RNA–Protein interactions for RNA: ENST00000431243.6

MTHFR-209, Transcript of methylenetetrahydrofolate reductase, humanhuman

TSL 1 (best)

Gene MTHFR, Length 1,116 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-209ENST00000431243 USP17L3A6NCW0 530 aa12.43□□□□□ -0.42
MTHFR-209ENST00000431243 USP17L4A6NCW7 530 aa12.43□□□□□ -0.42
MTHFR-209ENST00000431243 ELL2O00472 640 aaPredicted RBP12.43□□□□□ -0.42
MTHFR-209ENST00000431243 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
MTHFR-209ENST00000431243 USP17L1Q7RTZ2 530 aa12.43□□□□□ -0.42
MTHFR-209ENST00000431243 ANKRD18AQ8IVF6 992 aa12.43□□□□□ -0.42
MTHFR-209ENST00000431243 ZNF428Q96B54 188 aa12.43□□□□□ -0.42
MTHFR-209ENST00000431243 MBIPQ9NS73 344 aa12.43□□□□□ -0.42
MTHFR-209ENST00000431243 CWC25Q9NXE8 425 aaPredicted RBP12.43□□□□□ -0.42
MTHFR-209ENST00000431243 ASTN2O75129 1339 aaPredicted RBP12.42□□□□□ -0.42
MTHFR-209ENST00000431243 COL4A1P02462 1669 aa12.42□□□□□ -0.42
MTHFR-209ENST00000431243 TNRC18O15417 2968 aaPredicted RBP12.42□□□□□ -0.42
MTHFR-209ENST00000431243 DDX58O95786 925 aaKnown RBP12.42□□□□□ -0.42
MTHFR-209ENST00000431243 CDC5LQ99459 802 aaKnown RBP12.42□□□□□ -0.42
MTHFR-209ENST00000431243 PAPPA2Q9BXP8 1791 aa12.42□□□□□ -0.42
MTHFR-209ENST00000431243 MYO3BQ8WXR4 1341 aa12.41□□□□□ -0.42
MTHFR-209ENST00000431243 TM4SF4P48230 202 aa12.41□□□□□ -0.42
MTHFR-209ENST00000431243 HNRNPUQ00839 825 aaKnown RBP eCLIP12.41□□□□□ -0.42
MTHFR-209ENST00000431243 OGFOD1Q8N543 542 aa12.41□□□□□ -0.42
MTHFR-209ENST00000431243 MYD88Q99836 296 aa12.41□□□□□ -0.42
MTHFR-209ENST00000431243 METTL22Q9BUU2 404 aaPredicted RBP12.41□□□□□ -0.42
MTHFR-209ENST00000431243 BSDC1Q9NW68 430 aaPredicted RBP12.41□□□□□ -0.42
MTHFR-209ENST00000431243 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
MTHFR-209ENST00000431243 TSR2Q969E8 191 aaKnown RBP12.4□□□□□ -0.42
MTHFR-209ENST00000431243 CFHR5Q9BXR6 569 aa12.4□□□□□ -0.42
MTHFR-209ENST00000431243 PHAXQ9H814 394 aaKnown RBP12.4□□□□□ -0.42
MTHFR-209ENST00000431243 MED23Q9ULK4 1368 aa12.4□□□□□ -0.42
MTHFR-209ENST00000431243 IL16Q14005 1332 aa12.39□□□□□ -0.43
MTHFR-209ENST00000431243 PSME4Q14997 1843 aa12.39□□□□□ -0.43
MTHFR-209ENST00000431243 NF2P35240 595 aa12.39□□□□□ -0.43
MTHFR-209ENST00000431243 CTSWP56202 376 aa12.39□□□□□ -0.43
MTHFR-209ENST00000431243 SOX10P56693 466 aa12.39□□□□□ -0.43
MTHFR-209ENST00000431243 STRIP1Q5VSL9 837 aa12.39□□□□□ -0.43
MTHFR-209ENST00000431243 CCDC30Q5VVM6 783 aa12.39□□□□□ -0.43
MTHFR-209ENST00000431243 COA1Q9GZY4 146 aa12.39□□□□□ -0.43
MTHFR-209ENST00000431243 MYH16Q9H6N6 1097 aa12.39□□□□□ -0.43
MTHFR-209ENST00000431243 HDAC9Q9UKV0 1011 aa12.39□□□□□ -0.43
MTHFR-209ENST00000431243 HPS5Q9UPZ3 1129 aa12.39□□□□□ -0.43
MTHFR-209ENST00000431243 UBE2Q2LH0YL09 131 aa12.38□□□□□ -0.43
MTHFR-209ENST00000431243 SREBF2Q12772 1141 aa12.38□□□□□ -0.43
MTHFR-209ENST00000431243 DACT2Q5SW24 774 aa12.38□□□□□ -0.43
MTHFR-209ENST00000431243 TTLL11Q8NHH1 800 aa12.38□□□□□ -0.43
MTHFR-209ENST00000431243 ZNF296Q8WUU4 475 aaPredicted RBP12.38□□□□□ -0.43
MTHFR-209ENST00000431243 MINPP1Q9UNW1 487 aa12.38□□□□□ -0.43
MTHFR-209ENST00000431243 LEMD3Q9Y2U8 911 aa12.38□□□□□ -0.43
MTHFR-209ENST00000431243 GPR25O00155 361 aa12.37□□□□□ -0.43
MTHFR-209ENST00000431243 WNT10BO00744 389 aa12.37□□□□□ -0.43
MTHFR-209ENST00000431243 CCT4P50991 539 aaKnown RBP12.37□□□□□ -0.43
MTHFR-209ENST00000431243 NBPF9Q3BBW0 867 aa12.37□□□□□ -0.43
MTHFR-209ENST00000431243 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
MTHFR-209ENST00000431243 C8orf58Q8NAV2 365 aa12.37□□□□□ -0.43
MTHFR-209ENST00000431243 ALDH1A1P00352 501 aa12.36□□□□□ -0.43
MTHFR-209ENST00000431243 INHBEP58166 350 aa12.36□□□□□ -0.43
MTHFR-209ENST00000431243 NEXNQ0ZGT2 675 aa12.36□□□□□ -0.43
MTHFR-209ENST00000431243 FBXO46Q6PJ61 603 aaPredicted RBP12.36□□□□□ -0.43
MTHFR-209ENST00000431243 ARMC9Q7Z3E5 817 aa12.36□□□□□ -0.43
MTHFR-209ENST00000431243 APOBEC3FQ8IUX4 373 aaKnown RBP12.36□□□□□ -0.43
MTHFR-209ENST00000431243 CCDC85AQ96PX6 553 aaPredicted RBP12.36□□□□□ -0.43
MTHFR-209ENST00000431243 SPINK5Q9NQ38 1064 aaPredicted RBP12.36□□□□□ -0.43
MTHFR-209ENST00000431243 MAP3K2Q9Y2U5 619 aa12.36□□□□□ -0.43
MTHFR-209ENST00000431243 UNCXA6NJT0 531 aa12.35□□□□□ -0.43
MTHFR-209ENST00000431243 E9PSI1 815 aa12.35□□□□□ -0.43
MTHFR-209ENST00000431243 TBC1D8O95759 1140 aa12.35□□□□□ -0.43
MTHFR-209ENST00000431243 IGKV5-2P06315 115 aa12.35□□□□□ -0.43
MTHFR-209ENST00000431243 EXOSC9Q06265 439 aaKnown RBP12.35□□□□□ -0.43
MTHFR-209ENST00000431243 TTLL12Q14166 644 aaPredicted RBP12.35□□□□□ -0.43
MTHFR-209ENST00000431243 LDLRAD1Q5T700 205 aa12.35□□□□□ -0.43
MTHFR-209ENST00000431243 MOB2Q70IA6 237 aa12.35□□□□□ -0.43
MTHFR-209ENST00000431243 CDCA7LQ96GN5 454 aa12.35□□□□□ -0.43
MTHFR-209ENST00000431243 ANKRD2Q9GZV1 360 aa12.35□□□□□ -0.43
MTHFR-209ENST00000431243 PI4KAP2A4QPH2 592 aa12.34□□□□□ -0.43
MTHFR-209ENST00000431243 FKTNO75072 461 aa12.34□□□□□ -0.43
MTHFR-209ENST00000431243 IGHMBP2P38935 993 aaKnown RBP12.34□□□□□ -0.43
MTHFR-209ENST00000431243 TWISTNBQ3B726 338 aaPredicted RBP12.34□□□□□ -0.43
MTHFR-209ENST00000431243 TTLL5Q6EMB2 1281 aa12.34□□□□□ -0.43
MTHFR-209ENST00000431243 TSPYL6Q8N831 410 aa12.34□□□□□ -0.43
MTHFR-209ENST00000431243 PI4KAP1Q8N8J0 262 aa12.34□□□□□ -0.43
MTHFR-209ENST00000431243 JARID2Q92833 1246 aaPredicted RBP12.34□□□□□ -0.43
MTHFR-209ENST00000431243 ZBED3Q96IU2 234 aaPredicted RBP12.34□□□□□ -0.43
MTHFR-209ENST00000431243 PLA2G12BQ9BX93 195 aa12.34□□□□□ -0.43
MTHFR-209ENST00000431243 GREM2Q9H772 168 aa12.34□□□□□ -0.43
MTHFR-209ENST00000431243 FANCIQ9NVI1 1328 aa12.34□□□□□ -0.43
MTHFR-209ENST00000431243 COL1A1P02452 1464 aaPredicted RBP12.34□□□□□ -0.43
MTHFR-209ENST00000431243 WTIPA6NIX2 430 aaPredicted RBP12.33□□□□□ -0.44
MTHFR-209ENST00000431243 H7C1W4 665 aa12.33□□□□□ -0.44
MTHFR-209ENST00000431243 PTPN12Q05209 780 aaKnown RBP12.33□□□□□ -0.44
MTHFR-209ENST00000431243 SLFN5Q08AF3 891 aa12.33□□□□□ -0.44
MTHFR-209ENST00000431243 MAP3K11Q16584 847 aa12.33□□□□□ -0.44
MTHFR-209ENST00000431243 PRAMEF18Q5VWM3 479 aa12.33□□□□□ -0.44
MTHFR-209ENST00000431243 SPRYD7Q5W111 196 aa12.33□□□□□ -0.44
MTHFR-209ENST00000431243 MTMR14Q8NCE2 650 aa12.33□□□□□ -0.44
MTHFR-209ENST00000431243 PPP2R3BQ9Y5P8 575 aa12.33□□□□□ -0.44
MTHFR-209ENST00000431243 ZNF804BA4D1E1 1349 aa12.33□□□□□ -0.44
MTHFR-209ENST00000431243 ZNF521Q96K83 1311 aa12.33□□□□□ -0.44
MTHFR-209ENST00000431243 MANSC4A6NHS7 340 aaPredicted RBP12.32□□□□□ -0.44
MTHFR-209ENST00000431243 NEURL1BA8MQ27 555 aa12.32□□□□□ -0.44
MTHFR-209ENST00000431243 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
MTHFR-209ENST00000431243 MXD3Q9BW11 206 aa12.32□□□□□ -0.44
MTHFR-209ENST00000431243 STK31Q9BXU1 1019 aa12.32□□□□□ -0.44
MTHFR-209ENST00000431243 SCAF8Q9UPN6 1271 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms