RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 ZAP70P43403 619 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 ME3Q16798 604 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 UTP14CQ5TAP6 766 aaKnown RBP9.92□□□□□ -0.82
HDAC9-212ENST00000432645 TM6SF1Q9BZW5 370 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 SEC31BQ9NQW1 1179 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 EP400Q96L91 3159 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 SH3TC1Q8TE82 1336 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 BRD1O95696 1058 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 PSMA5P28066 241 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 ZNF592Q92610 1267 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 USP21Q9UK80 565 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 TPCN1Q9ULQ1 816 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 BCL9LQ86UU0 1499 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 WNK3Q9BYP7 1800 aa9.92□□□□□ -0.82
HDAC9-212ENST00000432645 A0A0G2JLW4 131 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 GOLGA6L3A6NEY3 463 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 CYP21A2P08686 494 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 WASHC4Q2M389 1173 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 BICDL1Q6ZP65 573 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 UTP14AQ9BVJ6 771 aaKnown RBP9.91□□□□□ -0.82
HDAC9-212ENST00000432645 VGLL3A8MV65 326 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 STK3Q13188 491 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 VPS72Q15906 364 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 LINC00116Q8NCU8 138 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 LRRC2Q9BYS8 371 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 LMBRD1Q9NUN5 540 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 SMC3Q9UQE7 1217 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 RPAP1Q9BWH6 1393 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-212ENST00000432645 RNF113AO15541 343 aaKnown RBP9.91□□□□□ -0.82
HDAC9-212ENST00000432645 SKOR2Q2VWA4 1001 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-212ENST00000432645 SMARCC1Q92922 1105 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-212ENST00000432645 OSBP2Q969R2 916 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 GDPD2Q9HCC8 539 aa9.91□□□□□ -0.82
HDAC9-212ENST00000432645 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-212ENST00000432645 MAST3O60307 1309 aa9.9□□□□□ -0.82
HDAC9-212ENST00000432645 RIC1Q4ADV7 1423 aa9.9□□□□□ -0.82
HDAC9-212ENST00000432645 M0R2C6 588 aa9.9□□□□□ -0.82
HDAC9-212ENST00000432645 PDE8BO95263 885 aa9.9□□□□□ -0.82
HDAC9-212ENST00000432645 RPS6KB1P23443 525 aa9.9□□□□□ -0.82
HDAC9-212ENST00000432645 ZMYM1Q5SVZ6 1142 aa9.9□□□□□ -0.82
HDAC9-212ENST00000432645 USPL1Q5W0Q7 1092 aa9.9□□□□□ -0.82
HDAC9-212ENST00000432645 MCAMP43121 646 aa9.9□□□□□ -0.83
HDAC9-212ENST00000432645 ST3GAL1Q11201 340 aa9.9□□□□□ -0.83
HDAC9-212ENST00000432645 MPHOSPH8Q99549 860 aa9.9□□□□□ -0.83
HDAC9-212ENST00000432645 HELLSQ9NRZ9 838 aa9.9□□□□□ -0.83
HDAC9-212ENST00000432645 HMG20BQ9P0W2 317 aa9.9□□□□□ -0.83
HDAC9-212ENST00000432645 U3KPZ7 1027 aaPredicted RBP9.9□□□□□ -0.83
HDAC9-212ENST00000432645 JCADQ9P266 1359 aa9.9□□□□□ -0.83
HDAC9-212ENST00000432645 HSPD1P10809 573 aaKnown RBP9.89□□□□□ -0.83
HDAC9-212ENST00000432645 SYT1P21579 422 aa9.89□□□□□ -0.83
HDAC9-212ENST00000432645 GJB2P29033 226 aa9.89□□□□□ -0.83
HDAC9-212ENST00000432645 TTLL5Q6EMB2 1281 aa9.89□□□□□ -0.83
HDAC9-212ENST00000432645 CAVIN1Q6NZI2 390 aaKnown RBP9.89□□□□□ -0.83
HDAC9-212ENST00000432645 VGLL2Q8N8G2 317 aa9.89□□□□□ -0.83
HDAC9-212ENST00000432645 NEK1Q96PY6 1258 aa9.89□□□□□ -0.83
HDAC9-212ENST00000432645 PLCD4Q9BRC7 762 aa9.89□□□□□ -0.83
HDAC9-212ENST00000432645 NUP98P52948 1817 aa9.89□□□□□ -0.83
HDAC9-212ENST00000432645 PTMSP20962 102 aa9.89□□□□□ -0.83
HDAC9-212ENST00000432645 CLCN1P35523 988 aa9.89□□□□□ -0.83
HDAC9-212ENST00000432645 PHKA1P46020 1223 aa9.89□□□□□ -0.83
HDAC9-212ENST00000432645 TOB2Q14106 344 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-212ENST00000432645 L1TD1Q5T7N2 865 aaKnown RBP9.89□□□□□ -0.83
HDAC9-212ENST00000432645 FAM43BQ6ZT52 329 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-212ENST00000432645 RFX7Q2KHR2 1363 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 FSD2A1L4K1 749 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 KLHL40Q2TBA0 621 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 MEX3CQ5U5Q3 659 aaKnown RBP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 STOX1Q6ZVD7 989 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 FNBP4Q8N3X1 1017 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 ZNF622Q969S3 477 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 ZSCAN31Q96LW9 406 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 PUS7LQ9H0K6 701 aaKnown RBP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 WDR33Q9C0J8 1336 aaKnown RBP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 STX6O43752 255 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 IDH1O75874 414 aaKnown RBP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 NTSR2O95665 410 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 CCDC102BQ68D86 513 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 GAS2L3Q86XJ1 694 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 ANP32BQ92688 251 aaKnown RBP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 SH2B1Q9NRF2 756 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 NSFL1CQ9UNZ2 370 aaKnown RBP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 MYH14Q7Z406 1995 aaKnown RBP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 HAND2P61296 217 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 TSGA10IPQ3SY00 556 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 PARP10Q53GL7 1025 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 Q6ZUG5 572 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 CHST3Q7LGC8 479 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 CCDC24Q8N4L8 307 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 GPT2Q8TD30 523 aa9.88□□□□□ -0.83
HDAC9-212ENST00000432645 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
HDAC9-212ENST00000432645 KRT32Q14532 448 aa9.87□□□□□ -0.83
HDAC9-212ENST00000432645 PPP4R3BQ5MIZ7 849 aa9.87□□□□□ -0.83
HDAC9-212ENST00000432645 ZNF652Q9Y2D9 606 aa9.87□□□□□ -0.83
HDAC9-212ENST00000432645 NWD2Q9ULI1 1742 aa9.87□□□□□ -0.83
HDAC9-212ENST00000432645 VPS37CA5D8V6 355 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-212ENST00000432645 TPM2P07951 284 aa9.87□□□□□ -0.83
HDAC9-212ENST00000432645 PUM3Q15397 648 aaKnown RBP9.87□□□□□ -0.83
HDAC9-212ENST00000432645 ERFEQ4G0M1 354 aa9.87□□□□□ -0.83
HDAC9-212ENST00000432645 CCDC152Q4G0S7 254 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms