RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 G3V3G9 751 aa20.81■□□□□ 0.92
TTC28-202ENST00000431039 DCAF8Q5TAQ9 597 aa20.81■□□□□ 0.92
TTC28-202ENST00000431039 INTS3Q68E01 1043 aaKnown RBP20.81■□□□□ 0.92
TTC28-202ENST00000431039 DNAAF4Q8WXU2 420 aa20.81■□□□□ 0.92
TTC28-202ENST00000431039 ZIC5Q96T25 663 aa20.81■□□□□ 0.92
TTC28-202ENST00000431039 IRX6P78412 446 aaPredicted RBP20.8■□□□□ 0.92
TTC28-202ENST00000431039 KIF4BQ2VIQ3 1234 aa20.8■□□□□ 0.92
TTC28-202ENST00000431039 CCDC152Q4G0S7 254 aa20.8■□□□□ 0.92
TTC28-202ENST00000431039 TMEM57Q8N5G2 664 aa20.8■□□□□ 0.92
TTC28-202ENST00000431039 DCPSQ96C86 337 aaKnown RBP20.8■□□□□ 0.92
TTC28-202ENST00000431039 CWC25Q9NXE8 425 aaPredicted RBP20.8■□□□□ 0.92
TTC28-202ENST00000431039 GGA1Q9UJY5 639 aa20.8■□□□□ 0.92
TTC28-202ENST00000431039 AKAP11Q9UKA4 1901 aa20.8■□□□□ 0.92
TTC28-202ENST00000431039 CA12O43570 354 aa20.79■□□□□ 0.92
TTC28-202ENST00000431039 PDE8AO60658 829 aa20.79■□□□□ 0.92
TTC28-202ENST00000431039 PCCAP05165 728 aaPredicted RBP20.79■□□□□ 0.92
TTC28-202ENST00000431039 HSP90B1P14625 803 aaKnown RBP20.79■□□□□ 0.92
TTC28-202ENST00000431039 CCT4P50991 539 aaKnown RBP20.79■□□□□ 0.92
TTC28-202ENST00000431039 MVPQ14764 893 aaKnown RBP20.79■□□□□ 0.92
TTC28-202ENST00000431039 ERICH6BQ5W0A0 696 aa20.79■□□□□ 0.92
TTC28-202ENST00000431039 CCDC191Q8NCU4 936 aa20.79■□□□□ 0.92
TTC28-202ENST00000431039 CRBNQ96SW2 442 aa20.79■□□□□ 0.92
TTC28-202ENST00000431039 GBA2Q9HCG7 927 aaPredicted RBP20.79■□□□□ 0.92
TTC28-202ENST00000431039 PODXL2Q9NZ53 605 aa20.79■□□□□ 0.92
TTC28-202ENST00000431039 MAP3K2Q9Y2U5 619 aa20.79■□□□□ 0.92
TTC28-202ENST00000431039 COG6Q9Y2V7 657 aa20.79■□□□□ 0.92
TTC28-202ENST00000431039 VIL1P09327 827 aaKnown RBP20.78■□□□□ 0.92
TTC28-202ENST00000431039 NOGQ13253 232 aa20.78■□□□□ 0.92
TTC28-202ENST00000431039 GGA3Q9NZ52 723 aa20.78■□□□□ 0.92
TTC28-202ENST00000431039 ASTN2O75129 1339 aaPredicted RBP20.78■□□□□ 0.92
TTC28-202ENST00000431039 FAM161AQ3B820 660 aa20.77■□□□□ 0.92
TTC28-202ENST00000431039 SLC4A10Q6U841 1118 aa20.77■□□□□ 0.92
TTC28-202ENST00000431039 C2orf69Q8N8R5 385 aa20.77■□□□□ 0.92
TTC28-202ENST00000431039 METTL22Q9BUU2 404 aaPredicted RBP20.77■□□□□ 0.92
TTC28-202ENST00000431039 BEND3Q5T5X7 828 aa20.76■□□□□ 0.91
TTC28-202ENST00000431039 RGMBQ6NW40 437 aa20.76■□□□□ 0.91
TTC28-202ENST00000431039 ITPRIPQ8IWB1 547 aa20.76■□□□□ 0.91
TTC28-202ENST00000431039 DDX19BQ9UMR2 479 aa20.76■□□□□ 0.91
TTC28-202ENST00000431039 ANKRD18AQ8IVF6 992 aa20.75■□□□□ 0.91
TTC28-202ENST00000431039 SULF1Q8IWU6 871 aa20.75■□□□□ 0.91
TTC28-202ENST00000431039 EXOC6Q8TAG9 804 aa20.75■□□□□ 0.91
TTC28-202ENST00000431039 SRCIN1Q9C0H9 1055 aa20.75■□□□□ 0.91
TTC28-202ENST00000431039 MCOLN1Q9GZU1 580 aa20.75■□□□□ 0.91
TTC28-202ENST00000431039 FAM155AB1AL88 458 aaPredicted RBP20.74■□□□□ 0.91
TTC28-202ENST00000431039 ALDH1L1O75891 902 aa20.74■□□□□ 0.91
TTC28-202ENST00000431039 AAMPQ13685 434 aa20.74■□□□□ 0.91
TTC28-202ENST00000431039 RSBN1LQ6PCB5 846 aaPredicted RBP20.74■□□□□ 0.91
TTC28-202ENST00000431039 LINS1Q8NG48 757 aa20.74■□□□□ 0.91
TTC28-202ENST00000431039 CHMP4BQ9H444 224 aaKnown RBP20.74■□□□□ 0.91
TTC28-202ENST00000431039 XDHP47989 1333 aa20.74■□□□□ 0.91
TTC28-202ENST00000431039 ZNF646O15015 1829 aaPredicted RBP20.74■□□□□ 0.91
TTC28-202ENST00000431039 ZNF157P51786 506 aaPredicted RBP20.73■□□□□ 0.91
TTC28-202ENST00000431039 NEXNQ0ZGT2 675 aa20.73■□□□□ 0.91
TTC28-202ENST00000431039 CDCA5Q96FF9 252 aa20.73■□□□□ 0.91
TTC28-202ENST00000431039 CACNA1FO60840 1977 aa20.72■□□□□ 0.91
TTC28-202ENST00000431039 ZBTB7BO15156 539 aaPredicted RBP20.72■□□□□ 0.91
TTC28-202ENST00000431039 CTSWP56202 376 aa20.72■□□□□ 0.91
TTC28-202ENST00000431039 DGKZQ13574 1117 aa20.72■□□□□ 0.91
TTC28-202ENST00000431039 SCARF1Q14162 830 aa20.72■□□□□ 0.91
TTC28-202ENST00000431039 ANGEL2Q5VTE6 544 aaKnown RBP20.72■□□□□ 0.91
TTC28-202ENST00000431039 AGBL3Q8NEM8 1001 aa20.72■□□□□ 0.91
TTC28-202ENST00000431039 ZNF609O15014 1411 aa20.71■□□□□ 0.91
TTC28-202ENST00000431039 WTIPA6NIX2 430 aaPredicted RBP20.71■□□□□ 0.91
TTC28-202ENST00000431039 IGKV5-2P06315 115 aa20.71■□□□□ 0.91
TTC28-202ENST00000431039 ATP2B4P23634 1241 aa20.71■□□□□ 0.91
TTC28-202ENST00000431039 ZNF280AP59817 542 aaPredicted RBP20.71■□□□□ 0.91
TTC28-202ENST00000431039 KIF23Q02241 960 aaPredicted RBP20.71■□□□□ 0.91
TTC28-202ENST00000431039 CCDC102AQ96A19 550 aa20.71■□□□□ 0.91
TTC28-202ENST00000431039 CDC5LQ99459 802 aaKnown RBP20.71■□□□□ 0.91
TTC28-202ENST00000431039 GREM2Q9H772 168 aa20.7■□□□□ 0.9
TTC28-202ENST00000431039 SCAF8Q9UPN6 1271 aaKnown RBP20.7■□□□□ 0.9
TTC28-202ENST00000431039 PAPPA2Q9BXP8 1791 aa20.69■□□□□ 0.9
TTC28-202ENST00000431039 USP17L8P0C7I0 530 aa20.69■□□□□ 0.9
TTC28-202ENST00000431039 CWF19L2Q2TBE0 894 aaKnown RBP20.69■□□□□ 0.9
TTC28-202ENST00000431039 TTLL11Q8NHH1 800 aa20.69■□□□□ 0.9
TTC28-202ENST00000431039 MYOZ2Q9NPC6 264 aa20.69■□□□□ 0.9
TTC28-202ENST00000431039 ZBTB40Q9NUA8 1239 aa20.69■□□□□ 0.9
TTC28-202ENST00000431039 GTF3C3Q9Y5Q9 886 aa20.69■□□□□ 0.9
TTC28-202ENST00000431039 USP17L3A6NCW0 530 aa20.68■□□□□ 0.9
TTC28-202ENST00000431039 USP17L4A6NCW7 530 aa20.68■□□□□ 0.9
TTC28-202ENST00000431039 NEURL1BA8MQ27 555 aa20.68■□□□□ 0.9
TTC28-202ENST00000431039 SLC10A3P09131 477 aa20.68■□□□□ 0.9
TTC28-202ENST00000431039 USP17L1Q7RTZ2 530 aa20.68■□□□□ 0.9
TTC28-202ENST00000431039 FBXW7Q969H0 707 aa20.68■□□□□ 0.9
TTC28-202ENST00000431039 GMLQ99445 158 aa20.68■□□□□ 0.9
TTC28-202ENST00000431039 MLLT1Q03111 559 aaPredicted RBP20.67■□□□□ 0.9
TTC28-202ENST00000431039 PODNQ7Z5L7 613 aa20.67■□□□□ 0.9
TTC28-202ENST00000431039 MXD3Q9BW11 206 aa20.67■□□□□ 0.9
TTC28-202ENST00000431039 USP44Q9H0E7 712 aa20.67■□□□□ 0.9
TTC28-202ENST00000431039 MINPP1Q9UNW1 487 aa20.67■□□□□ 0.9
TTC28-202ENST00000431039 MED23Q9ULK4 1368 aa20.67■□□□□ 0.9
TTC28-202ENST00000431039 TRPA1O75762 1119 aa20.66■□□□□ 0.9
TTC28-202ENST00000431039 GNAI3P08754 354 aa20.66■□□□□ 0.9
TTC28-202ENST00000431039 GCKRQ14397 625 aa20.66■□□□□ 0.9
TTC28-202ENST00000431039 UBE3BQ7Z3V4 1068 aa20.66■□□□□ 0.9
TTC28-202ENST00000431039 BSDC1Q9NW68 430 aaPredicted RBP20.66■□□□□ 0.9
TTC28-202ENST00000431039 RNF186Q9NXI6 227 aa20.66■□□□□ 0.9
TTC28-202ENST00000431039 SAGE1Q9NXZ1 904 aa20.66■□□□□ 0.9
TTC28-202ENST00000431039 RASAL3Q86YV0 1011 aa20.65■□□□□ 0.9
TTC28-202ENST00000431039 MEIS3Q99687 375 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms