RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 MMP14P50281 582 aa19.08■□□□□ 0.64
PRKDC-203ENST00000432581 CWF19L2Q2TBE0 894 aaKnown RBP19.08■□□□□ 0.64
PRKDC-203ENST00000432581 RASAL3Q86YV0 1011 aa19.08■□□□□ 0.64
PRKDC-203ENST00000432581 OGFOD1Q8N543 542 aa19.08■□□□□ 0.64
PRKDC-203ENST00000432581 COA1Q9GZY4 146 aa19.08■□□□□ 0.64
PRKDC-203ENST00000432581 POLR2AP24928 1970 aaKnown RBP19.07■□□□□ 0.64
PRKDC-203ENST00000432581 H7C1W4 665 aa19.07■□□□□ 0.64
PRKDC-203ENST00000432581 IGHMBP2P38935 993 aaKnown RBP19.07■□□□□ 0.64
PRKDC-203ENST00000432581 TWISTNBQ3B726 338 aaPredicted RBP19.07■□□□□ 0.64
PRKDC-203ENST00000432581 DACT2Q5SW24 774 aa19.07■□□□□ 0.64
PRKDC-203ENST00000432581 STRIP1Q5VSL9 837 aa19.07■□□□□ 0.64
PRKDC-203ENST00000432581 UBE3BQ7Z3V4 1068 aa19.07■□□□□ 0.64
PRKDC-203ENST00000432581 LEMD3Q9Y2U8 911 aa19.07■□□□□ 0.64
PRKDC-203ENST00000432581 WTIPA6NIX2 430 aaPredicted RBP19.06■□□□□ 0.64
PRKDC-203ENST00000432581 SLC4A2P04920 1241 aa19.06■□□□□ 0.64
PRKDC-203ENST00000432581 WWC1Q8IX03 1113 aa19.06■□□□□ 0.64
PRKDC-203ENST00000432581 PLA2G12BQ9BX93 195 aa19.06■□□□□ 0.64
PRKDC-203ENST00000432581 IL16Q14005 1332 aa19.05■□□□□ 0.64
PRKDC-203ENST00000432581 NBPF9Q3BBW0 867 aa19.05■□□□□ 0.64
PRKDC-203ENST00000432581 FBXW7Q969H0 707 aa19.05■□□□□ 0.64
PRKDC-203ENST00000432581 ANKRD2Q9GZV1 360 aa19.05■□□□□ 0.64
PRKDC-203ENST00000432581 PAPPA2Q9BXP8 1791 aa19.05■□□□□ 0.64
PRKDC-203ENST00000432581 PSME4Q14997 1843 aa19.04■□□□□ 0.64
PRKDC-203ENST00000432581 ITGA6P23229 1130 aa19.04■□□□□ 0.64
PRKDC-203ENST00000432581 GCKRQ14397 625 aa19.04■□□□□ 0.64
PRKDC-203ENST00000432581 G2E3Q7L622 706 aa19.04■□□□□ 0.64
PRKDC-203ENST00000432581 MPHOSPH8Q99549 860 aa19.04■□□□□ 0.64
PRKDC-203ENST00000432581 MYH16Q9H6N6 1097 aa19.04■□□□□ 0.64
PRKDC-203ENST00000432581 ZNF804BA4D1E1 1349 aa19.03■□□□□ 0.64
PRKDC-203ENST00000432581 WNT10BO00744 389 aa19.03■□□□□ 0.64
PRKDC-203ENST00000432581 NF2P35240 595 aa19.03■□□□□ 0.64
PRKDC-203ENST00000432581 FLIIQ13045 1269 aa19.03■□□□□ 0.64
PRKDC-203ENST00000432581 NCBP3Q53F19 620 aaKnown RBP19.03■□□□□ 0.64
PRKDC-203ENST00000432581 MXD3Q9BW11 206 aa19.03■□□□□ 0.64
PRKDC-203ENST00000432581 CTU1Q7Z7A3 348 aaKnown RBP19.02■□□□□ 0.64
PRKDC-203ENST00000432581 TXNRD3Q86VQ6 643 aa19.02■□□□□ 0.64
PRKDC-203ENST00000432581 HDAC9Q9UKV0 1011 aa19.02■□□□□ 0.64
PRKDC-203ENST00000432581 UBE2Q2LH0YL09 131 aa19.01■□□□□ 0.63
PRKDC-203ENST00000432581 CSF1RP07333 972 aa19.01■□□□□ 0.63
PRKDC-203ENST00000432581 FKBP5Q13451 457 aaPredicted RBP19.01■□□□□ 0.63
PRKDC-203ENST00000432581 TTLL12Q14166 644 aaPredicted RBP19.01■□□□□ 0.63
PRKDC-203ENST00000432581 TTLL5Q6EMB2 1281 aa19.01■□□□□ 0.63
PRKDC-203ENST00000432581 MOB2Q70IA6 237 aa19.01■□□□□ 0.63
PRKDC-203ENST00000432581 LINS1Q8NG48 757 aa19.01■□□□□ 0.63
PRKDC-203ENST00000432581 DNAAF4Q8WXU2 420 aa19.01■□□□□ 0.63
PRKDC-203ENST00000432581 SCAF8Q9UPN6 1271 aaKnown RBP19.01■□□□□ 0.63
PRKDC-203ENST00000432581 KCNJ4P48050 445 aa19■□□□□ 0.63
PRKDC-203ENST00000432581 CASP7P55210 303 aa19■□□□□ 0.63
PRKDC-203ENST00000432581 PRAMEF18Q5VWM3 479 aa19■□□□□ 0.63
PRKDC-203ENST00000432581 APOBEC3FQ8IUX4 373 aaKnown RBP19■□□□□ 0.63
PRKDC-203ENST00000432581 SASH1O94885 1247 aa18.99■□□□□ 0.63
PRKDC-203ENST00000432581 SLC34A2O95436 690 aa18.99■□□□□ 0.63
PRKDC-203ENST00000432581 CCDC184Q52MB2 194 aa18.99■□□□□ 0.63
PRKDC-203ENST00000432581 MYH3P11055 1940 aa18.98■□□□□ 0.63
PRKDC-203ENST00000432581 ANKRD18BA2A2Z9 1011 aa18.98■□□□□ 0.63
PRKDC-203ENST00000432581 KLRK1P26718 216 aa18.98■□□□□ 0.63
PRKDC-203ENST00000432581 CHRNDQ07001 517 aa18.98■□□□□ 0.63
PRKDC-203ENST00000432581 ARMC9Q7Z3E5 817 aa18.98■□□□□ 0.63
PRKDC-203ENST00000432581 KIAA0825Q8IV33 1275 aa18.98■□□□□ 0.63
PRKDC-203ENST00000432581 TM4SF4P48230 202 aa18.97■□□□□ 0.63
PRKDC-203ENST00000432581 GTF2IP78347 998 aa18.97■□□□□ 0.63
PRKDC-203ENST00000432581 PKN2Q16513 984 aaKnown RBP18.97■□□□□ 0.63
PRKDC-203ENST00000432581 ZBED3Q96IU2 234 aaPredicted RBP18.97■□□□□ 0.63
PRKDC-203ENST00000432581 AKAP11Q9UKA4 1901 aa18.97■□□□□ 0.63
PRKDC-203ENST00000432581 FANCIQ9NVI1 1328 aa18.97■□□□□ 0.63
PRKDC-203ENST00000432581 SREBF2Q12772 1141 aa18.96■□□□□ 0.63
PRKDC-203ENST00000432581 NOM1Q5C9Z4 860 aaKnown RBP18.96■□□□□ 0.63
PRKDC-203ENST00000432581 CD209Q9NNX6 404 aa18.96■□□□□ 0.63
PRKDC-203ENST00000432581 TBC1D8O95759 1140 aa18.95■□□□□ 0.62
PRKDC-203ENST00000432581 IFIT5Q13325 482 aaKnown RBP18.95■□□□□ 0.62
PRKDC-203ENST00000432581 C15orf52Q6ZUT6 534 aaKnown RBP18.95■□□□□ 0.62
PRKDC-203ENST00000432581 WDR63Q8IWG1 891 aa18.95■□□□□ 0.62
PRKDC-203ENST00000432581 ZNF296Q8WUU4 475 aaPredicted RBP18.95■□□□□ 0.62
PRKDC-203ENST00000432581 COL1A1P02452 1464 aaPredicted RBP18.95■□□□□ 0.62
PRKDC-203ENST00000432581 VAMP4O75379 141 aa18.94■□□□□ 0.62
PRKDC-203ENST00000432581 SOX10P56693 466 aa18.94■□□□□ 0.62
PRKDC-203ENST00000432581 PTPN12Q05209 780 aaKnown RBP18.94■□□□□ 0.62
PRKDC-203ENST00000432581 DLGAP5Q15398 846 aa18.94■□□□□ 0.62
PRKDC-203ENST00000432581 SPEF2Q9C093 1822 aa18.94■□□□□ 0.62
PRKDC-203ENST00000432581 LDLRAD1Q5T700 205 aa18.93■□□□□ 0.62
PRKDC-203ENST00000432581 ZNF804AQ7Z570 1209 aa18.93■□□□□ 0.62
PRKDC-203ENST00000432581 MTMR14Q8NCE2 650 aa18.93■□□□□ 0.62
PRKDC-203ENST00000432581 DEFB129Q9H1M3 183 aa18.93■□□□□ 0.62
PRKDC-203ENST00000432581 HPS5Q9UPZ3 1129 aa18.93■□□□□ 0.62
PRKDC-203ENST00000432581 IRS2Q9Y4H2 1338 aa18.93■□□□□ 0.62
PRKDC-203ENST00000432581 ZNF646O15015 1829 aaPredicted RBP18.93■□□□□ 0.62
PRKDC-203ENST00000432581 FOXO4P98177 505 aa18.92■□□□□ 0.62
PRKDC-203ENST00000432581 MKRN3Q13064 507 aaKnown RBP18.92■□□□□ 0.62
PRKDC-203ENST00000432581 PRKG1Q13976 671 aa18.92■□□□□ 0.62
PRKDC-203ENST00000432581 CFHR5Q9BXR6 569 aa18.92■□□□□ 0.62
PRKDC-203ENST00000432581 MRS2Q9HD23 443 aa18.92■□□□□ 0.62
PRKDC-203ENST00000432581 CHMP3Q9Y3E7 222 aa18.92■□□□□ 0.62
PRKDC-203ENST00000432581 PPP2R3BQ9Y5P8 575 aa18.92■□□□□ 0.62
PRKDC-203ENST00000432581 GPR25O00155 361 aa18.91■□□□□ 0.62
PRKDC-203ENST00000432581 TAF5LO75529 589 aa18.91■□□□□ 0.62
PRKDC-203ENST00000432581 IL1R1P14778 569 aa18.91■□□□□ 0.62
PRKDC-203ENST00000432581 FKBP1AP62942 108 aaKnown RBP18.91■□□□□ 0.62
PRKDC-203ENST00000432581 BEND3Q5T5X7 828 aa18.91■□□□□ 0.62
PRKDC-203ENST00000432581 CERS5Q8N5B7 392 aa18.91■□□□□ 0.62
PRKDC-203ENST00000432581 HELBQ8NG08 1087 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms