RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 MAP3K15Q6ZN16 1313 aa21.97■■□□□ 1.11
CLK1-205ENST00000434813 CDHR2Q9BYE9 1310 aa21.97■■□□□ 1.11
CLK1-205ENST00000434813 LRRFIP1Q32MZ4 808 aaKnown RBP21.97■■□□□ 1.11
CLK1-205ENST00000434813 CCDC158Q5M9N0 1113 aa21.97■■□□□ 1.11
CLK1-205ENST00000434813 FAM173BQ6P4H8 233 aa21.97■■□□□ 1.11
CLK1-205ENST00000434813 EXOSC10Q01780 885 aaKnown RBP21.97■■□□□ 1.11
CLK1-205ENST00000434813 SCRN1Q12765 414 aa21.97■■□□□ 1.11
CLK1-205ENST00000434813 GIMAP6Q6P9H5 292 aa21.97■■□□□ 1.11
CLK1-205ENST00000434813 C8orf37Q96NL8 207 aa21.97■■□□□ 1.11
CLK1-205ENST00000434813 OFD1O75665 1012 aa21.96■■□□□ 1.11
CLK1-205ENST00000434813 FGD1P98174 961 aa21.96■■□□□ 1.11
CLK1-205ENST00000434813 TTC39AQ5SRH9 613 aa21.96■■□□□ 1.11
CLK1-205ENST00000434813 GIGYF2Q6Y7W6 1299 aaKnown RBP21.96■■□□□ 1.11
CLK1-205ENST00000434813 NGLY1Q96IV0 654 aa21.96■■□□□ 1.11
CLK1-205ENST00000434813 RESTQ13127 1097 aa21.96■■□□□ 1.11
CLK1-205ENST00000434813 BARGINQ6ZT62 677 aa21.96■■□□□ 1.11
CLK1-205ENST00000434813 FAM89AQ96GI7 184 aa21.96■■□□□ 1.11
CLK1-205ENST00000434813 XAGE2Q96GT9 111 aa21.96■■□□□ 1.11
CLK1-205ENST00000434813 SPATA32Q96LK8 384 aa21.96■■□□□ 1.11
CLK1-205ENST00000434813 LRRC2Q9BYS8 371 aa21.96■■□□□ 1.11
CLK1-205ENST00000434813 E7EWF7 191 aa21.95■■□□□ 1.1
CLK1-205ENST00000434813 M0R2C6 588 aa21.95■■□□□ 1.1
CLK1-205ENST00000434813 ZFYP08048 801 aaPredicted RBP21.95■■□□□ 1.1
CLK1-205ENST00000434813 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.95■■□□□ 1.1
CLK1-205ENST00000434813 ADORA1P30542 326 aa21.94■■□□□ 1.1
CLK1-205ENST00000434813 IFIT5Q13325 482 aaKnown RBP21.94■■□□□ 1.1
CLK1-205ENST00000434813 LEO1Q8WVC0 666 aaPredicted RBP21.94■■□□□ 1.1
CLK1-205ENST00000434813 TAF7LQ5H9L4 462 aa21.94■■□□□ 1.1
CLK1-205ENST00000434813 GORABQ5T7V8 394 aa21.94■■□□□ 1.1
CLK1-205ENST00000434813 NSUN7Q8NE18 718 aaKnown RBP21.94■■□□□ 1.1
CLK1-205ENST00000434813 ZSCAN16Q9H4T2 348 aaPredicted RBP21.94■■□□□ 1.1
CLK1-205ENST00000434813 USP25Q9UHP3 1055 aa21.94■■□□□ 1.1
CLK1-205ENST00000434813 MYH15Q9Y2K3 1946 aa21.94■■□□□ 1.1
CLK1-205ENST00000434813 A0A0G2JS52 829 aa21.93■■□□□ 1.1
CLK1-205ENST00000434813 FKBP4Q02790 459 aaKnown RBP eCLIP21.93■■□□□ 1.1
CLK1-205ENST00000434813 HSP90AB3PQ58FF7 597 aa21.93■■□□□ 1.1
CLK1-205ENST00000434813 OSBP2Q969R2 916 aa21.93■■□□□ 1.1
CLK1-205ENST00000434813 NUP62CLQ9H1M0 184 aa21.93■■□□□ 1.1
CLK1-205ENST00000434813 MYH3P11055 1940 aa21.93■■□□□ 1.1
CLK1-205ENST00000434813 MYH7P12883 1935 aa21.93■■□□□ 1.1
CLK1-205ENST00000434813 H3BQV1 296 aa21.92■■□□□ 1.1
CLK1-205ENST00000434813 LIG1P18858 919 aa21.92■■□□□ 1.1
CLK1-205ENST00000434813 HMGN5P82970 282 aaKnown RBP21.92■■□□□ 1.1
CLK1-205ENST00000434813 IFFO2Q5TF58 517 aa21.92■■□□□ 1.1
CLK1-205ENST00000434813 FBXL16Q8N461 479 aa21.92■■□□□ 1.1
CLK1-205ENST00000434813 PTMAP06454 111 aaKnown RBP21.92■■□□□ 1.1
CLK1-205ENST00000434813 CCDC192P0DO97 292 aa21.92■■□□□ 1.1
CLK1-205ENST00000434813 NAA16Q6N069 864 aaPredicted RBP21.92■■□□□ 1.1
CLK1-205ENST00000434813 NLRP10Q86W26 655 aa21.92■■□□□ 1.1
CLK1-205ENST00000434813 A0A0G2JLW4 131 aa21.91■■□□□ 1.1
CLK1-205ENST00000434813 APOBRQ0VD83 1088 aa21.91■■□□□ 1.1
CLK1-205ENST00000434813 DDX11Q96FC9 970 aa21.91■■□□□ 1.1
CLK1-205ENST00000434813 KIF3AQ9Y496 699 aa21.91■■□□□ 1.1
CLK1-205ENST00000434813 SALL1Q9NSC2 1324 aa21.91■■□□□ 1.1
CLK1-205ENST00000434813 MAP3K11Q16584 847 aa21.9■■□□□ 1.1
CLK1-205ENST00000434813 CCDC85AQ96PX6 553 aaPredicted RBP21.9■■□□□ 1.1
CLK1-205ENST00000434813 DDX19AQ9NUU7 478 aaKnown RBP21.9■■□□□ 1.1
CLK1-205ENST00000434813 TFIP11Q9UBB9 837 aaKnown RBP21.9■■□□□ 1.1
CLK1-205ENST00000434813 CTNNA3Q9UI47 895 aa21.9■■□□□ 1.1
CLK1-205ENST00000434813 LRP5O75197 1615 aa21.9■■□□□ 1.1
CLK1-205ENST00000434813 DDX60Q8IY21 1712 aaKnown RBP21.9■■□□□ 1.1
CLK1-205ENST00000434813 PTPDC1A2A3K4 754 aa21.9■■□□□ 1.1
CLK1-205ENST00000434813 GOLGA6L4A6NEF3 574 aa21.9■■□□□ 1.1
CLK1-205ENST00000434813 FOXP2O15409 715 aa21.9■■□□□ 1.1
CLK1-205ENST00000434813 KDM4AO75164 1064 aa21.9■■□□□ 1.1
CLK1-205ENST00000434813 CTDNEP1O95476 244 aa21.9■■□□□ 1.1
CLK1-205ENST00000434813 ADCY5O95622 1261 aa21.9■■□□□ 1.1
CLK1-205ENST00000434813 CYP19A1P11511 503 aaPredicted RBP21.9■■□□□ 1.1
CLK1-205ENST00000434813 SCARF1Q14162 830 aa21.9■■□□□ 1.1
CLK1-205ENST00000434813 HLFQ16534 295 aa21.9■■□□□ 1.1
CLK1-205ENST00000434813 MARCH10Q8NA82 808 aaPredicted RBP21.9■■□□□ 1.1
CLK1-205ENST00000434813 ZNF274Q96GC6 653 aaPredicted RBP21.9■■□□□ 1.1
CLK1-205ENST00000434813 KAT6BQ8WYB5 2073 aa21.89■■□□□ 1.1
CLK1-205ENST00000434813 ATP2B3Q16720 1220 aa21.89■■□□□ 1.1
CLK1-205ENST00000434813 APPBP2Q92624 585 aa21.89■■□□□ 1.1
CLK1-205ENST00000434813 CHMP4CQ96CF2 233 aa21.89■■□□□ 1.1
CLK1-205ENST00000434813 RIPOR2Q9Y4F9 1068 aa21.89■■□□□ 1.1
CLK1-205ENST00000434813 DOT1LQ8TEK3 1739 aa21.89■■□□□ 1.1
CLK1-205ENST00000434813 CTSWP56202 376 aa21.89■■□□□ 1.09
CLK1-205ENST00000434813 VPS72Q15906 364 aa21.89■■□□□ 1.09
CLK1-205ENST00000434813 TTLL11Q8NHH1 800 aa21.89■■□□□ 1.09
CLK1-205ENST00000434813 ITGA6P23229 1130 aa21.88■■□□□ 1.09
CLK1-205ENST00000434813 ZAP70P43403 619 aa21.88■■□□□ 1.09
CLK1-205ENST00000434813 EVCP57679 992 aa21.88■■□□□ 1.09
CLK1-205ENST00000434813 FAM98CQ17RN3 349 aaKnown RBP21.88■■□□□ 1.09
CLK1-205ENST00000434813 TTLL5Q6EMB2 1281 aa21.88■■□□□ 1.09
CLK1-205ENST00000434813 RBM43Q6ZSC3 357 aaKnown RBP21.88■■□□□ 1.09
CLK1-205ENST00000434813 ACSBG1Q96GR2 724 aa21.88■■□□□ 1.09
CLK1-205ENST00000434813 SLC4A9Q96Q91 983 aa21.88■■□□□ 1.09
CLK1-205ENST00000434813 DACT1Q9NYF0 836 aa21.88■■□□□ 1.09
CLK1-205ENST00000434813 CFAP45Q9UL16 551 aa21.88■■□□□ 1.09
CLK1-205ENST00000434813 AKAP11Q9UKA4 1901 aa21.88■■□□□ 1.09
CLK1-205ENST00000434813 NUP98P52948 1817 aa21.88■■□□□ 1.09
CLK1-205ENST00000434813 ATRNO75882 1429 aa21.88■■□□□ 1.09
CLK1-205ENST00000434813 GPTP24298 496 aa21.87■■□□□ 1.09
CLK1-205ENST00000434813 WASHC4Q2M389 1173 aa21.87■■□□□ 1.09
CLK1-205ENST00000434813 METTL24Q5JXM2 366 aa21.87■■□□□ 1.09
CLK1-205ENST00000434813 ZNF512BQ96KM6 892 aaPredicted RBP21.87■■□□□ 1.09
CLK1-205ENST00000434813 GREM2Q9H772 168 aa21.87■■□□□ 1.09
CLK1-205ENST00000434813 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms