RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 CDCA7Q9BWT1 371 aaPredicted RBP14.34□□□□□ -0.11
CLDN4-203ENST00000435050 HELLSQ9NRZ9 838 aa14.34□□□□□ -0.11
CLDN4-203ENST00000435050 DDIT3P35638 169 aa14.33□□□□□ -0.12
CLDN4-203ENST00000435050 IL6STP40189 918 aaPredicted RBP14.33□□□□□ -0.12
CLDN4-203ENST00000435050 DHX32Q7L7V1 743 aaKnown RBP14.33□□□□□ -0.12
CLDN4-203ENST00000435050 NUP133Q8WUM0 1156 aa14.33□□□□□ -0.12
CLDN4-203ENST00000435050 KLF18A0A0U1RQI7 1052 aa14.33□□□□□ -0.12
CLDN4-203ENST00000435050 HMGB1P09429 215 aaKnown RBP14.33□□□□□ -0.12
CLDN4-203ENST00000435050 GIMAP6Q6P9H5 292 aa14.33□□□□□ -0.12
CLDN4-203ENST00000435050 CDC37L1Q7L3B6 337 aa14.33□□□□□ -0.12
CLDN4-203ENST00000435050 TM6SF1Q9BZW5 370 aa14.33□□□□□ -0.12
CLDN4-203ENST00000435050 USP42Q9H9J4 1324 aaKnown RBP14.33□□□□□ -0.12
CLDN4-203ENST00000435050 GNL3LQ9NVN8 582 aaKnown RBP14.33□□□□□ -0.12
CLDN4-203ENST00000435050 ISY1Q9ULR0 285 aaKnown RBP14.33□□□□□ -0.12
CLDN4-203ENST00000435050 MICU3Q86XE3 530 aa14.33□□□□□ -0.12
CLDN4-203ENST00000435050 VSIG10Q8N0Z9 540 aa14.33□□□□□ -0.12
CLDN4-203ENST00000435050 OSBP2Q969R2 916 aa14.33□□□□□ -0.12
CLDN4-203ENST00000435050 ERICH2A1L162 156 aa14.32□□□□□ -0.12
CLDN4-203ENST00000435050 ANKRD18AQ8IVF6 992 aa14.32□□□□□ -0.12
CLDN4-203ENST00000435050 CDC5LQ99459 802 aaKnown RBP14.32□□□□□ -0.12
CLDN4-203ENST00000435050 ZFYP08048 801 aaPredicted RBP14.32□□□□□ -0.12
CLDN4-203ENST00000435050 LRP10Q7Z4F1 713 aa14.32□□□□□ -0.12
CLDN4-203ENST00000435050 CKAP2LQ8IYA6 745 aa14.32□□□□□ -0.12
CLDN4-203ENST00000435050 MAST3O60307 1309 aa14.32□□□□□ -0.12
CLDN4-203ENST00000435050 M0R2C6 588 aa14.32□□□□□ -0.12
CLDN4-203ENST00000435050 EPB41L2O43491 1005 aaKnown RBP14.32□□□□□ -0.12
CLDN4-203ENST00000435050 ME1P48163 572 aa14.32□□□□□ -0.12
CLDN4-203ENST00000435050 MARCH10Q8NA82 808 aaPredicted RBP14.32□□□□□ -0.12
CLDN4-203ENST00000435050 PRC1O43663 620 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 CCDC102BQ68D86 513 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 TTC14Q96N46 770 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 AK9Q5TCS8 1911 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 RGPD5Q99666 1765 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 CASP7P55210 303 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 TRIM29Q14134 588 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 TTF1Q15361 905 aaPredicted RBP14.31□□□□□ -0.12
CLDN4-203ENST00000435050 SETDB2Q96T68 719 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 NACAP1Q9BZK3 213 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 USP21Q9UK80 565 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 E7EWF7 191 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 POLR3DP05423 398 aaPredicted RBP14.31□□□□□ -0.12
CLDN4-203ENST00000435050 UQCRFS1P1P0C7P4 283 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 APPBP2Q92624 585 aa14.31□□□□□ -0.12
CLDN4-203ENST00000435050 PUM3Q15397 648 aaKnown RBP14.3□□□□□ -0.12
CLDN4-203ENST00000435050 CAVIN4Q5BKX8 364 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 OTUD7BQ6GQQ9 843 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 NCOA7Q8NI08 942 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 SLC4A9Q96Q91 983 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 A0A0G2JLW4 131 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 PDE8BO95263 885 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 BCAMP50895 628 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 ZNF532Q9HCE3 1301 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 CIAO1O76071 339 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 MBD4O95243 580 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 PIBF1Q8WXW3 757 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 PUS7LQ9H0K6 701 aaKnown RBP14.3□□□□□ -0.12
CLDN4-203ENST00000435050 RBSNQ9H1K0 784 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 ARMT1Q9H993 441 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 GPHNQ9NQX3 736 aaPredicted RBP14.3□□□□□ -0.12
CLDN4-203ENST00000435050 CCNL1Q9UK58 526 aaPredicted RBP14.3□□□□□ -0.12
CLDN4-203ENST00000435050 PTPDC1A2A3K4 754 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 RFC4P35249 363 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 COL9A3Q14050 684 aaPredicted RBP14.3□□□□□ -0.12
CLDN4-203ENST00000435050 ZMYM1Q5SVZ6 1142 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 CCDC73Q6ZRK6 1079 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 ANKIB1Q9P2G1 1089 aa14.3□□□□□ -0.12
CLDN4-203ENST00000435050 DHX16O60231 1041 aaKnown RBP14.29□□□□□ -0.12
CLDN4-203ENST00000435050 CYP7A1P22680 504 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 MCM5P33992 734 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 TNMDQ9H2S6 317 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 MTMR6Q9Y217 621 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 FAM208AQ9UK61 1670 aaKnown RBP14.29□□□□□ -0.12
CLDN4-203ENST00000435050 FGAP02671 866 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 UBE2HP62256 183 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 AKAP17AQ02040 695 aaKnown RBP14.29□□□□□ -0.12
CLDN4-203ENST00000435050 ZKSCAN3Q9BRR0 538 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 ORC3Q9UBD5 711 aaPredicted RBP14.29□□□□□ -0.12
CLDN4-203ENST00000435050 VIRMAQ69YN4 1812 aaKnown RBP14.29□□□□□ -0.12
CLDN4-203ENST00000435050 PALLDQ8WX93 1383 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 CCDC69A6NI79 296 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 IFIT3O14879 490 aaKnown RBP14.29□□□□□ -0.12
CLDN4-203ENST00000435050 CCDC173Q0VFZ6 552 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 STK38Q15208 465 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 LPIN2Q92539 896 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 AK7Q96M32 723 aa14.29□□□□□ -0.12
CLDN4-203ENST00000435050 A0A0U1RQG5 324 aaPredicted RBP14.28□□□□□ -0.12
CLDN4-203ENST00000435050 B4E1Z4 1266 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 CCDC183Q5T5S1 534 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 SASS6Q6UVJ0 657 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 C8orf76Q96K31 380 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 GPR108Q9NPR9 543 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 SLC4A4Q9Y6R1 1079 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 G3V3G9 751 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 MCAMP43121 646 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 DCAF8Q5TAQ9 597 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 LRSAM1Q6UWE0 723 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 NLRP3Q96P20 1036 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 NUP62CLQ9H1M0 184 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 SRP68Q9UHB9 627 aaKnown RBP14.28□□□□□ -0.12
CLDN4-203ENST00000435050 GYG1P46976 350 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms