RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 TATDN2Q93075 761 aa7.8□□□□□ -1.16
NIPAL3-205ENST00000432012 CEP126Q9P2H0 1117 aa7.8□□□□□ -1.16
NIPAL3-205ENST00000432012 TRPM1Q7Z4N2 1603 aa7.79□□□□□ -1.16
NIPAL3-205ENST00000432012 SLC27A3Q5K4L6 730 aa7.79□□□□□ -1.16
NIPAL3-205ENST00000432012 RNF135Q8IUD6 432 aa7.79□□□□□ -1.16
NIPAL3-205ENST00000432012 OCSTAMPQ9BR26 566 aa7.79□□□□□ -1.16
NIPAL3-205ENST00000432012 TMX4Q9H1E5 349 aaPredicted RBP7.79□□□□□ -1.16
NIPAL3-205ENST00000432012 MYBBP1AQ9BQG0 1328 aaKnown RBP7.79□□□□□ -1.16
NIPAL3-205ENST00000432012 PLEKHG2Q9H7P9 1386 aa7.79□□□□□ -1.16
NIPAL3-205ENST00000432012 FKBP5Q13451 457 aaPredicted RBP7.79□□□□□ -1.16
NIPAL3-205ENST00000432012 GPR153Q6NV75 609 aa7.79□□□□□ -1.16
NIPAL3-205ENST00000432012 ZSCAN29Q8IWY8 852 aaPredicted RBP7.79□□□□□ -1.16
NIPAL3-205ENST00000432012 CCSER2Q9H7U1 834 aa7.79□□□□□ -1.16
NIPAL3-205ENST00000432012 ZBTB7BO15156 539 aaPredicted RBP7.78□□□□□ -1.16
NIPAL3-205ENST00000432012 CHRNA2Q15822 529 aa7.78□□□□□ -1.16
NIPAL3-205ENST00000432012 PROX2Q3B8N5 592 aa7.78□□□□□ -1.16
NIPAL3-205ENST00000432012 C1orf216Q8TAB5 229 aa7.78□□□□□ -1.16
NIPAL3-205ENST00000432012 CUEDC1Q9NWM3 386 aaPredicted RBP7.78□□□□□ -1.16
NIPAL3-205ENST00000432012 YTHDC2Q9H6S0 1430 aaKnown RBP7.78□□□□□ -1.16
NIPAL3-205ENST00000432012 C11orf96Q7Z7L8 435 aa7.78□□□□□ -1.16
NIPAL3-205ENST00000432012 FMNL3Q8IVF7 1028 aa7.78□□□□□ -1.16
NIPAL3-205ENST00000432012 PNMA1Q8ND90 353 aa7.78□□□□□ -1.16
NIPAL3-205ENST00000432012 EXOC6Q8TAG9 804 aa7.78□□□□□ -1.16
NIPAL3-205ENST00000432012 EGFL7Q9UHF1 273 aa7.78□□□□□ -1.16
NIPAL3-205ENST00000432012 COL5A2P05997 1499 aaPredicted RBP7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 RACK1P63244 317 aaKnown RBP7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 CBLBQ13191 982 aa7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 PHTF2Q8N3S3 785 aa7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 SMC1BQ8NDV3 1235 aa7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 CARD11Q9BXL7 1154 aa7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 STK26Q9P289 416 aa7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 RCAN3Q9UKA8 241 aa7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 COL4A3BPQ9Y5P4 624 aa7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 PLEKHH1Q9ULM0 1364 aa7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 ITSN1Q15811 1721 aa7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 TBX4P57082 545 aa7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 FKBP4Q02790 459 aaKnown RBP eCLIP7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 DNAAF2Q9NVR5 837 aaKnown RBP7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 LHX6Q9UPM6 363 aa7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 EMILIN1Q9Y6C2 1016 aa7.77□□□□□ -1.17
NIPAL3-205ENST00000432012 CCDC189A1A4V9 331 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 PLEKHG6Q3KR16 790 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 TPCN2Q8NHX9 752 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 IRF2BPLQ9H1B7 796 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 LZTS3O60299 673 aaPredicted RBP7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 USP46P62068 366 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 LONRF3Q496Y0 759 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 TRAF7Q6Q0C0 670 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 FILIP1Q7Z7B0 1213 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 SMC5Q8IY18 1101 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 TSR2Q969E8 191 aaKnown RBP7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 IFT57Q9NWB7 429 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 KDM2BQ8NHM5 1336 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 PXDNLA1KZ92 1463 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 PIK3C2AO00443 1686 aa7.76□□□□□ -1.17
NIPAL3-205ENST00000432012 PUS10Q3MIT2 529 aaKnown RBP7.75□□□□□ -1.17
NIPAL3-205ENST00000432012 MARCH10Q8NA82 808 aaPredicted RBP7.75□□□□□ -1.17
NIPAL3-205ENST00000432012 TSEN2Q8NCE0 465 aaKnown RBP7.75□□□□□ -1.17
NIPAL3-205ENST00000432012 NGDNQ8NEJ9 315 aaKnown RBP7.75□□□□□ -1.17
NIPAL3-205ENST00000432012 PNPLA7Q6ZV29 1317 aa7.75□□□□□ -1.17
NIPAL3-205ENST00000432012 CTCFP49711 727 aaPredicted RBP7.75□□□□□ -1.17
NIPAL3-205ENST00000432012 ZNF827Q17R98 1081 aa7.75□□□□□ -1.17
NIPAL3-205ENST00000432012 SECISBP2LQ93073 1101 aaKnown RBP7.75□□□□□ -1.17
NIPAL3-205ENST00000432012 METTL14Q9HCE5 456 aaKnown RBP7.75□□□□□ -1.17
NIPAL3-205ENST00000432012 FKBPLQ9UIM3 349 aa7.75□□□□□ -1.17
NIPAL3-205ENST00000432012 TNRC6CQ9HCJ0 1690 aaKnown RBP7.75□□□□□ -1.17
NIPAL3-205ENST00000432012 ST20-MTHFSA0A0A6YYL1 179 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 LDHBP07195 334 aaKnown RBP7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 NEFMP07197 916 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 RNF34Q969K3 372 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 AIDAQ96BJ3 306 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 HINFPQ9BQA5 517 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 TGIF2Q9GZN2 237 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 CCDC87Q9NVE4 849 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 TREHO43280 583 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 LMOD3Q0VAK6 560 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 TSHZ1Q6ZSZ6 1077 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 NLRP13Q86W25 1043 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 PCDH12Q9NPG4 1184 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 VTI1BQ9UEU0 232 aa7.74□□□□□ -1.17
NIPAL3-205ENST00000432012 EXOC5O00471 708 aa7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 MPSTP25325 297 aa7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 CCDC102BQ68D86 513 aa7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 FLAD1Q8NFF5 587 aa7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 JDP2Q8WYK2 163 aa7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 TFCP2L1Q9NZI6 479 aa7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 SORBS3O60504 671 aa7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 ZNF76P36508 570 aa7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 RHBDL3P58872 404 aa7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 MCCD1P59942 119 aaPredicted RBP7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 ABHD8Q96I13 439 aa7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 RPS6KC1Q96S38 1066 aa7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.73□□□□□ -1.17
NIPAL3-205ENST00000432012 ENOX2Q16206 610 aaKnown RBP7.72□□□□□ -1.17
NIPAL3-205ENST00000432012 OXLD1Q5BKU9 147 aa7.72□□□□□ -1.17
NIPAL3-205ENST00000432012 ZNF746Q6NUN9 644 aaPredicted RBP7.72□□□□□ -1.17
NIPAL3-205ENST00000432012 PTF1AQ7RTS3 328 aa7.72□□□□□ -1.17
NIPAL3-205ENST00000432012 BTAF1O14981 1849 aa7.72□□□□□ -1.17
NIPAL3-205ENST00000432012 WDHD1O75717 1129 aaPredicted RBP7.72□□□□□ -1.17
NIPAL3-205ENST00000432012 IGHA2P01877 340 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms