RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 KCNQ4P56696 695 aa17.43■□□□□ 0.38
RFTN1-203ENST00000432519 KRT32Q14532 448 aa17.43■□□□□ 0.38
RFTN1-203ENST00000432519 ANKRD1Q15327 319 aa17.43■□□□□ 0.38
RFTN1-203ENST00000432519 DSCC1Q9BVC3 393 aa17.43■□□□□ 0.38
RFTN1-203ENST00000432519 AKAP2Q9Y2D5 859 aa17.43■□□□□ 0.38
RFTN1-203ENST00000432519 GPHNQ9NQX3 736 aaPredicted RBP17.43■□□□□ 0.38
RFTN1-203ENST00000432519 MYH3P11055 1940 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 AKAP11Q9UKA4 1901 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 ANKRD18BA2A2Z9 1011 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 E7EWF7 191 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 HAND2P61296 217 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 WASHC4Q2M389 1173 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 SMIM5Q71RC9 77 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 NRAPQ86VF7 1730 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 GTF3C6Q969F1 213 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 FBXO3Q9UK99 471 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 MYO5AQ9Y4I1 1855 aaKnown RBP17.42■□□□□ 0.38
RFTN1-203ENST00000432519 LOC102724428A0A0B4J2F2 783 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 SIK1P57059 783 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 SCRN1Q12765 414 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.42■□□□□ 0.38
RFTN1-203ENST00000432519 DDX11Q96FC9 970 aa17.42■□□□□ 0.38
RFTN1-203ENST00000432519 ERVV-1B6SEH8 477 aa17.41■□□□□ 0.38
RFTN1-203ENST00000432519 APOBRQ0VD83 1088 aa17.41■□□□□ 0.38
RFTN1-203ENST00000432519 SEC31BQ9NQW1 1179 aa17.41■□□□□ 0.38
RFTN1-203ENST00000432519 NWD2Q9ULI1 1742 aa17.41■□□□□ 0.38
RFTN1-203ENST00000432519 PDE8AO60658 829 aa17.41■□□□□ 0.38
RFTN1-203ENST00000432519 PHLPP1O60346 1717 aa17.4■□□□□ 0.38
RFTN1-203ENST00000432519 HSP90B1P14625 803 aaKnown RBP17.4■□□□□ 0.38
RFTN1-203ENST00000432519 PHKA1P46020 1223 aa17.4■□□□□ 0.38
RFTN1-203ENST00000432519 PTF1AQ7RTS3 328 aa17.4■□□□□ 0.38
RFTN1-203ENST00000432519 NKX2-3Q8TAU0 364 aa17.4■□□□□ 0.38
RFTN1-203ENST00000432519 CCDC87Q9NVE4 849 aa17.4■□□□□ 0.38
RFTN1-203ENST00000432519 SPATA31A5Q5VU36 1347 aa17.4■□□□□ 0.38
RFTN1-203ENST00000432519 SPATA31A7Q8IWB4 1347 aa17.4■□□□□ 0.38
RFTN1-203ENST00000432519 EXOSC10Q01780 885 aaKnown RBP17.4■□□□□ 0.38
RFTN1-203ENST00000432519 DHX32Q7L7V1 743 aaKnown RBP17.4■□□□□ 0.38
RFTN1-203ENST00000432519 PDE8BO95263 885 aa17.39■□□□□ 0.37
RFTN1-203ENST00000432519 TTC6Q86TZ1 520 aa17.39■□□□□ 0.37
RFTN1-203ENST00000432519 NCOA5Q9HCD5 579 aaKnown RBP17.39■□□□□ 0.37
RFTN1-203ENST00000432519 DENND2AQ9ULE3 1009 aa17.39■□□□□ 0.37
RFTN1-203ENST00000432519 CTDNEP1O95476 244 aa17.39■□□□□ 0.37
RFTN1-203ENST00000432519 FGAP02671 866 aa17.39■□□□□ 0.37
RFTN1-203ENST00000432519 CCT2P78371 535 aaKnown RBP17.39■□□□□ 0.37
RFTN1-203ENST00000432519 PPP1R9BQ96SB3 815 aa17.39■□□□□ 0.37
RFTN1-203ENST00000432519 PIH1D3Q9NQM4 214 aaKnown RBP17.39■□□□□ 0.37
RFTN1-203ENST00000432519 SPEF2Q9C093 1822 aa17.39■□□□□ 0.37
RFTN1-203ENST00000432519 CAMTA2O94983 1202 aa17.38■□□□□ 0.37
RFTN1-203ENST00000432519 TFIP11Q9UBB9 837 aaKnown RBP17.38■□□□□ 0.37
RFTN1-203ENST00000432519 COL4A1P02462 1669 aa17.38■□□□□ 0.37
RFTN1-203ENST00000432519 FOSBP53539 338 aa17.38■□□□□ 0.37
RFTN1-203ENST00000432519 UBE2HP62256 183 aa17.38■□□□□ 0.37
RFTN1-203ENST00000432519 FGD1P98174 961 aa17.38■□□□□ 0.37
RFTN1-203ENST00000432519 CCDC102BQ68D86 513 aa17.37■□□□□ 0.37
RFTN1-203ENST00000432519 ATP6V1DQ9Y5K8 247 aa17.37■□□□□ 0.37
RFTN1-203ENST00000432519 EP400Q96L91 3159 aa17.36■□□□□ 0.37
RFTN1-203ENST00000432519 GPAA1O43292 621 aa17.36■□□□□ 0.37
RFTN1-203ENST00000432519 FAM98CQ17RN3 349 aaKnown RBP17.36■□□□□ 0.37
RFTN1-203ENST00000432519 THRAP3Q9Y2W1 955 aaKnown RBP17.36■□□□□ 0.37
RFTN1-203ENST00000432519 WTIPA6NIX2 430 aaPredicted RBP17.36■□□□□ 0.37
RFTN1-203ENST00000432519 CCDC173Q0VFZ6 552 aa17.36■□□□□ 0.37
RFTN1-203ENST00000432519 APPBP2Q92624 585 aa17.36■□□□□ 0.37
RFTN1-203ENST00000432519 AGXT2Q9BYV1 514 aa17.36■□□□□ 0.37
RFTN1-203ENST00000432519 SLC9C2Q5TAH2 1124 aa17.35■□□□□ 0.37
RFTN1-203ENST00000432519 NSUN7Q8NE18 718 aaKnown RBP17.35■□□□□ 0.37
RFTN1-203ENST00000432519 CDCA7Q9BWT1 371 aaPredicted RBP17.35■□□□□ 0.37
RFTN1-203ENST00000432519 WWC3Q9ULE0 1092 aa17.35■□□□□ 0.37
RFTN1-203ENST00000432519 NAP1L2Q9ULW6 460 aaPredicted RBP17.35■□□□□ 0.37
RFTN1-203ENST00000432519 PFKFB2O60825 505 aa17.35■□□□□ 0.37
RFTN1-203ENST00000432519 IDH1O75874 414 aaKnown RBP17.35■□□□□ 0.37
RFTN1-203ENST00000432519 FGFR2P21802 821 aa17.34■□□□□ 0.37
RFTN1-203ENST00000432519 RAB11FIP4Q86YS3 637 aa17.34■□□□□ 0.37
RFTN1-203ENST00000432519 NBPF3Q9H094 633 aa17.34■□□□□ 0.37
RFTN1-203ENST00000432519 NIP7Q9Y221 180 aaKnown RBP eCLIP17.34■□□□□ 0.37
RFTN1-203ENST00000432519 MYH7P12883 1935 aa17.34■□□□□ 0.37
RFTN1-203ENST00000432519 ESPNB1AK53 854 aa17.34■□□□□ 0.37
RFTN1-203ENST00000432519 PDCP20941 246 aa17.34■□□□□ 0.37
RFTN1-203ENST00000432519 ADD2P35612 726 aa17.34■□□□□ 0.37
RFTN1-203ENST00000432519 GIMAP6Q6P9H5 292 aa17.34■□□□□ 0.37
RFTN1-203ENST00000432519 TRIM44Q96DX7 344 aaPredicted RBP17.34■□□□□ 0.37
RFTN1-203ENST00000432519 TSPY26PQ9H489 355 aa17.34■□□□□ 0.37
RFTN1-203ENST00000432519 PDIA3P30101 505 aaKnown RBP17.34■□□□□ 0.37
RFTN1-203ENST00000432519 SMARCC2Q8TAQ2 1214 aa17.34■□□□□ 0.37
RFTN1-203ENST00000432519 UTP14AQ9BVJ6 771 aaKnown RBP17.34■□□□□ 0.37
RFTN1-203ENST00000432519 NTSR2O95665 410 aa17.33■□□□□ 0.36
RFTN1-203ENST00000432519 ZFYP08048 801 aaPredicted RBP17.33■□□□□ 0.36
RFTN1-203ENST00000432519 HMGB1P09429 215 aaKnown RBP17.33■□□□□ 0.36
RFTN1-203ENST00000432519 CCDC183Q5T5S1 534 aa17.33■□□□□ 0.36
RFTN1-203ENST00000432519 C3orf67Q6ZVT6 689 aa17.33■□□□□ 0.36
RFTN1-203ENST00000432519 SYAP1Q96A49 352 aaPredicted RBP17.33■□□□□ 0.36
RFTN1-203ENST00000432519 LIG1P18858 919 aa17.33■□□□□ 0.36
RFTN1-203ENST00000432519 ANTXR2P58335 489 aa17.33■□□□□ 0.36
RFTN1-203ENST00000432519 PDLIM2Q96JY6 352 aa17.33■□□□□ 0.36
RFTN1-203ENST00000432519 PTPDC1A2A3K4 754 aa17.32■□□□□ 0.36
RFTN1-203ENST00000432519 KRT85P78386 507 aa17.32■□□□□ 0.36
RFTN1-203ENST00000432519 PUM3Q15397 648 aaKnown RBP17.32■□□□□ 0.36
RFTN1-203ENST00000432519 FAM182BQ5T319 152 aa17.32■□□□□ 0.36
RFTN1-203ENST00000432519 TICAM2Q86XR7 235 aa17.32■□□□□ 0.36
RFTN1-203ENST00000432519 FTOQ9C0B1 505 aaKnown RBP eCLIP17.32■□□□□ 0.36
RFTN1-203ENST00000432519 LRP5O75197 1615 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms