17L8P0C7I0 530 aa13.94□□□□□ -0.18
PDLIM2-211ENST00000436754 RGS19P49795 217 aa13.94□□□□□ -0.18
PDLIM2-211ENST00000436754 USP17L1Q7RTZ2 530 aa13.94□□□□□ -0.18
PDLIM2-211ENST00000436754 SAGE1Q9NXZ1 904 aa13.94□□□□□ -0.18
PDLIM2-211ENST00000436754 PITPNM2Q9BZ72 1349 aa13.93□□□□□ -0.18
PDLIM2-211ENST00000436754 FKBP1BP68106 108 aa13.93□□□□□ -0.18
PDLIM2-211ENST00000436754 SCARF1Q14162 830 aa13.93□□□□□ -0.18
PDLIM2-211ENST00000436754 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
PDLIM2-211ENST00000436754 REM2Q8IYK8 340 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-211ENST00000436754 ZIC5Q96T25 663 aa13.93□□□□□ -0.18
PDLIM2-211ENST00000436754 PLA2G12BQ9BX93 195 aa13.93□□□□□ -0.18
PDLIM2-211ENST00000436754 MYOZ2Q9NPC6 264 aa13.93□□□□□ -0.18
PDLIM2-211ENST00000436754 GGA3Q9NZ52 723 aa13.93□□□□□ -0.18
PDLIM2-211ENST00000436754 TSKSQ9UJT2 592 aa13.93□□□□□ -0.18
PDLIM2-211ENST00000436754 MED23Q9ULK4 1368 aa13.93□□□□□ -0.18
PDLIM2-211ENST00000436754 PSME4Q14997 1843 aa13.92□□□□□ -0.18
PDLIM2-211ENST00000436754 ZNF157P51786 506 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-211ENST00000436754 BEND3Q5T5X7 828 aa13.92□□□□□ -0.18
PDLIM2-211ENST00000436754 MRPL50Q8N5N7 158 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-211ENST00000436754 CDCA5Q96FF9 252 aa13.92□□□□□ -0.18
PDLIM2-211ENST00000436754 GREM2Q9H772 168 aa13.92□□□□□ -0.18
PDLIM2-211ENST00000436754 LEMD3Q9Y2U8 911 aa13.92□□□□□ -0.18
PDLIM2-211ENST00000436754 CSF1RP07333 972 aa13.91□□□□□ -0.18
PDLIM2-211ENST00000436754 CCT4P50991 539 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-211ENST00000436754 KIF23Q02241 960 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-211ENST00000436754 STRIP1Q5VSL9 837 aa13.91□□□□□ -0.18
PDLIM2-211ENST00000436754 ANGEL2Q5VTE6 544 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-211ENST00000436754 SSH1Q8WYL5 1049 aa13.91□□□□□ -0.18
PDLIM2-211ENST00000436754 COA1Q9GZY4 146 aa13.91□□□□□ -0.18
PDLIM2-211ENST00000436754 ASTN2O75129 1339 aaPredicted RBP13.9□□□□□ -0.18
PDLIM2-211ENST00000436754 WTIPA6NIX2 430 aaPredicted RBP13.9□□□□□ -0.18
PDLIM2-211ENST00000436754 CCDC85CA6NKD9 419 aa13.9□□□□□ -0.18
PDLIM2-211ENST00000436754 SLC10A3P09131 477 aa13.9□□□□□ -0.18
PDLIM2-211ENST00000436754 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-211ENST00000436754 CASP7P55210 303 aa13.9□□□□□ -0.18
PDLIM2-211ENST00000436754 DACT2Q5SW24 774 aa13.9□□□□□ -0.18
PDLIM2-211ENST00000436754 SRCIN1Q9C0H9 1055 aa13.9□□□□□ -0.18
PDLIM2-211ENST00000436754 MCOLN1Q9GZU1 580 aa13.9□□□□□ -0.18
PDLIM2-211ENST00000436754 ANKRD2Q9GZV1 360 aa13.9□□□□□ -0.18
PDLIM2-211ENST00000436754 SMC4Q9NTJ3 1288 aa13.9□□□□□ -0.18
PDLIM2-211ENST00000436754 MYO3BQ8WXR4 1341 aa13.9□□□□□ -0.19
PDLIM2-211ENST00000436754 GRM8O00222 908 aa13.89□□□□□ -0.19
PDLIM2-211ENST00000436754 HNRNPUQ00839 825 aaKnown RBP eCLIP13.89□□□□□ -0.19
PDLIM2-211ENST00000436754 FAM161AQ3B820 660 aa13.89□□□□□ -0.19
PDLIM2-211ENST00000436754 TRMT2AQ8IZ69 625 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-211ENST00000436754 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
PDLIM2-211ENST00000436754 CSRNP1Q96S65 589 aa13.89□□□□□ -0.19
PDLIM2-211ENST00000436754 RNF186Q9NXI6 227 aa13.89□□□□□ -0.19
PDLIM2-211ENST00000436754 C9orf78Q9NZ63 289 aaPredicted RBP13.89□□□□□ -0.19
PDLIM2-211ENST00000436754 PTPRCP08575 1304 aa13.89□□□□□ -0.19
PDLIM2-211ENST00000436754 ALDH1L1O75891 902 aa13.88□□□□□ -0.19
PDLIM2-211ENST00000436754 CT47B1P0C2W7 299 aaPredicted RBP13.88□□□□□ -0.19
PDLIM2-211ENST00000436754 ITGA6P23229 1130 aa13.88□□□□□ -0.19
PDLIM2-211ENST00000436754 ALDH1L2Q3SY69 923 aa13.88□□□□□ -0.19
PDLIM2-211ENST00000436754 CHMP3Q9Y3E7 222 aa13.88□□□□□ -0.19
PDLIM2-211ENST00000436754 ZNF804BA4D1E1 1349 aa13.88□□□□□ -0.19
PDLIM2-211ENST00000436754 CASP8AP2Q9UKL3 1982 aa13.87□□□□□ -0.19
PDLIM2-211ENST00000436754 DGKZQ13574 1117 aa13.87□□□□□ -0.19
PDLIM2-211ENST00000436754 TXNRD3Q86VQ6 643 aa13.87□□□□□ -0.19
PDLIM2-211ENST00000436754 WNT10BO00744 389 aa13.86□□□□□ -0.19
PDLIM2-211ENST00000436754 NBPF9Q3BBW0 867 aa13.86□□□□□ -0.19
PDLIM2-211ENST00000436754 TTLL5Q6EMB2 1281 aa13.86□□□□□ -0.19
PDLIM2-211ENST00000436754 C15orf52Q6ZUT6 534 aaKnown RBP13.86□□□□□ -0.19
PDLIM2-211ENST00000436754 RASAL3Q86YV0 1011 aa13.86□□□□□ -0.19
PDLIM2-211ENST00000436754 MPHOSPH8Q99549 860 aa13.86□□□□□ -0.19
PDLIM2-211ENST00000436754 ANKRD18BA2A2Z9 1011 aa13.85□□□□□ -0.19
PDLIM2-211ENST00000436754 TRPA1O75762 1119 aa13.85□□□□□ -0.19
PDLIM2-211ENST00000436754 FOXO4P98177 505 aa13.85□□□□□ -0.19
PDLIM2-211ENST00000436754 MLLT1Q03111 559 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-211ENST00000436754 IFIT5Q13325 482 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-211ENST00000436754 PAPPA2Q9BXP8 1791 aa13.85□□□□□ -0.19
PDLIM2-211ENST00000436754 CHRNDQ07001 517 aa13.84□□□□□ -0.19
PDLIM2-211ENST00000436754 EPHA10Q5JZY3 1008 aa13.84□□□□□ -0.19
PDLIM2-211ENST00000436754 LMBR1LQ6UX01 489 aa13.84□□□□□ -0.19
PDLIM2-211ENST00000436754 ZBED3Q96IU2 234 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-211ENST00000436754 MXD3Q9BW11 206 aa13.84□□□□□ -0.19
PDLIM2-211ENST00000436754 ZNF646O15015 1829 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-211ENST00000436754 IRS2Q9Y4H2 1338 aa13.84□□□□□ -0.19
PDLIM2-211ENST00000436754 AKAP11Q9UKA4 1901 aa13.84□□□□□ -0.19
PDLIM2-211ENST00000436754 NBPF7P0C2Y1 421 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-211ENST00000436754 NF2P35240 595 aa13.83□□□□□ -0.2
PDLIM2-211ENST00000436754 TM4SF4P48230 202 aa13.83□□□□□ -0.2
PDLIM2-211ENST00000436754 CCDC57Q2TAC2 916 aa13.83□□□□□ -0.2
PDLIM2-211ENST00000436754 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.2
PDLIM2-211ENST00000436754 MTMR14Q8NCE2 650 aa13.83□□□□□ -0.2
PDLIM2-211ENST00000436754 CD209Q9NNX6 404 aa13.83□□□□□ -0.2
PDLIM2-211ENST00000436754 HDAC9Q9UKV0 1011 aa13.83□□□□□ -0.2
PDLIM2-211ENST00000436754 NOB1Q9ULX3 412 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-211ENST00000436754 UBE2Q2LH0YL09 131 aa13.82□□□□□ -0.2
PDLIM2-211ENST00000436754 RARSP54136 660 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-211ENST00000436754 FKBP1AP62942 108 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms