RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 CNOT7Q9UIV1 285 aaKnown RBP9.98□□□□□ -0.81
VPS50-203ENST00000436177 TLL2Q9Y6L7 1015 aa9.98□□□□□ -0.81
VPS50-203ENST00000436177 PSMD14O00487 310 aa9.97□□□□□ -0.81
VPS50-203ENST00000436177 ECE2O60344 883 aa9.97□□□□□ -0.81
VPS50-203ENST00000436177 UFL1O94874 794 aa9.97□□□□□ -0.81
VPS50-203ENST00000436177 GPSM2P81274 684 aa9.97□□□□□ -0.81
VPS50-203ENST00000436177 FMR1Q06787 632 aaKnown RBP eCLIP9.97□□□□□ -0.814e-6■■■■□ 21.6
VPS50-203ENST00000436177 CYP4F22Q6NT55 531 aa9.97□□□□□ -0.81
VPS50-203ENST00000436177 CCDC191Q8NCU4 936 aa9.97□□□□□ -0.81
VPS50-203ENST00000436177 TRPM4Q8TD43 1214 aa9.97□□□□□ -0.81
VPS50-203ENST00000436177 DPF2Q92785 391 aa9.97□□□□□ -0.81
VPS50-203ENST00000436177 KRTAP3-3Q9BYR6 98 aa9.97□□□□□ -0.81
VPS50-203ENST00000436177 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
VPS50-203ENST00000436177 GGA1Q9UJY5 639 aa9.97□□□□□ -0.81
VPS50-203ENST00000436177 LTBP1Q14766 1721 aa9.96□□□□□ -0.81
VPS50-203ENST00000436177 CA12O43570 354 aa9.96□□□□□ -0.82
VPS50-203ENST00000436177 PCCAP05165 728 aaPredicted RBP9.96□□□□□ -0.82
VPS50-203ENST00000436177 ZNF853P0CG23 659 aa9.96□□□□□ -0.82
VPS50-203ENST00000436177 HSPA8P11142 646 aaKnown RBP9.96□□□□□ -0.82
VPS50-203ENST00000436177 DOK7Q18PE1 504 aa9.96□□□□□ -0.82
VPS50-203ENST00000436177 TBC1D10BQ4KMP7 808 aaPredicted RBP9.96□□□□□ -0.82
VPS50-203ENST00000436177 KRT26Q7Z3Y9 468 aa9.96□□□□□ -0.82
VPS50-203ENST00000436177 ANKRD18AQ8IVF6 992 aa9.96□□□□□ -0.82
VPS50-203ENST00000436177 DCPSQ96C86 337 aaKnown RBP9.96□□□□□ -0.82
VPS50-203ENST00000436177 CDC5LQ99459 802 aaKnown RBP9.96□□□□□ -0.82
VPS50-203ENST00000436177 PHAXQ9H814 394 aaKnown RBP9.96□□□□□ -0.82
VPS50-203ENST00000436177 YDJCA8MPS7 323 aa9.95□□□□□ -0.82
VPS50-203ENST00000436177 PDE8AO60658 829 aa9.95□□□□□ -0.82
VPS50-203ENST00000436177 MAP2K2P36507 400 aa9.95□□□□□ -0.82
VPS50-203ENST00000436177 RBM26Q5T8P6 1007 aaKnown RBP9.95□□□□□ -0.82
VPS50-203ENST00000436177 CST9Q5W186 159 aa9.95□□□□□ -0.82
VPS50-203ENST00000436177 SAPCD2Q86UD0 394 aa9.95□□□□□ -0.82
VPS50-203ENST00000436177 SULF1Q8IWU6 871 aa9.95□□□□□ -0.82
VPS50-203ENST00000436177 C8orf58Q8NAV2 365 aa9.95□□□□□ -0.82
VPS50-203ENST00000436177 TBC1D16Q8TBP0 767 aa9.95□□□□□ -0.82
VPS50-203ENST00000436177 CCDC85AQ96PX6 553 aaPredicted RBP9.95□□□□□ -0.82
VPS50-203ENST00000436177 METTL22Q9BUU2 404 aaPredicted RBP9.95□□□□□ -0.82
VPS50-203ENST00000436177 POLLQ9UGP5 575 aa9.95□□□□□ -0.82
VPS50-203ENST00000436177 MAP3K2Q9Y2U5 619 aa9.95□□□□□ -0.82
VPS50-203ENST00000436177 DUOX1Q9NRD9 1551 aa9.94□□□□□ -0.82
VPS50-203ENST00000436177 XDHP47989 1333 aa9.94□□□□□ -0.82
VPS50-203ENST00000436177 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
VPS50-203ENST00000436177 CTSWP56202 376 aa9.94□□□□□ -0.82
VPS50-203ENST00000436177 HUNKP57058 714 aa9.94□□□□□ -0.82
VPS50-203ENST00000436177 NOGQ13253 232 aa9.94□□□□□ -0.82
VPS50-203ENST00000436177 KIF4BQ2VIQ3 1234 aa9.94□□□□□ -0.82
VPS50-203ENST00000436177 SAMD7Q7Z3H4 446 aa9.94□□□□□ -0.82
VPS50-203ENST00000436177 USP48Q86UV5 1035 aa9.94□□□□□ -0.82
VPS50-203ENST00000436177 C2orf69Q8N8R5 385 aa9.94□□□□□ -0.82
VPS50-203ENST00000436177 RNF25Q96BH1 459 aaPredicted RBP9.94□□□□□ -0.82
VPS50-203ENST00000436177 HHIPL1Q96JK4 782 aa9.94□□□□□ -0.82
VPS50-203ENST00000436177 SEC31BQ9NQW1 1179 aa9.94□□□□□ -0.82
VPS50-203ENST00000436177 PGAP2Q9UHJ9 254 aa9.94□□□□□ -0.82
VPS50-203ENST00000436177 LRRC37AA6NMS7 1700 aa9.93□□□□□ -0.82
VPS50-203ENST00000436177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.93□□□□□ -0.82
VPS50-203ENST00000436177 SHTN1A0MZ66 631 aa9.93□□□□□ -0.82
VPS50-203ENST00000436177 AOC2O75106 756 aa9.93□□□□□ -0.82
VPS50-203ENST00000436177 HIRAP54198 1017 aaPredicted RBP9.93□□□□□ -0.82
VPS50-203ENST00000436177 KSR2Q6VAB6 950 aa9.93□□□□□ -0.82
VPS50-203ENST00000436177 TSR2Q969E8 191 aaKnown RBP9.93□□□□□ -0.82
VPS50-203ENST00000436177 ZFP91Q96JP5 570 aaPredicted RBP9.93□□□□□ -0.82
VPS50-203ENST00000436177 GGA3Q9NZ52 723 aa9.93□□□□□ -0.82
VPS50-203ENST00000436177 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
VPS50-203ENST00000436177 LAMB2P55268 1798 aa9.93□□□□□ -0.82
VPS50-203ENST00000436177 PI4KAP2A4QPH2 592 aa9.92□□□□□ -0.82
VPS50-203ENST00000436177 ATP2B4P23634 1241 aa9.92□□□□□ -0.82
VPS50-203ENST00000436177 BRPF1P55201 1214 aaPredicted RBP9.92□□□□□ -0.82
VPS50-203ENST00000436177 TWISTNBQ3B726 338 aaPredicted RBP9.92□□□□□ -0.82
VPS50-203ENST00000436177 PI4KAP1Q8N8J0 262 aa9.92□□□□□ -0.82
VPS50-203ENST00000436177 JARID2Q92833 1246 aaPredicted RBP9.92□□□□□ -0.82
VPS50-203ENST00000436177 FBXW7Q969H0 707 aa9.92□□□□□ -0.82
VPS50-203ENST00000436177 GBA2Q9HCG7 927 aaPredicted RBP9.92□□□□□ -0.82
VPS50-203ENST00000436177 RTL9Q8NET4 1388 aa9.91□□□□□ -0.82
VPS50-203ENST00000436177 DDX60Q8IY21 1712 aaKnown RBP9.91□□□□□ -0.82
VPS50-203ENST00000436177 ADM5C9JUS6 153 aa9.91□□□□□ -0.82
VPS50-203ENST00000436177 IGHMBP2P38935 993 aaKnown RBP9.91□□□□□ -0.82
VPS50-203ENST00000436177 RSBN1LQ6PCB5 846 aaPredicted RBP9.91□□□□□ -0.82
VPS50-203ENST00000436177 UBE3BQ7Z3V4 1068 aa9.91□□□□□ -0.82
VPS50-203ENST00000436177 OGFOD1Q8N543 542 aa9.91□□□□□ -0.82
VPS50-203ENST00000436177 AGBL3Q8NEM8 1001 aa9.91□□□□□ -0.82
VPS50-203ENST00000436177 ABHD8Q96I13 439 aa9.91□□□□□ -0.82
VPS50-203ENST00000436177 MYH16Q9H6N6 1097 aa9.91□□□□□ -0.82
VPS50-203ENST00000436177 MRS2Q9HD23 443 aa9.91□□□□□ -0.82
VPS50-203ENST00000436177 TSKSQ9UJT2 592 aa9.91□□□□□ -0.82
VPS50-203ENST00000436177 THSD7BQ9C0I4 1608 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 IL16Q14005 1332 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 USP17L3A6NCW0 530 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 USP17L4A6NCW7 530 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 VIL1P09327 827 aaKnown RBP9.9□□□□□ -0.82
VPS50-203ENST00000436177 USP17L8P0C7I0 530 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 HOXB1P14653 301 aaPredicted RBP9.9□□□□□ -0.82
VPS50-203ENST00000436177 KCNJ4P48050 445 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 ZNF157P51786 506 aaPredicted RBP9.9□□□□□ -0.82
VPS50-203ENST00000436177 FKBP5Q13451 457 aaPredicted RBP9.9□□□□□ -0.82
VPS50-203ENST00000436177 CCDC27Q2M243 656 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 USP17L1Q7RTZ2 530 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 PODNQ7Z5L7 613 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
VPS50-203ENST00000436177 TSPYL6Q8N831 410 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms