RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 BSDC1Q9NW68 430 aaPredicted RBP17.17■□□□□ 0.34
CDC42EP1-204ENST00000434728 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
CDC42EP1-204ENST00000434728 UBE3BQ7Z3V4 1068 aa17.16■□□□□ 0.34
CDC42EP1-204ENST00000434728 RASAL3Q86YV0 1011 aa17.16■□□□□ 0.34
CDC42EP1-204ENST00000434728 TTLL11Q8NHH1 800 aa17.16■□□□□ 0.34
CDC42EP1-204ENST00000434728 TSR2Q969E8 191 aaKnown RBP17.16■□□□□ 0.34
CDC42EP1-204ENST00000434728 CSRNP1Q96S65 589 aa17.16■□□□□ 0.34
CDC42EP1-204ENST00000434728 GREM2Q9H772 168 aa17.16■□□□□ 0.34
CDC42EP1-204ENST00000434728 MINPP1Q9UNW1 487 aa17.16■□□□□ 0.34
CDC42EP1-204ENST00000434728 SCAF8Q9UPN6 1271 aaKnown RBP17.16■□□□□ 0.34
CDC42EP1-204ENST00000434728 MYO3BQ8WXR4 1341 aa17.16■□□□□ 0.34
CDC42EP1-204ENST00000434728 PDE4DIPQ5VU43 2346 aa17.15■□□□□ 0.34
CDC42EP1-204ENST00000434728 KCNJ4P48050 445 aa17.15■□□□□ 0.34
CDC42EP1-204ENST00000434728 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
CDC42EP1-204ENST00000434728 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
CDC42EP1-204ENST00000434728 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
CDC42EP1-204ENST00000434728 GMLQ99445 158 aa17.15■□□□□ 0.34
CDC42EP1-204ENST00000434728 MPHOSPH8Q99549 860 aa17.15■□□□□ 0.34
CDC42EP1-204ENST00000434728 IGKV5-2P06315 115 aa17.14■□□□□ 0.33
CDC42EP1-204ENST00000434728 COA1Q9GZY4 146 aa17.14■□□□□ 0.33
CDC42EP1-204ENST00000434728 HDAC9Q9UKV0 1011 aa17.14■□□□□ 0.33
CDC42EP1-204ENST00000434728 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
CDC42EP1-204ENST00000434728 UBE2Q2LH0YL09 131 aa17.13■□□□□ 0.33
CDC42EP1-204ENST00000434728 SOX10P56693 466 aa17.13■□□□□ 0.33
CDC42EP1-204ENST00000434728 TWISTNBQ3B726 338 aaPredicted RBP17.13■□□□□ 0.33
CDC42EP1-204ENST00000434728 NBPF9Q3BBW0 867 aa17.13■□□□□ 0.33
CDC42EP1-204ENST00000434728 STRIP1Q5VSL9 837 aa17.13■□□□□ 0.33
CDC42EP1-204ENST00000434728 PRAMEF18Q5VWM3 479 aa17.13■□□□□ 0.33
CDC42EP1-204ENST00000434728 CTU1Q7Z7A3 348 aaKnown RBP17.13■□□□□ 0.33
CDC42EP1-204ENST00000434728 MXD3Q9BW11 206 aa17.13■□□□□ 0.33
CDC42EP1-204ENST00000434728 MYH16Q9H6N6 1097 aa17.13■□□□□ 0.33
CDC42EP1-204ENST00000434728 LEMD3Q9Y2U8 911 aa17.13■□□□□ 0.33
CDC42EP1-204ENST00000434728 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
CDC42EP1-204ENST00000434728 DACT2Q5SW24 774 aa17.12■□□□□ 0.33
CDC42EP1-204ENST00000434728 MOB2Q70IA6 237 aa17.12■□□□□ 0.33
CDC42EP1-204ENST00000434728 ANKRD2Q9GZV1 360 aa17.12■□□□□ 0.33
CDC42EP1-204ENST00000434728 WTIPA6NIX2 430 aaPredicted RBP17.11■□□□□ 0.33
CDC42EP1-204ENST00000434728 SASH1O94885 1247 aa17.11■□□□□ 0.33
CDC42EP1-204ENST00000434728 ITGA6P23229 1130 aa17.11■□□□□ 0.33
CDC42EP1-204ENST00000434728 FKBP5Q13451 457 aaPredicted RBP17.11■□□□□ 0.33
CDC42EP1-204ENST00000434728 TTLL5Q6EMB2 1281 aa17.11■□□□□ 0.33
CDC42EP1-204ENST00000434728 ZNF804BA4D1E1 1349 aa17.11■□□□□ 0.33
CDC42EP1-204ENST00000434728 WNT10BO00744 389 aa17.1■□□□□ 0.33
CDC42EP1-204ENST00000434728 SLC34A2O95436 690 aa17.1■□□□□ 0.33
CDC42EP1-204ENST00000434728 MKRN3Q13064 507 aaKnown RBP17.1■□□□□ 0.33
CDC42EP1-204ENST00000434728 PRKG1Q13976 671 aa17.1■□□□□ 0.33
CDC42EP1-204ENST00000434728 ARMC9Q7Z3E5 817 aa17.1■□□□□ 0.33
CDC42EP1-204ENST00000434728 APOBEC3FQ8IUX4 373 aaKnown RBP17.1■□□□□ 0.33
CDC42EP1-204ENST00000434728 KIAA0825Q8IV33 1275 aa17.1■□□□□ 0.33
CDC42EP1-204ENST00000434728 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
CDC42EP1-204ENST00000434728 MMP14P50281 582 aa17.09■□□□□ 0.33
CDC42EP1-204ENST00000434728 SREBF2Q12772 1141 aa17.09■□□□□ 0.33
CDC42EP1-204ENST00000434728 FLIIQ13045 1269 aa17.09■□□□□ 0.33
CDC42EP1-204ENST00000434728 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.09■□□□□ 0.33
CDC42EP1-204ENST00000434728 TNRC18O15417 2968 aaPredicted RBP17.09■□□□□ 0.33
CDC42EP1-204ENST00000434728 H7C1W4 665 aa17.08■□□□□ 0.32
CDC42EP1-204ENST00000434728 TBC1D8O95759 1140 aa17.08■□□□□ 0.32
CDC42EP1-204ENST00000434728 GTF2IP78347 998 aa17.08■□□□□ 0.32
CDC42EP1-204ENST00000434728 GCKRQ14397 625 aa17.08■□□□□ 0.32
CDC42EP1-204ENST00000434728 G2E3Q7L622 706 aa17.08■□□□□ 0.32
CDC42EP1-204ENST00000434728 TXNRD3Q86VQ6 643 aa17.08■□□□□ 0.32
CDC42EP1-204ENST00000434728 ANKRD18BA2A2Z9 1011 aa17.07■□□□□ 0.32
CDC42EP1-204ENST00000434728 PKN2Q16513 984 aaKnown RBP17.07■□□□□ 0.32
CDC42EP1-204ENST00000434728 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
CDC42EP1-204ENST00000434728 DNAAF4Q8WXU2 420 aa17.07■□□□□ 0.32
CDC42EP1-204ENST00000434728 CACNA1FO60840 1977 aa17.06■□□□□ 0.32
CDC42EP1-204ENST00000434728 CHRNDQ07001 517 aa17.06■□□□□ 0.32
CDC42EP1-204ENST00000434728 DLGAP5Q15398 846 aa17.06■□□□□ 0.32
CDC42EP1-204ENST00000434728 CCDC27Q2M243 656 aa17.06■□□□□ 0.32
CDC42EP1-204ENST00000434728 LINS1Q8NG48 757 aa17.06■□□□□ 0.32
CDC42EP1-204ENST00000434728 ZNF296Q8WUU4 475 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP1-204ENST00000434728 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
CDC42EP1-204ENST00000434728 MYO1BO43795 1136 aa17.05■□□□□ 0.32
CDC42EP1-204ENST00000434728 KLRK1P26718 216 aa17.05■□□□□ 0.32
CDC42EP1-204ENST00000434728 IFIT5Q13325 482 aaKnown RBP17.05■□□□□ 0.32
CDC42EP1-204ENST00000434728 TAF7LQ5H9L4 462 aa17.05■□□□□ 0.32
CDC42EP1-204ENST00000434728 ZNF804AQ7Z570 1209 aa17.05■□□□□ 0.32
CDC42EP1-204ENST00000434728 ANGEL1Q9UNK9 670 aaKnown RBP17.05■□□□□ 0.32
CDC42EP1-204ENST00000434728 HPS5Q9UPZ3 1129 aa17.05■□□□□ 0.32
CDC42EP1-204ENST00000434728 ZNF646O15015 1829 aaPredicted RBP17.05■□□□□ 0.32
CDC42EP1-204ENST00000434728 IL16Q14005 1332 aa17.04■□□□□ 0.32
CDC42EP1-204ENST00000434728 F8W031 263 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP1-204ENST00000434728 GPR25O00155 361 aa17.03■□□□□ 0.32
CDC42EP1-204ENST00000434728 TM4SF4P48230 202 aa17.03■□□□□ 0.32
CDC42EP1-204ENST00000434728 PTPN12Q05209 780 aaKnown RBP17.03■□□□□ 0.32
CDC42EP1-204ENST00000434728 HELBQ8NG08 1087 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP1-204ENST00000434728 CD209Q9NNX6 404 aa17.03■□□□□ 0.32
CDC42EP1-204ENST00000434728 SALL2Q9Y467 1007 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP1-204ENST00000434728 COL1A1P02452 1464 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP1-204ENST00000434728 FANCIQ9NVI1 1328 aa17.02■□□□□ 0.32
CDC42EP1-204ENST00000434728 PPP1R12BO60237 982 aaPredicted RBP17.02■□□□□ 0.32
CDC42EP1-204ENST00000434728 TAF5LO75529 589 aa17.02■□□□□ 0.32
CDC42EP1-204ENST00000434728 CSF1RP07333 972 aa17.02■□□□□ 0.32
CDC42EP1-204ENST00000434728 RBM5P52756 815 aaKnown RBP eCLIP17.02■□□□□ 0.32
CDC42EP1-204ENST00000434728 SLC10A4Q96EP9 437 aa17.02■□□□□ 0.32
CDC42EP1-204ENST00000434728 DEFB129Q9H1M3 183 aa17.02■□□□□ 0.32
CDC42EP1-204ENST00000434728 PLIN1O60240 522 aa17.01■□□□□ 0.31
CDC42EP1-204ENST00000434728 FKTNO75072 461 aa17.01■□□□□ 0.31
CDC42EP1-204ENST00000434728 ALDH1A1P00352 501 aa17.01■□□□□ 0.31
CDC42EP1-204ENST00000434728 CCDC57Q2TAC2 916 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms