RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 STRIP1Q5VSL9 837 aa19.52■□□□□ 0.72
NELFE-204ENST00000436289 ANKRD18AQ8IVF6 992 aa19.52■□□□□ 0.72
NELFE-204ENST00000436289 TMEM106CQ9BVX2 250 aa19.52■□□□□ 0.72
NELFE-204ENST00000436289 SEC31BQ9NQW1 1179 aa19.52■□□□□ 0.72
NELFE-204ENST00000436289 ARHGEF6Q15052 776 aa19.51■□□□□ 0.71
NELFE-204ENST00000436289 PDE8AO60658 829 aa19.5■□□□□ 0.71
NELFE-204ENST00000436289 MAP3K11Q16584 847 aa19.5■□□□□ 0.71
NELFE-204ENST00000436289 DACT2Q5SW24 774 aa19.5■□□□□ 0.71
NELFE-204ENST00000436289 ZNF428Q96B54 188 aa19.5■□□□□ 0.71
NELFE-204ENST00000436289 ANGEL1Q9UNK9 670 aaKnown RBP19.5■□□□□ 0.71
NELFE-204ENST00000436289 SCAF8Q9UPN6 1271 aaKnown RBP19.5■□□□□ 0.71
NELFE-204ENST00000436289 PSME4Q14997 1843 aa19.49■□□□□ 0.71
NELFE-204ENST00000436289 PPP1R12BO60237 982 aaPredicted RBP19.49■□□□□ 0.71
NELFE-204ENST00000436289 NBPF11Q86T75 865 aa19.49■□□□□ 0.71
NELFE-204ENST00000436289 COA1Q9GZY4 146 aa19.49■□□□□ 0.71
NELFE-204ENST00000436289 EFCC1Q9HA90 598 aa19.49■□□□□ 0.71
NELFE-204ENST00000436289 MED23Q9ULK4 1368 aa19.48■□□□□ 0.71
NELFE-204ENST00000436289 EN2P19622 333 aaPredicted RBP19.48■□□□□ 0.71
NELFE-204ENST00000436289 TMPOP42166 694 aaKnown RBP19.48■□□□□ 0.71
NELFE-204ENST00000436289 RIC3Q7Z5B4 369 aa19.48■□□□□ 0.71
NELFE-204ENST00000436289 CCDC191Q8NCU4 936 aa19.48■□□□□ 0.71
NELFE-204ENST00000436289 CDC5LQ99459 802 aaKnown RBP19.48■□□□□ 0.71
NELFE-204ENST00000436289 PCCAP05165 728 aaPredicted RBP19.47■□□□□ 0.71
NELFE-204ENST00000436289 COLQQ9Y215 455 aaPredicted RBP19.47■□□□□ 0.71
NELFE-204ENST00000436289 PPP2R3BQ9Y5P8 575 aa19.47■□□□□ 0.71
NELFE-204ENST00000436289 SP3Q02447 781 aa19.46■□□□□ 0.71
NELFE-204ENST00000436289 GOLGA2Q08379 1002 aa19.46■□□□□ 0.71
NELFE-204ENST00000436289 PRKG1Q13976 671 aa19.46■□□□□ 0.71
NELFE-204ENST00000436289 BSDC1Q9NW68 430 aaPredicted RBP19.46■□□□□ 0.71
NELFE-204ENST00000436289 COL1A1P02452 1464 aaPredicted RBP19.46■□□□□ 0.71
NELFE-204ENST00000436289 RBBP6Q7Z6E9 1792 aaKnown RBP19.45■□□□□ 0.7
NELFE-204ENST00000436289 SUPT20HL1Q3ZLR7 823 aa19.45■□□□□ 0.7
NELFE-204ENST00000436289 DEFB129Q9H1M3 183 aa19.45■□□□□ 0.7
NELFE-204ENST00000436289 HTTP42858 3142 aa19.45■□□□□ 0.7
NELFE-204ENST00000436289 TTLL5Q6EMB2 1281 aa19.44■□□□□ 0.7
NELFE-204ENST00000436289 WNK4Q96J92 1243 aa19.44■□□□□ 0.7
NELFE-204ENST00000436289 LEMD3Q9Y2U8 911 aa19.44■□□□□ 0.7
NELFE-204ENST00000436289 CEP290O15078 2479 aa19.44■□□□□ 0.7
NELFE-204ENST00000436289 COL4A1P02462 1669 aa19.43■□□□□ 0.7
NELFE-204ENST00000436289 IGF2BP3O00425 579 aaKnown RBP eCLIP19.43■□□□□ 0.7
NELFE-204ENST00000436289 SASH1O94885 1247 aa19.43■□□□□ 0.7
NELFE-204ENST00000436289 KRT24Q2M2I5 525 aa19.43■□□□□ 0.7
NELFE-204ENST00000436289 CD99L2Q8TCZ2 262 aa19.43■□□□□ 0.7
NELFE-204ENST00000436289 FBXW7Q969H0 707 aa19.43■□□□□ 0.7
NELFE-204ENST00000436289 ZBED3Q96IU2 234 aaPredicted RBP19.43■□□□□ 0.7
NELFE-204ENST00000436289 CHMP4AQ9BY43 222 aa19.43■□□□□ 0.7
NELFE-204ENST00000436289 CWC25Q9NXE8 425 aaPredicted RBP19.43■□□□□ 0.7
NELFE-204ENST00000436289 MINPP1Q9UNW1 487 aa19.43■□□□□ 0.7
NELFE-204ENST00000436289 CCT4P50991 539 aaKnown RBP19.42■□□□□ 0.7
NELFE-204ENST00000436289 CRHR2Q13324 411 aa19.42■□□□□ 0.7
NELFE-204ENST00000436289 ZNF333Q96JL9 665 aa19.42■□□□□ 0.7
NELFE-204ENST00000436289 LAS1LQ9Y4W2 734 aaKnown RBP19.42■□□□□ 0.7
NELFE-204ENST00000436289 TESPA1A2RU30 521 aaPredicted RBP19.41■□□□□ 0.7
NELFE-204ENST00000436289 IREB2P48200 963 aaKnown RBP19.41■□□□□ 0.7
NELFE-204ENST00000436289 MTMR14Q8NCE2 650 aa19.41■□□□□ 0.7
NELFE-204ENST00000436289 MXD3Q9BW11 206 aa19.41■□□□□ 0.7
NELFE-204ENST00000436289 CENPFP49454 3210 aa19.41■□□□□ 0.7
NELFE-204ENST00000436289 TRIOBPQ9H2D6 2365 aa19.41■□□□□ 0.7
NELFE-204ENST00000436289 MYO1BO43795 1136 aa19.4■□□□□ 0.7
NELFE-204ENST00000436289 DLGAP5Q15398 846 aa19.4■□□□□ 0.7
NELFE-204ENST00000436289 SLC9C1Q4G0N8 1177 aa19.4■□□□□ 0.7
NELFE-204ENST00000436289 DUSP27Q5VZP5 1158 aa19.4■□□□□ 0.7
NELFE-204ENST00000436289 MYD88Q99836 296 aa19.4■□□□□ 0.7
NELFE-204ENST00000436289 DDX58O95786 925 aaKnown RBP19.39■□□□□ 0.69
NELFE-204ENST00000436289 SLC4A8Q2Y0W8 1093 aa19.39■□□□□ 0.69
NELFE-204ENST00000436289 KIAA0825Q8IV33 1275 aa19.39■□□□□ 0.69
NELFE-204ENST00000436289 ANKRD13AQ8IZ07 590 aa19.39■□□□□ 0.69
NELFE-204ENST00000436289 OTUD5Q96G74 571 aa19.39■□□□□ 0.69
NELFE-204ENST00000436289 CCDC85AQ96PX6 553 aaPredicted RBP19.39■□□□□ 0.69
NELFE-204ENST00000436289 ANKRD2Q9GZV1 360 aa19.38■□□□□ 0.69
NELFE-204ENST00000436289 WDHD1O75717 1129 aaPredicted RBP19.37■□□□□ 0.69
NELFE-204ENST00000436289 CTSWP56202 376 aa19.37■□□□□ 0.69
NELFE-204ENST00000436289 TTLL11Q8NHH1 800 aa19.37■□□□□ 0.69
NELFE-204ENST00000436289 CLMNQ96JQ2 1002 aa19.37■□□□□ 0.69
NELFE-204ENST00000436289 METTL22Q9BUU2 404 aaPredicted RBP19.37■□□□□ 0.69
NELFE-204ENST00000436289 ZNF804BA4D1E1 1349 aa19.36■□□□□ 0.69
NELFE-204ENST00000436289 H0YGN5 161 aa19.36■□□□□ 0.69
NELFE-204ENST00000436289 IGHMBP2P38935 993 aaKnown RBP19.36■□□□□ 0.69
NELFE-204ENST00000436289 NEUROD2Q15784 382 aa19.36■□□□□ 0.69
NELFE-204ENST00000436289 ZFYVE28Q9HCC9 887 aa19.36■□□□□ 0.69
NELFE-204ENST00000436289 GNRH1P01148 92 aa19.35■□□□□ 0.69
NELFE-204ENST00000436289 GTF2IP78347 998 aa19.35■□□□□ 0.69
NELFE-204ENST00000436289 PTPN18Q99952 460 aa19.35■□□□□ 0.69
NELFE-204ENST00000436289 BRCA2P51587 3418 aa19.34■□□□□ 0.69
NELFE-204ENST00000436289 WTIPA6NIX2 430 aaPredicted RBP19.34■□□□□ 0.69
NELFE-204ENST00000436289 DLL1O00548 723 aa19.34■□□□□ 0.69
NELFE-204ENST00000436289 USP2O75604 605 aaPredicted RBP19.34■□□□□ 0.69
NELFE-204ENST00000436289 PHAXQ9H814 394 aaKnown RBP19.34■□□□□ 0.69
NELFE-204ENST00000436289 TRIM35Q9UPQ4 493 aa19.34■□□□□ 0.69
NELFE-204ENST00000436289 PRMT2P55345 433 aa19.33■□□□□ 0.68
NELFE-204ENST00000436289 TXNRD3Q86VQ6 643 aa19.33■□□□□ 0.68
NELFE-204ENST00000436289 SLC17A8Q8NDX2 589 aa19.33■□□□□ 0.68
NELFE-204ENST00000436289 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.33■□□□□ 0.68
NELFE-204ENST00000436289 FZD1Q9UP38 647 aa19.33■□□□□ 0.68
NELFE-204ENST00000436289 LAMB1P07942 1786 aa19.33■□□□□ 0.68
NELFE-204ENST00000436289 GTF2A2P52657 109 aa19.32■□□□□ 0.68
NELFE-204ENST00000436289 FKBP1AP62942 108 aaKnown RBP19.32■□□□□ 0.68
NELFE-204ENST00000436289 TNFAIP1Q13829 316 aa19.32■□□□□ 0.68
NELFE-204ENST00000436289 KIF22Q14807 665 aa19.32■□□□□ 0.68
NELFE-204ENST00000436289 JARID2Q92833 1246 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 218.8 ms