RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 KLF15Q9UIH9 416 aa8.37□□□□□ -1.07
PTP4A1P3-201ENST00000433661 RLBP1P12271 317 aa8.36□□□□□ -1.07
PTP4A1P3-201ENST00000433661 MAP3K10Q02779 954 aa8.36□□□□□ -1.07
PTP4A1P3-201ENST00000433661 MEI1Q5TIA1 1274 aa8.36□□□□□ -1.07
PTP4A1P3-201ENST00000433661 OXCT2Q9BYC2 517 aaPredicted RBP8.36□□□□□ -1.07
PTP4A1P3-201ENST00000433661 SRA1Q9HD15 236 aaKnown RBP8.36□□□□□ -1.07
PTP4A1P3-201ENST00000433661 NSUN5Q96P11 429 aaKnown RBP8.35□□□□□ -1.07
PTP4A1P3-201ENST00000433661 TINF2Q9BSI4 451 aa8.35□□□□□ -1.07
PTP4A1P3-201ENST00000433661 RBSNQ9H1K0 784 aa8.35□□□□□ -1.07
PTP4A1P3-201ENST00000433661 LRRC4BQ9NT99 713 aa8.35□□□□□ -1.07
PTP4A1P3-201ENST00000433661 SLC6A14Q9UN76 642 aa8.35□□□□□ -1.07
PTP4A1P3-201ENST00000433661 PDE2AO00408 941 aaPredicted RBP8.34□□□□□ -1.07
PTP4A1P3-201ENST00000433661 GRIA4P48058 902 aa8.34□□□□□ -1.07
PTP4A1P3-201ENST00000433661 PWP1Q13610 501 aa8.34□□□□□ -1.07
PTP4A1P3-201ENST00000433661 NAALADL2Q58DX5 795 aa8.34□□□□□ -1.07
PTP4A1P3-201ENST00000433661 SLCO4C1Q6ZQN7 724 aa8.34□□□□□ -1.07
PTP4A1P3-201ENST00000433661 ZNF654Q8IZM8 581 aa8.34□□□□□ -1.07
PTP4A1P3-201ENST00000433661 GMLQ99445 158 aa8.34□□□□□ -1.07
PTP4A1P3-201ENST00000433661 CEP44Q9C0F1 390 aa8.34□□□□□ -1.07
PTP4A1P3-201ENST00000433661 ADAM19Q9H013 955 aa8.34□□□□□ -1.07
PTP4A1P3-201ENST00000433661 KCNQ5Q9NR82 932 aa8.34□□□□□ -1.07
PTP4A1P3-201ENST00000433661 GHRHP01286 108 aa8.33□□□□□ -1.08
PTP4A1P3-201ENST00000433661 ACPPP15309 386 aa8.33□□□□□ -1.08
PTP4A1P3-201ENST00000433661 FCGRTP55899 365 aa8.33□□□□□ -1.08
PTP4A1P3-201ENST00000433661 DTHD1Q6ZMT9 781 aa8.33□□□□□ -1.08
PTP4A1P3-201ENST00000433661 GOLGA6L1Q8N7Z2 621 aa8.33□□□□□ -1.08
PTP4A1P3-201ENST00000433661 SREK1Q8WXA9 508 aaKnown RBP8.33□□□□□ -1.08
PTP4A1P3-201ENST00000433661 UBE2OQ9C0C9 1292 aaKnown RBP8.33□□□□□ -1.08
PTP4A1P3-201ENST00000433661 ZNF576Q9H609 170 aa8.33□□□□□ -1.08
PTP4A1P3-201ENST00000433661 GDF2Q9UK05 429 aaPredicted RBP8.33□□□□□ -1.08
PTP4A1P3-201ENST00000433661 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.33□□□□□ -1.08
PTP4A1P3-201ENST00000433661 ELOA3CA0A087WX78 387 aaPredicted RBP8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 A0A096LPE4 126 aa8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 A0A1W2PPZ6 126 aa8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 ELOA3DA6NLF2 546 aaPredicted RBP8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 ADH7P40394 386 aa8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 SRSF11Q05519 484 aaKnown RBP8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 SF3A1Q15459 793 aaKnown RBP8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 ELOA3BQ3SY89 546 aa8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 FCHSD1Q86WN1 690 aa8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 GPR161Q8N6U8 529 aaKnown RBP8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 ELOA3Q8NG57 546 aa8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 RASSF4Q9H2L5 321 aa8.32□□□□□ -1.08
PTP4A1P3-201ENST00000433661 IGSF3O75054 1194 aa8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 GJA8P48165 433 aa8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 PCBP4P57723 403 aaKnown RBP8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 RACK1P63244 317 aaKnown RBP8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 NFX1Q12986 1120 aaKnown RBP8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 C9orf131Q5VYM1 1079 aa8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 USP48Q86UV5 1035 aa8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 BSNDQ8WZ55 320 aa8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 POP1Q99575 1024 aaKnown RBP8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 LPIN3Q9BQK8 851 aa8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 CCSER2Q9H7U1 834 aa8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 GGT7Q9UJ14 662 aa8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 NAGPAQ9UK23 515 aa8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 SOX13Q9UN79 622 aa8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 TTF2Q9UNY4 1162 aaKnown RBP8.31□□□□□ -1.08
PTP4A1P3-201ENST00000433661 J3QW42 95 aa8.3□□□□□ -1.08
PTP4A1P3-201ENST00000433661 EIF4EBP3O60516 100 aaPredicted RBP8.3□□□□□ -1.08
PTP4A1P3-201ENST00000433661 RPS26P62854 115 aaKnown RBP8.3□□□□□ -1.08
PTP4A1P3-201ENST00000433661 SCARA3Q6AZY7 606 aa8.3□□□□□ -1.08
PTP4A1P3-201ENST00000433661 KANK3Q6NY19 840 aa8.3□□□□□ -1.08
PTP4A1P3-201ENST00000433661 FAM35AQ86V20 835 aa8.3□□□□□ -1.08
PTP4A1P3-201ENST00000433661 PLD4Q96BZ4 506 aa8.3□□□□□ -1.08
PTP4A1P3-201ENST00000433661 ARMC5Q96C12 935 aa8.3□□□□□ -1.08
PTP4A1P3-201ENST00000433661 NECAB3Q96P71 396 aaPredicted RBP8.3□□□□□ -1.08
PTP4A1P3-201ENST00000433661 TERTO14746 1132 aaKnown RBP8.29□□□□□ -1.08
PTP4A1P3-201ENST00000433661 EIF2AK2P19525 551 aaKnown RBP8.29□□□□□ -1.08
PTP4A1P3-201ENST00000433661 ATP11AP98196 1134 aa8.29□□□□□ -1.08
PTP4A1P3-201ENST00000433661 PERM1Q5SV97 790 aa8.29□□□□□ -1.08
PTP4A1P3-201ENST00000433661 RASGRP4Q8TDF6 673 aa8.29□□□□□ -1.08
PTP4A1P3-201ENST00000433661 DRC1Q96MC2 740 aa8.29□□□□□ -1.08
PTP4A1P3-201ENST00000433661 HHIPQ96QV1 700 aa8.29□□□□□ -1.08
PTP4A1P3-201ENST00000433661 CLEC4MQ9H2X3 399 aaPredicted RBP8.29□□□□□ -1.08
PTP4A1P3-201ENST00000433661 IGF1RP08069 1367 aa8.29□□□□□ -1.08
PTP4A1P3-201ENST00000433661 ENC1O14682 589 aa8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 B3GALT4O96024 378 aa8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 PTPRAP18433 802 aa8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 CCDC85BQ15834 202 aaPredicted RBP8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 SPRED3Q2MJR0 410 aa8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 ZNF394Q53GI3 561 aa8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 C20orf204Q6ZNR8 217 aa8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 RHOVQ96L33 236 aa8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 SPATA32Q96LK8 384 aa8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 TMEM74Q96NL1 305 aa8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 SOX17Q9H6I2 414 aaPredicted RBP8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 SEC31BQ9NQW1 1179 aa8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 PRDM6Q9NQX0 595 aa8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 GGA1Q9UJY5 639 aa8.28□□□□□ -1.08
PTP4A1P3-201ENST00000433661 EPXP11678 715 aa8.27□□□□□ -1.09
PTP4A1P3-201ENST00000433661 MLLT1Q03111 559 aaPredicted RBP8.27□□□□□ -1.09
PTP4A1P3-201ENST00000433661 GNL2Q13823 731 aaKnown RBP8.27□□□□□ -1.09
PTP4A1P3-201ENST00000433661 ILDR2Q71H61 639 aa8.27□□□□□ -1.09
PTP4A1P3-201ENST00000433661 VN1R5Q7Z5H4 357 aa8.27□□□□□ -1.09
PTP4A1P3-201ENST00000433661 CCDC84Q86UT8 332 aaPredicted RBP8.27□□□□□ -1.09
PTP4A1P3-201ENST00000433661 SLC16A10Q8TF71 515 aa8.27□□□□□ -1.09
PTP4A1P3-201ENST00000433661 COL25A1Q9BXS0 654 aaPredicted RBP8.27□□□□□ -1.09
PTP4A1P3-201ENST00000433661 ACBD3Q9H3P7 528 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms