RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 DBNDD2Q9BQY9 259 aa28.46■■■□□ 2.15
SMARCAL1-208ENST00000434435 TLR7Q9NYK1 1049 aaKnown RBP28.46■■■□□ 2.15
SMARCAL1-208ENST00000434435 SALL3Q9BXA9 1300 aa28.45■■■□□ 2.15
SMARCAL1-208ENST00000434435 AK9Q5TCS8 1911 aa28.45■■■□□ 2.15
SMARCAL1-208ENST00000434435 C6orf229H3BNL8 230 aa28.45■■■□□ 2.14
SMARCAL1-208ENST00000434435 RTKN2Q8IZC4 609 aa28.45■■■□□ 2.14
SMARCAL1-208ENST00000434435 OTUD7AQ8TE49 926 aaPredicted RBP28.45■■■□□ 2.14
SMARCAL1-208ENST00000434435 MX1P20591 662 aa28.44■■■□□ 2.14
SMARCAL1-208ENST00000434435 ADORA1P30542 326 aa28.44■■■□□ 2.14
SMARCAL1-208ENST00000434435 GORABQ5T7V8 394 aa28.44■■■□□ 2.14
SMARCAL1-208ENST00000434435 POLLQ9UGP5 575 aa28.44■■■□□ 2.14
SMARCAL1-208ENST00000434435 CCDC88AQ3V6T2 1871 aa28.44■■■□□ 2.14
SMARCAL1-208ENST00000434435 MED23Q9ULK4 1368 aa28.43■■■□□ 2.14
SMARCAL1-208ENST00000434435 SKAP1Q86WV1 359 aa28.43■■■□□ 2.14
SMARCAL1-208ENST00000434435 SUPT20HQ8NEM7 779 aa28.43■■■□□ 2.14
SMARCAL1-208ENST00000434435 AKAP11Q9UKA4 1901 aa28.42■■■□□ 2.14
SMARCAL1-208ENST00000434435 WTIPA6NIX2 430 aaPredicted RBP28.42■■■□□ 2.14
SMARCAL1-208ENST00000434435 RGS3P49796 1198 aa28.42■■■□□ 2.14
SMARCAL1-208ENST00000434435 PLEKHM2Q8IWE5 1019 aa28.42■■■□□ 2.14
SMARCAL1-208ENST00000434435 EYA3Q99504 573 aa28.42■■■□□ 2.14
SMARCAL1-208ENST00000434435 RTFDC1Q9BY42 306 aaPredicted RBP28.42■■■□□ 2.14
SMARCAL1-208ENST00000434435 TTC41PQ6P2S7 1318 aa28.42■■■□□ 2.14
SMARCAL1-208ENST00000434435 C15orf52Q6ZUT6 534 aaKnown RBP28.41■■■□□ 2.14
SMARCAL1-208ENST00000434435 CHD4Q14839 1912 aa28.41■■■□□ 2.14
SMARCAL1-208ENST00000434435 AOX1Q06278 1338 aa28.41■■■□□ 2.14
SMARCAL1-208ENST00000434435 IRS2Q9Y4H2 1338 aa28.41■■■□□ 2.14
SMARCAL1-208ENST00000434435 KLRK1P26718 216 aa28.4■■■□□ 2.14
SMARCAL1-208ENST00000434435 PDE1AP54750 535 aa28.4■■■□□ 2.14
SMARCAL1-208ENST00000434435 CAVIN4Q5BKX8 364 aa28.4■■■□□ 2.14
SMARCAL1-208ENST00000434435 CCDC158Q5M9N0 1113 aa28.4■■■□□ 2.14
SMARCAL1-208ENST00000434435 GPR101Q96P66 508 aaPredicted RBP28.4■■■□□ 2.14
SMARCAL1-208ENST00000434435 PSMD1Q99460 953 aa28.4■■■□□ 2.14
SMARCAL1-208ENST00000434435 ECHDC1Q9NTX5 307 aa28.4■■■□□ 2.14
SMARCAL1-208ENST00000434435 STAP2Q9UGK3 403 aa28.4■■■□□ 2.14
SMARCAL1-208ENST00000434435 FKBP4Q02790 459 aaKnown RBP eCLIP28.38■■■□□ 2.13
SMARCAL1-208ENST00000434435 TTC39AQ5SRH9 613 aa28.38■■■□□ 2.13
SMARCAL1-208ENST00000434435 CCDC102BQ68D86 513 aa28.38■■■□□ 2.13
SMARCAL1-208ENST00000434435 OSBPL3Q9H4L5 887 aa28.38■■■□□ 2.13
SMARCAL1-208ENST00000434435 ERC2O15083 957 aa28.37■■■□□ 2.13
SMARCAL1-208ENST00000434435 PHKA1P46020 1223 aa28.37■■■□□ 2.13
SMARCAL1-208ENST00000434435 GYG1P46976 350 aa28.37■■■□□ 2.13
SMARCAL1-208ENST00000434435 WASHC4Q2M389 1173 aa28.37■■■□□ 2.13
SMARCAL1-208ENST00000434435 TSHZ3Q63HK5 1081 aa28.37■■■□□ 2.13
SMARCAL1-208ENST00000434435 ZNF804AQ7Z570 1209 aa28.37■■■□□ 2.13
SMARCAL1-208ENST00000434435 VPS37DQ86XT2 251 aa28.37■■■□□ 2.13
SMARCAL1-208ENST00000434435 ZC3H12CQ9C0D7 883 aaKnown RBP28.37■■■□□ 2.13
SMARCAL1-208ENST00000434435 DICER1Q9UPY3 1922 aaKnown RBP28.36■■■□□ 2.13
SMARCAL1-208ENST00000434435 TXNRD3Q86VQ6 643 aa28.36■■■□□ 2.13
SMARCAL1-208ENST00000434435 FAM84BQ96KN1 310 aaPredicted RBP28.36■■■□□ 2.13
SMARCAL1-208ENST00000434435 SBF1O95248 1867 aa28.36■■■□□ 2.13
SMARCAL1-208ENST00000434435 UQCRFS1P1P0C7P4 283 aa28.35■■■□□ 2.13
SMARCAL1-208ENST00000434435 HIBADHP31937 336 aaKnown RBP28.35■■■□□ 2.13
SMARCAL1-208ENST00000434435 BCAMP50895 628 aa28.35■■■□□ 2.13
SMARCAL1-208ENST00000434435 FBXO33Q7Z6M2 555 aa28.35■■■□□ 2.13
SMARCAL1-208ENST00000434435 PELP1Q8IZL8 1130 aaKnown RBP28.35■■■□□ 2.13
SMARCAL1-208ENST00000434435 TAOK3Q9H2K8 898 aa28.35■■■□□ 2.13
SMARCAL1-208ENST00000434435 GNL3LQ9NVN8 582 aaKnown RBP28.35■■■□□ 2.13
SMARCAL1-208ENST00000434435 LTBP3Q9NS15 1303 aa28.35■■■□□ 2.13
SMARCAL1-208ENST00000434435 PSME4Q14997 1843 aa28.34■■■□□ 2.13
SMARCAL1-208ENST00000434435 RIMBP2O15034 1052 aa28.34■■■□□ 2.13
SMARCAL1-208ENST00000434435 GLRX3O76003 335 aaKnown RBP28.34■■■□□ 2.13
SMARCAL1-208ENST00000434435 ATP5JP18859 108 aa28.34■■■□□ 2.13
SMARCAL1-208ENST00000434435 ARID4AP29374 1257 aaPredicted RBP28.34■■■□□ 2.13
SMARCAL1-208ENST00000434435 PI4K2BQ8TCG2 481 aa28.34■■■□□ 2.13
SMARCAL1-208ENST00000434435 ZNF512BQ96KM6 892 aaPredicted RBP28.34■■■□□ 2.13
SMARCAL1-208ENST00000434435 MYH7P12883 1935 aa28.33■■■□□ 2.13
SMARCAL1-208ENST00000434435 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.33■■■□□ 2.13
SMARCAL1-208ENST00000434435 NFKBIEO00221 500 aa28.32■■■□□ 2.12
SMARCAL1-208ENST00000434435 KIAA2012Q0VF49 1180 aa28.32■■■□□ 2.12
SMARCAL1-208ENST00000434435 VPS33BQ9H267 617 aa28.32■■■□□ 2.12
SMARCAL1-208ENST00000434435 MYO5AQ9Y4I1 1855 aaKnown RBP28.32■■■□□ 2.12
SMARCAL1-208ENST00000434435 G3V3G9 751 aa28.31■■■□□ 2.12
SMARCAL1-208ENST00000434435 PPIP5K2O43314 1243 aa28.31■■■□□ 2.12
SMARCAL1-208ENST00000434435 AOC3Q16853 763 aa28.31■■■□□ 2.12
SMARCAL1-208ENST00000434435 DCAF8Q5TAQ9 597 aa28.31■■■□□ 2.12
SMARCAL1-208ENST00000434435 COA1Q9GZY4 146 aa28.31■■■□□ 2.12
SMARCAL1-208ENST00000434435 DOCK2Q92608 1830 aa28.31■■■□□ 2.12
SMARCAL1-208ENST00000434435 YBX3P16989 372 aaKnown RBP eCLIP28.3■■■□□ 2.12
SMARCAL1-208ENST00000434435 TTC22Q5TAA0 569 aa28.3■■■□□ 2.12
SMARCAL1-208ENST00000434435 BOLA2Q9H3K6 86 aa28.3■■■□□ 2.12
SMARCAL1-208ENST00000434435 ZNF277Q9NRM2 450 aaPredicted RBP28.3■■■□□ 2.12
SMARCAL1-208ENST00000434435 SCN9AQ15858 1988 aa28.3■■■□□ 2.12
SMARCAL1-208ENST00000434435 SEMA3EO15041 775 aa28.29■■■□□ 2.12
SMARCAL1-208ENST00000434435 CD209Q9NNX6 404 aa28.29■■■□□ 2.12
SMARCAL1-208ENST00000434435 ZNF646O15015 1829 aaPredicted RBP28.29■■■□□ 2.12
SMARCAL1-208ENST00000434435 ZBTB22O15209 634 aa28.28■■■□□ 2.12
SMARCAL1-208ENST00000434435 FRAT2O75474 233 aaPredicted RBP28.28■■■□□ 2.12
SMARCAL1-208ENST00000434435 IARSP41252 1262 aaKnown RBP28.28■■■□□ 2.12
SMARCAL1-208ENST00000434435 MCAMP43121 646 aa28.28■■■□□ 2.12
SMARCAL1-208ENST00000434435 RASSF7Q02833 373 aa28.28■■■□□ 2.12
SMARCAL1-208ENST00000434435 ARHGAP27Q6ZUM4 889 aa28.28■■■□□ 2.12
SMARCAL1-208ENST00000434435 HAUS7Q99871 368 aa28.28■■■□□ 2.12
SMARCAL1-208ENST00000434435 IL1R1P14778 569 aa28.27■■■□□ 2.12
SMARCAL1-208ENST00000434435 RASGRF1Q13972 1273 aa28.27■■■□□ 2.12
SMARCAL1-208ENST00000434435 SCARF1Q14162 830 aa28.27■■■□□ 2.12
SMARCAL1-208ENST00000434435 LARGE2Q8N3Y3 721 aa28.27■■■□□ 2.12
SMARCAL1-208ENST00000434435 TDRD7Q8NHU6 1098 aaKnown RBP28.27■■■□□ 2.12
SMARCAL1-208ENST00000434435 DENND2AQ9ULE3 1009 aa28.27■■■□□ 2.12
SMARCAL1-208ENST00000434435 IQSEC3Q9UPP2 1182 aaPredicted RBP28.27■■■□□ 2.12
SMARCAL1-208ENST00000434435 COL1A1P02452 1464 aaPredicted RBP28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms