RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 CXCL9Q07325 125 aa5.61□□□□□ -1.51
UBE4A-202ENST00000431736 LINS1Q8NG48 757 aa5.61□□□□□ -1.51
UBE4A-202ENST00000431736 TSPYL2Q9H2G4 693 aaPredicted RBP5.61□□□□□ -1.51
UBE4A-202ENST00000431736 DENND2AQ9ULE3 1009 aa5.61□□□□□ -1.51
UBE4A-202ENST00000431736 THSD7AQ9UPZ6 1657 aa5.61□□□□□ -1.51
UBE4A-202ENST00000431736 C10orf71Q711Q0 1435 aa5.61□□□□□ -1.51
UBE4A-202ENST00000431736 SNAPC2Q13487 334 aa5.61□□□□□ -1.51
UBE4A-202ENST00000431736 ZSCAN25Q6NSZ9 544 aa5.61□□□□□ -1.51
UBE4A-202ENST00000431736 CERS3Q8IU89 383 aa5.61□□□□□ -1.51
UBE4A-202ENST00000431736 ZNF341Q9BYN7 854 aa5.61□□□□□ -1.51
UBE4A-202ENST00000431736 MTIF3Q9H2K0 278 aaKnown RBP5.61□□□□□ -1.51
UBE4A-202ENST00000431736 TSKSQ9UJT2 592 aa5.61□□□□□ -1.51
UBE4A-202ENST00000431736 APPP05067 770 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 UQCRFS1P1P0C7P4 283 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 FCGRTP55899 365 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 FLIIQ13045 1269 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 CLRN2A0PK11 232 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 KCNQ3O43525 872 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 FASTKD5Q7L8L6 764 aaKnown RBP5.6□□□□□ -1.51
UBE4A-202ENST00000431736 HELBQ8NG08 1087 aaPredicted RBP5.6□□□□□ -1.51
UBE4A-202ENST00000431736 PHACTR3Q96KR7 559 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 ABCC4O15439 1325 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 DHX16O60231 1041 aaKnown RBP5.6□□□□□ -1.51
UBE4A-202ENST00000431736 TFRCP02786 760 aaKnown RBP5.6□□□□□ -1.51
UBE4A-202ENST00000431736 BRPF1P55201 1214 aaPredicted RBP5.6□□□□□ -1.51
UBE4A-202ENST00000431736 HTRA3P83110 453 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 BRDTQ58F21 947 aaPredicted RBP5.6□□□□□ -1.51
UBE4A-202ENST00000431736 PPP4R3BQ5MIZ7 849 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 MYOZ2Q9NPC6 264 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 SAMD7Q7Z3H4 446 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 SPINK5Q9NQ38 1064 aaPredicted RBP5.6□□□□□ -1.51
UBE4A-202ENST00000431736 NFAT5O94916 1531 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 CENPBP07199 599 aaPredicted RBP5.6□□□□□ -1.51
UBE4A-202ENST00000431736 PICALMQ13492 652 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 HLFQ16534 295 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 WDR63Q8IWG1 891 aa5.6□□□□□ -1.51
UBE4A-202ENST00000431736 PXDNLA1KZ92 1463 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 UBE2Q2LH0YL09 131 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 CNGA1P29973 690 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 CFAP100Q494V2 611 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 SIL1Q9H173 461 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 MROH5Q6ZUA9 1318 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 CCL15-CCL14A0A0B4J2E2 113 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 TNPO2O14787 897 aaKnown RBP5.59□□□□□ -1.51
UBE4A-202ENST00000431736 CCL15Q16663 113 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 STRIP1Q5VSL9 837 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 YTHDC1Q96MU7 727 aaKnown RBP5.59□□□□□ -1.51
UBE4A-202ENST00000431736 SGIP1Q9BQI5 828 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 RTN4Q9NQC3 1192 aaKnown RBP5.59□□□□□ -1.51
UBE4A-202ENST00000431736 ADAMTS8Q9UP79 889 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 LMBR1LQ6UX01 489 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 CDCA5Q96FF9 252 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 LRRC37A3O60309 1634 aa5.59□□□□□ -1.51
UBE4A-202ENST00000431736 TRPM3Q9HCF6 1732 aaPredicted RBP5.59□□□□□ -1.51
UBE4A-202ENST00000431736 SASH1O94885 1247 aa5.59□□□□□ -1.52
UBE4A-202ENST00000431736 PRMT2P55345 433 aa5.59□□□□□ -1.52
UBE4A-202ENST00000431736 SOX10P56693 466 aa5.59□□□□□ -1.52
UBE4A-202ENST00000431736 MAP3K12Q12852 859 aa5.59□□□□□ -1.52
UBE4A-202ENST00000431736 L3MBTL3Q96JM7 780 aaPredicted RBP5.59□□□□□ -1.52
UBE4A-202ENST00000431736 TLL2Q9Y6L7 1015 aa5.59□□□□□ -1.52
UBE4A-202ENST00000431736 JARID2Q92833 1246 aaPredicted RBP5.58□□□□□ -1.52
UBE4A-202ENST00000431736 MAP3K9P80192 1104 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 ATP2B3Q16720 1220 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 NACAP1Q9BZK3 213 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 BSDC1Q9NW68 430 aaPredicted RBP5.58□□□□□ -1.52
UBE4A-202ENST00000431736 BRWD3Q6RI45 1802 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 IBTKQ9P2D0 1353 aaPredicted RBP5.58□□□□□ -1.52
UBE4A-202ENST00000431736 NFKBIEO00221 500 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 GRM8O00222 908 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 GPSM2P81274 684 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 TMEM87AQ8NBN3 555 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 ZBTB12Q9Y330 459 aaPredicted RBP5.58□□□□□ -1.52
UBE4A-202ENST00000431736 SCNN1DP51172 638 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 EXOSC9Q06265 439 aaKnown RBP5.58□□□□□ -1.52
UBE4A-202ENST00000431736 MFSD14CQ5VZR4 134 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 OTUD5Q96G74 571 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 MBIPQ9NS73 344 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 ZNF541Q9H0D2 1346 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 BCAMP50895 628 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 SP3Q02447 781 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 UBE4AQ14139 1066 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 PLS1Q14651 629 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 CASC1Q6TDU7 716 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 TBC1D16Q8TBP0 767 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 ELP3Q9H9T3 547 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 CNTNAP1P78357 1384 aa5.58□□□□□ -1.52
UBE4A-202ENST00000431736 PRKCSHP14314 528 aaPredicted RBP5.57□□□□□ -1.52
UBE4A-202ENST00000431736 FGD1P98174 961 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 PUM3Q15397 648 aaKnown RBP5.57□□□□□ -1.52
UBE4A-202ENST00000431736 NHSQ6T4R5 1651 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 GNAI2P04899 355 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 HOXA10P31260 410 aaPredicted RBP5.57□□□□□ -1.52
UBE4A-202ENST00000431736 GCKRQ14397 625 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 NBPF3Q9H094 633 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 IQSEC3Q9UPP2 1182 aaPredicted RBP5.57□□□□□ -1.52
UBE4A-202ENST00000431736 NRAPQ86VF7 1730 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 PIK3C2AO00443 1686 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 TTC6Q86TZ1 520 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 ZNF34Q8IZ26 560 aa5.57□□□□□ -1.52
UBE4A-202ENST00000431736 GTF3C2Q8WUA4 911 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms