RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 BICDL1Q6ZP65 573 aa8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 CENPQQ7L2Z9 268 aaPredicted RBP8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 PPP1R42Q7Z4L9 355 aa8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 SPIRE2Q8WWL2 714 aa8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 POM121Q96HA1 1249 aa8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 UTP14AQ9BVJ6 771 aaKnown RBP8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 BICC1Q9H694 974 aaKnown RBP8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 TRMT112Q9UI30 125 aaKnown RBP8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 HDAC5Q9UQL6 1122 aa8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 MYH14Q7Z406 1995 aaKnown RBP8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 CDHR2Q9BYE9 1310 aa8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 ARFGEF2Q9Y6D5 1785 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 FAM177BA6PVY3 158 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 PPP1R3GB7ZBB8 358 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 SPTLC1O15269 473 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 PDIA4P13667 645 aaKnown RBP8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 DNAJB2P25686 324 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 TM4SF1P30408 202 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 NFIXQ14938 502 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 SMC5Q8IY18 1101 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 FLAD1Q8NFF5 587 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 SSH3Q8TE77 659 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 DCTPP1Q9H773 170 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 STK32BQ9NY57 414 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 LIMD1Q9UGP4 676 aa8.76□□□□□ -1.01
LSM3P3-201ENST00000436601 IRS4O14654 1257 aaPredicted RBP8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 SRGAP3O43295 1099 aa8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 LMBR1LQ6UX01 489 aa8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 KHSRPQ92945 711 aaKnown RBP eCLIP8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 CCDC97Q96F63 343 aaPredicted RBP8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 SETDB2Q96T68 719 aa8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 PLA2G12BQ9BX93 195 aa8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 FAM198AQ9UFP1 575 aa8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 RGPD3A6NKT7 1758 aaPredicted RBP8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 RGPD4Q7Z3J3 1758 aa8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 N4BP2Q86UW6 1770 aaPredicted RBP8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 CACNA1FO60840 1977 aa8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 SH3TC1Q8TE82 1336 aa8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 TAF1LQ8IZX4 1826 aa8.75□□□□□ -1.01
LSM3P3-201ENST00000436601 HMMRO75330 724 aa8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 CSF1RP07333 972 aa8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 HCLS1P14317 486 aaPredicted RBP8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 PTPREP23469 700 aa8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 RFX5P48382 616 aaPredicted RBP8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 DDR1Q08345 913 aa8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 ERFEQ4G0M1 354 aa8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 SLC10A5Q5PT55 438 aa8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 ILDR2Q71H61 639 aa8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 SKAP1Q86WV1 359 aa8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 NUTM1Q86Y26 1132 aa8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 ZNF710Q8N1W2 664 aa8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 GCC1Q96CN9 775 aa8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 SNRKQ9NRH2 765 aa8.74□□□□□ -1.01
LSM3P3-201ENST00000436601 KAT6BQ8WYB5 2073 aa8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 PDE8AO60658 829 aa8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 COL9A1P20849 921 aa8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 CTSWP56202 376 aa8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 RSBN1LQ6PCB5 846 aaPredicted RBP8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 TPTE2Q6XPS3 522 aa8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 NBPF5PQ86XG9 351 aaPredicted RBP8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 NLGN1Q8N2Q7 840 aa8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 TTLL11Q8NHH1 800 aa8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 PDGFDQ9GZP0 370 aaPredicted RBP8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 PRM3Q9NNZ6 103 aa8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 LHX6Q9UPM6 363 aa8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 PDZRN3Q9UPQ7 1066 aa8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 NOP58Q9Y2X3 529 aaKnown RBP8.73□□□□□ -1.01
LSM3P3-201ENST00000436601 SCN7AQ01118 1682 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 BCORQ6W2J9 1755 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 POLRMTO00411 1230 aaKnown RBP8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 SURF6O75683 361 aaKnown RBP8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 SERPINB2P05120 415 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 NUCB1Q02818 461 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 PTPN12Q05209 780 aaKnown RBP8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 NUDT18Q6ZVK8 323 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 CCDC24Q8N4L8 307 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 KLHDC4Q8TBB5 520 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 NYXQ9GZU5 481 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 TMEM134Q9H6X4 195 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 PLSCR2Q9NRY7 297 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 TSKSQ9UJT2 592 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 PA2G4Q9UQ80 394 aaKnown RBP8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 EXOC6BQ9Y2D4 811 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 CARMIL3Q8ND23 1372 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 ABCC12Q96J65 1359 aa8.72□□□□□ -1.01
LSM3P3-201ENST00000436601 UBR3Q6ZT12 1888 aa8.71□□□□□ -1.01
LSM3P3-201ENST00000436601 EP400Q96L91 3159 aa8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 DDX11L8A8MPP1 907 aa8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 TRIM6-TRIM34B2RNG4 842 aa8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 GTF2E1P29083 439 aaPredicted RBP8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 SF3B3Q15393 1217 aaKnown RBP8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 ANKRD45Q5TZF3 282 aa8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 MSL1Q68DK7 614 aa8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 PRR5LQ6MZQ0 368 aa8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 PACS2Q86VP3 889 aa8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 CHD1LQ86WJ1 897 aa8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 CCDC85AQ96PX6 553 aaPredicted RBP8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 GREM2Q9H772 168 aa8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 COPRSQ9NQ92 184 aa8.71□□□□□ -1.02
LSM3P3-201ENST00000436601 C4AP0C0L4 1744 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms