RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 NFKBIEO00221 500 aa13.52□□□□□ -0.25
CHD4-202ENST00000430771 IFIT2P09913 472 aaKnown RBP13.52□□□□□ -0.25
CHD4-202ENST00000430771 ANKRD45Q5TZF3 282 aa13.52□□□□□ -0.25
CHD4-202ENST00000430771 C15orf52Q6ZUT6 534 aaKnown RBP13.52□□□□□ -0.25
CHD4-202ENST00000430771 ZNF804AQ7Z570 1209 aa13.52□□□□□ -0.25
CHD4-202ENST00000430771 POLLQ9UGP5 575 aa13.52□□□□□ -0.25
CHD4-202ENST00000430771 CCDC88AQ3V6T2 1871 aa13.51□□□□□ -0.25
CHD4-202ENST00000430771 PPIP5K2O43314 1243 aa13.51□□□□□ -0.25
CHD4-202ENST00000430771 RASSF7Q02833 373 aa13.51□□□□□ -0.25
CHD4-202ENST00000430771 KIAA2012Q0VF49 1180 aa13.51□□□□□ -0.25
CHD4-202ENST00000430771 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
CHD4-202ENST00000430771 CAVIN4Q5BKX8 364 aa13.51□□□□□ -0.25
CHD4-202ENST00000430771 ARHGAP27Q6ZUM4 889 aa13.51□□□□□ -0.25
CHD4-202ENST00000430771 VPS37DQ86XT2 251 aa13.51□□□□□ -0.25
CHD4-202ENST00000430771 GPATCH3Q96I76 525 aa13.51□□□□□ -0.25
CHD4-202ENST00000430771 NEUROD6Q96NK8 337 aa13.51□□□□□ -0.25
CHD4-202ENST00000430771 ZC3H12CQ9C0D7 883 aaKnown RBP13.51□□□□□ -0.25
CHD4-202ENST00000430771 GTF3C3Q9Y5Q9 886 aa13.51□□□□□ -0.25
CHD4-202ENST00000430771 SBF1O95248 1867 aa13.5□□□□□ -0.25
CHD4-202ENST00000430771 PSME4Q14997 1843 aa13.5□□□□□ -0.25
CHD4-202ENST00000430771 G3V3G9 751 aa13.5□□□□□ -0.25
CHD4-202ENST00000430771 SMARCA5O60264 1052 aaPredicted RBP13.5□□□□□ -0.25
CHD4-202ENST00000430771 IARSP41252 1262 aaKnown RBP13.5□□□□□ -0.25
CHD4-202ENST00000430771 NUCB1Q02818 461 aa13.5□□□□□ -0.25
CHD4-202ENST00000430771 GORABQ5T7V8 394 aa13.5□□□□□ -0.25
CHD4-202ENST00000430771 DCAF8Q5TAQ9 597 aa13.5□□□□□ -0.25
CHD4-202ENST00000430771 CHD1LQ86WJ1 897 aa13.5□□□□□ -0.25
CHD4-202ENST00000430771 EAF2Q96CJ1 260 aaPredicted RBP13.5□□□□□ -0.25
CHD4-202ENST00000430771 XAGE2Q96GT9 111 aa13.5□□□□□ -0.25
CHD4-202ENST00000430771 IRS2Q9Y4H2 1338 aa13.49□□□□□ -0.25
CHD4-202ENST00000430771 SNAP23O00161 211 aa13.49□□□□□ -0.25
CHD4-202ENST00000430771 LMNB1P20700 586 aa13.49□□□□□ -0.25
CHD4-202ENST00000430771 KLRK1P26718 216 aa13.49□□□□□ -0.25
CHD4-202ENST00000430771 AOC3Q16853 763 aa13.49□□□□□ -0.25
CHD4-202ENST00000430771 CCDC158Q5M9N0 1113 aa13.49□□□□□ -0.25
CHD4-202ENST00000430771 NIM1KQ8IY84 436 aa13.49□□□□□ -0.25
CHD4-202ENST00000430771 LARGE2Q8N3Y3 721 aa13.49□□□□□ -0.25
CHD4-202ENST00000430771 GPR101Q96P66 508 aaPredicted RBP13.49□□□□□ -0.25
CHD4-202ENST00000430771 LNPKQ9C0E8 428 aa13.49□□□□□ -0.25
CHD4-202ENST00000430771 BCL11AQ9H165 835 aa13.49□□□□□ -0.25
CHD4-202ENST00000430771 ZNF277Q9NRM2 450 aaPredicted RBP13.49□□□□□ -0.25
CHD4-202ENST00000430771 GNL3LQ9NVN8 582 aaKnown RBP13.49□□□□□ -0.25
CHD4-202ENST00000430771 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
CHD4-202ENST00000430771 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.49□□□□□ -0.25
CHD4-202ENST00000430771 RIMBP2O15034 1052 aa13.48□□□□□ -0.25
CHD4-202ENST00000430771 ADORA1P30542 326 aa13.48□□□□□ -0.25
CHD4-202ENST00000430771 HIBADHP31937 336 aaKnown RBP13.48□□□□□ -0.25
CHD4-202ENST00000430771 TTC39AQ5SRH9 613 aa13.48□□□□□ -0.25
CHD4-202ENST00000430771 JDP2Q8WYK2 163 aa13.48□□□□□ -0.25
CHD4-202ENST00000430771 DBNDD2Q9BQY9 259 aa13.48□□□□□ -0.25
CHD4-202ENST00000430771 COA1Q9GZY4 146 aa13.48□□□□□ -0.25
CHD4-202ENST00000430771 CCDC8Q9H0W5 538 aaPredicted RBP13.48□□□□□ -0.25
CHD4-202ENST00000430771 CHD4Q14839 1912 aa13.48□□□□□ -0.25
CHD4-202ENST00000430771 TTC41PQ6P2S7 1318 aa13.47□□□□□ -0.25
CHD4-202ENST00000430771 UQCRFS1P1P0C7P4 283 aa13.47□□□□□ -0.25
CHD4-202ENST00000430771 GYG1P46976 350 aa13.47□□□□□ -0.25
CHD4-202ENST00000430771 TIMM10P62072 90 aa13.47□□□□□ -0.25
CHD4-202ENST00000430771 CCDC102BQ68D86 513 aa13.47□□□□□ -0.25
CHD4-202ENST00000430771 TLR7Q9NYK1 1049 aaKnown RBP13.47□□□□□ -0.25
CHD4-202ENST00000430771 COL4A5P29400 1685 aa13.47□□□□□ -0.25
CHD4-202ENST00000430771 AOX1Q06278 1338 aa13.46□□□□□ -0.25
CHD4-202ENST00000430771 MAST2Q6P0Q8 1798 aa13.46□□□□□ -0.25
CHD4-202ENST00000430771 SEMA3EO15041 775 aa13.46□□□□□ -0.25
CHD4-202ENST00000430771 ECE2O60344 883 aa13.46□□□□□ -0.25
CHD4-202ENST00000430771 MX1P20591 662 aa13.46□□□□□ -0.25
CHD4-202ENST00000430771 PODNQ7Z5L7 613 aa13.46□□□□□ -0.25
CHD4-202ENST00000430771 FBXO33Q7Z6M2 555 aa13.46□□□□□ -0.25
CHD4-202ENST00000430771 FAM84BQ96KN1 310 aaPredicted RBP13.46□□□□□ -0.25
CHD4-202ENST00000430771 ZNF646O15015 1829 aaPredicted RBP13.46□□□□□ -0.26
CHD4-202ENST00000430771 PDS5AQ29RF7 1337 aaKnown RBP13.45□□□□□ -0.26
CHD4-202ENST00000430771 ZC3H4Q9UPT8 1303 aaKnown RBP13.45□□□□□ -0.26
CHD4-202ENST00000430771 WTIPA6NIX2 430 aaPredicted RBP13.45□□□□□ -0.26
CHD4-202ENST00000430771 ERC2O15083 957 aa13.45□□□□□ -0.26
CHD4-202ENST00000430771 ZBTB22O15209 634 aa13.45□□□□□ -0.26
CHD4-202ENST00000430771 FRAT2O75474 233 aaPredicted RBP13.45□□□□□ -0.26
CHD4-202ENST00000430771 IL1R1P14778 569 aa13.45□□□□□ -0.26
CHD4-202ENST00000430771 ARID4AP29374 1257 aaPredicted RBP13.45□□□□□ -0.26
CHD4-202ENST00000430771 PHKA1P46020 1223 aa13.45□□□□□ -0.26
CHD4-202ENST00000430771 BCAMP50895 628 aa13.45□□□□□ -0.26
CHD4-202ENST00000430771 TXNRD3Q86VQ6 643 aa13.45□□□□□ -0.26
CHD4-202ENST00000430771 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHD4-202ENST00000430771 ZNF512BQ96KM6 892 aaPredicted RBP13.45□□□□□ -0.26
CHD4-202ENST00000430771 DBNDD1Q9H9R9 158 aa13.45□□□□□ -0.26
CHD4-202ENST00000430771 CD209Q9NNX6 404 aa13.45□□□□□ -0.26
CHD4-202ENST00000430771 ECHDC1Q9NTX5 307 aa13.45□□□□□ -0.26
CHD4-202ENST00000430771 RNF181Q9P0P0 153 aa13.45□□□□□ -0.26
CHD4-202ENST00000430771 DENND2AQ9ULE3 1009 aa13.45□□□□□ -0.26
CHD4-202ENST00000430771 SCN9AQ15858 1988 aa13.45□□□□□ -0.26
CHD4-202ENST00000430771 GOLGB1Q14789 3259 aaKnown RBP13.45□□□□□ -0.26
CHD4-202ENST00000430771 SALL3Q9BXA9 1300 aa13.44□□□□□ -0.26
CHD4-202ENST00000430771 COL1A1P02452 1464 aaPredicted RBP13.44□□□□□ -0.26
CHD4-202ENST00000430771 DOK7Q18PE1 504 aa13.44□□□□□ -0.26
CHD4-202ENST00000430771 ZNRF3Q9ULT6 936 aa13.44□□□□□ -0.26
CHD4-202ENST00000430771 AKAP11Q9UKA4 1901 aa13.44□□□□□ -0.26
CHD4-202ENST00000430771 DOCK2Q92608 1830 aa13.43□□□□□ -0.26
CHD4-202ENST00000430771 GLRX3O76003 335 aaKnown RBP13.43□□□□□ -0.26
CHD4-202ENST00000430771 EIF6P56537 245 aaKnown RBP13.43□□□□□ -0.26
CHD4-202ENST00000430771 TDRD7Q8NHU6 1098 aaKnown RBP13.43□□□□□ -0.26
CHD4-202ENST00000430771 AK9Q5TCS8 1911 aa13.43□□□□□ -0.26
CHD4-202ENST00000430771 ATP5JP18859 108 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms