RNA–Protein interactions for RNA: ENST00000431651.5

COA1-208, Transcript of cytochrome c oxidase assembly factor 1 homolog, human

APPRIS ALT2 TSL 3

Gene COA1, Length 720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COA1-208	ENST00000431651	DLK2	Q6UY11	383 aa		13.88	□□□□□ -0.19
COA1-208	ENST00000431651	USP17L1	Q7RTZ2	530 aa		13.88	□□□□□ -0.19
COA1-208	ENST00000431651	PODN	Q7Z5L7	613 aa		13.88	□□□□□ -0.19
COA1-208	ENST00000431651	FBXW7	Q969H0	707 aa		13.88	□□□□□ -0.19
COA1-208	ENST00000431651	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.88	□□□□□ -0.19
COA1-208	ENST00000431651	CNNM1	Q9NRU3	951 aa		13.88	□□□□□ -0.19
COA1-208	ENST00000431651		A0A1B0GUL6	1792 aa		13.87	□□□□□ -0.19
COA1-208	ENST00000431651	BRPF1	P55201	1214 aa	Predicted RBP	13.87	□□□□□ -0.19
COA1-208	ENST00000431651	RABL6	Q3YEC7	729 aa	Predicted RBP	13.87	□□□□□ -0.19
COA1-208	ENST00000431651	JMY	Q8N9B5	988 aa		13.87	□□□□□ -0.19
COA1-208	ENST00000431651	GML	Q99445	158 aa		13.87	□□□□□ -0.19
COA1-208	ENST00000431651	COA1	Q9GZY4	146 aa		13.87	□□□□□ -0.19
COA1-208	ENST00000431651	PGAP2	Q9UHJ9	254 aa		13.87	□□□□□ -0.19
COA1-208	ENST00000431651	TNN	Q9UQP3	1299 aa		13.87	□□□□□ -0.19
COA1-208	ENST00000431651	IRS2	Q9Y4H2	1338 aa		13.87	□□□□□ -0.19
COA1-208	ENST00000431651	PSME4	Q14997	1843 aa		13.86	□□□□□ -0.19
COA1-208	ENST00000431651	BCAR3	O75815	825 aa		13.86	□□□□□ -0.19
COA1-208	ENST00000431651	KIF4B	Q2VIQ3	1234 aa		13.86	□□□□□ -0.19
COA1-208	ENST00000431651	DACT2	Q5SW24	774 aa		13.86	□□□□□ -0.19
COA1-208	ENST00000431651	CST9	Q5W186	159 aa		13.86	□□□□□ -0.19
COA1-208	ENST00000431651	API5	Q9BZZ5	524 aa	Known RBP	13.86	□□□□□ -0.19
COA1-208	ENST00000431651	ASTN2	O75129	1339 aa	Predicted RBP	13.86	□□□□□ -0.19
COA1-208	ENST00000431651	LRRC24	Q50LG9	513 aa		13.85	□□□□□ -0.19
COA1-208	ENST00000431651	USP48	Q86UV5	1035 aa		13.85	□□□□□ -0.19
COA1-208	ENST00000431651	AGBL3	Q8NEM8	1001 aa		13.85	□□□□□ -0.19
COA1-208	ENST00000431651	KLHDC4	Q8TBB5	520 aa		13.85	□□□□□ -0.19
COA1-208	ENST00000431651	ZC3H15	Q8WU90	426 aa	Known RBP	13.85	□□□□□ -0.19
COA1-208	ENST00000431651	CD209	Q9NNX6	404 aa		13.85	□□□□□ -0.19
COA1-208	ENST00000431651	RIPOR2	Q9Y4F9	1068 aa		13.85	□□□□□ -0.19
COA1-208	ENST00000431651	CNTNAP1	P78357	1384 aa		13.84	□□□□□ -0.19
COA1-208	ENST00000431651	ZNF280A	P59817	542 aa	Predicted RBP	13.84	□□□□□ -0.19
COA1-208	ENST00000431651	GTF2I	P78347	998 aa		13.84	□□□□□ -0.19
COA1-208	ENST00000431651	TTLL5	Q6EMB2	1281 aa		13.84	□□□□□ -0.19
COA1-208	ENST00000431651	ZNF408	Q9H9D4	720 aa		13.84	□□□□□ -0.19
COA1-208	ENST00000431651	ABT1	Q9ULW3	272 aa	Known RBP	13.84	□□□□□ -0.19
COA1-208	ENST00000431651	ZNF646	O15015	1829 aa	Predicted RBP	13.84	□□□□□ -0.19
COA1-208	ENST00000431651	POLR2A	P24928	1970 aa	Known RBP	13.83	□□□□□ -0.19
COA1-208	ENST00000431651	ZNF609	O15014	1411 aa		13.83	□□□□□ -0.2
COA1-208	ENST00000431651	TRPM7	Q96QT4	1865 aa		13.83	□□□□□ -0.2
COA1-208	ENST00000431651	CELF2	O95319	508 aa	Known RBP	13.83	□□□□□ -0.2
COA1-208	ENST00000431651	USP17L8	P0C7I0	530 aa		13.83	□□□□□ -0.2
COA1-208	ENST00000431651	VEGFB	P49765	207 aa		13.83	□□□□□ -0.2
COA1-208	ENST00000431651	STRIP1	Q5VSL9	837 aa		13.83	□□□□□ -0.2
COA1-208	ENST00000431651	C15orf52	Q6ZUT6	534 aa	Known RBP	13.83	□□□□□ -0.2
COA1-208	ENST00000431651	CDC37L1	Q7L3B6	337 aa		13.83	□□□□□ -0.2
COA1-208	ENST00000431651	FRAT1	Q92837	279 aa	Predicted RBP	13.83	□□□□□ -0.2
COA1-208	ENST00000431651	GGA3	Q9NZ52	723 aa		13.83	□□□□□ -0.2
COA1-208	ENST00000431651	JAG2	Q9Y219	1238 aa		13.83	□□□□□ -0.2
COA1-208	ENST00000431651	KIF16B	Q96L93	1317 aa		13.83	□□□□□ -0.2
COA1-208	ENST00000431651	ADM5	C9JUS6	153 aa		13.82	□□□□□ -0.2
COA1-208	ENST00000431651	UBTFL1	P0CB47	393 aa	Predicted RBP	13.82	□□□□□ -0.2
COA1-208	ENST00000431651	RFX5	P48382	616 aa	Predicted RBP	13.82	□□□□□ -0.2
COA1-208	ENST00000431651	SCARF1	Q14162	830 aa		13.82	□□□□□ -0.2
COA1-208	ENST00000431651	DEFB115	Q30KQ5	88 aa		13.82	□□□□□ -0.2
COA1-208	ENST00000431651	KRT26	Q7Z3Y9	468 aa		13.82	□□□□□ -0.2
COA1-208	ENST00000431651	MEIS3	Q99687	375 aa		13.82	□□□□□ -0.2
COA1-208	ENST00000431651	MYOZ2	Q9NPC6	264 aa		13.82	□□□□□ -0.2
COA1-208	ENST00000431651	SCAF8	Q9UPN6	1271 aa	Known RBP	13.82	□□□□□ -0.2
COA1-208	ENST00000431651	RASSF10	A6NK89	507 aa		13.81	□□□□□ -0.2
COA1-208	ENST00000431651	TRIM27	P14373	513 aa		13.81	□□□□□ -0.2
COA1-208	ENST00000431651	GYG1	P46976	350 aa		13.81	□□□□□ -0.2
COA1-208	ENST00000431651	UBE4A	Q14139	1066 aa		13.81	□□□□□ -0.2
COA1-208	ENST00000431651	METTL24	Q5JXM2	366 aa		13.81	□□□□□ -0.2
COA1-208	ENST00000431651	ZNF804A	Q7Z570	1209 aa		13.81	□□□□□ -0.2
COA1-208	ENST00000431651	KIAA0825	Q8IV33	1275 aa		13.81	□□□□□ -0.2
COA1-208	ENST00000431651	CERS5	Q8N5B7	392 aa		13.81	□□□□□ -0.2
COA1-208	ENST00000431651	ARHGAP45	Q92619	1136 aa		13.81	□□□□□ -0.2
COA1-208	ENST00000431651	CLUAP1	Q96AJ1	413 aa		13.81	□□□□□ -0.2
COA1-208	ENST00000431651	DCPS	Q96C86	337 aa	Known RBP	13.81	□□□□□ -0.2
COA1-208	ENST00000431651	LRRFIP2	Q9Y608	721 aa	Known RBP	13.81	□□□□□ -0.2
COA1-208	ENST00000431651	PCNT	O95613	3336 aa		13.8	□□□□□ -0.2
COA1-208	ENST00000431651	HSPA1A	P0DMV8	641 aa	Known RBP	13.8	□□□□□ -0.2
COA1-208	ENST00000431651	HSPA1B	P0DMV9	641 aa	Known RBP	13.8	□□□□□ -0.2
COA1-208	ENST00000431651	IL1R1	P14778	569 aa		13.8	□□□□□ -0.2
COA1-208	ENST00000431651	NBPF9	Q3BBW0	867 aa		13.8	□□□□□ -0.2
COA1-208	ENST00000431651	ANGEL2	Q5VTE6	544 aa	Known RBP	13.8	□□□□□ -0.2
COA1-208	ENST00000431651	INTS3	Q68E01	1043 aa	Known RBP	13.8	□□□□□ -0.2
COA1-208	ENST00000431651	ATF7IP	Q6VMQ6	1270 aa		13.8	□□□□□ -0.2
COA1-208	ENST00000431651	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.8	□□□□□ -0.2
COA1-208	ENST00000431651	TLL2	Q9Y6L7	1015 aa		13.8	□□□□□ -0.2
COA1-208	ENST00000431651	ZBED9	Q6R2W3	1325 aa		13.8	□□□□□ -0.2
COA1-208	ENST00000431651	MROH5	Q6ZUA9	1318 aa		13.8	□□□□□ -0.2
COA1-208	ENST00000431651	IPO8	O15397	1037 aa	Known RBP	13.79	□□□□□ -0.2
COA1-208	ENST00000431651	PTPN12	Q05209	780 aa	Known RBP	13.79	□□□□□ -0.2
COA1-208	ENST00000431651	GRM1	Q13255	1194 aa		13.79	□□□□□ -0.2
COA1-208	ENST00000431651	CYP4F22	Q6NT55	531 aa		13.79	□□□□□ -0.2
COA1-208	ENST00000431651	VGLL2	Q8N8G2	317 aa		13.79	□□□□□ -0.2
COA1-208	ENST00000431651	FAM84B	Q96KN1	310 aa	Predicted RBP	13.79	□□□□□ -0.2
COA1-208	ENST00000431651	SIL1	Q9H173	461 aa		13.79	□□□□□ -0.2
COA1-208	ENST00000431651	MYO3B	Q8WXR4	1341 aa		13.79	□□□□□ -0.2
COA1-208	ENST00000431651		F8W031	263 aa	Predicted RBP	13.78	□□□□□ -0.2
COA1-208	ENST00000431651	SASH1	O94885	1247 aa		13.78	□□□□□ -0.2
COA1-208	ENST00000431651	PDE8B	O95263	885 aa		13.78	□□□□□ -0.2
COA1-208	ENST00000431651	HIBADH	P31937	336 aa	Known RBP	13.78	□□□□□ -0.2
COA1-208	ENST00000431651	SULF1	Q8IWU6	871 aa		13.78	□□□□□ -0.2
COA1-208	ENST00000431651	OGFOD1	Q8N543	542 aa		13.78	□□□□□ -0.2
COA1-208	ENST00000431651	TDRD7	Q8NHU6	1098 aa	Known RBP	13.78	□□□□□ -0.2
COA1-208	ENST00000431651	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.78	□□□□□ -0.2
COA1-208	ENST00000431651	PA2G4	Q9UQ80	394 aa	Known RBP	13.78	□□□□□ -0.2
COA1-208	ENST00000431651	WDR33	Q9C0J8	1336 aa	Known RBP	13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms