RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 PDE4AP27815 886 aa23.88■■□□□ 1.41
PTCD1-203ENST00000430029 KCNJ4P48050 445 aa23.88■■□□□ 1.41
PTCD1-203ENST00000430029 TXNRD3Q86VQ6 643 aa23.88■■□□□ 1.41
PTCD1-203ENST00000430029 SKAP1Q86WV1 359 aa23.88■■□□□ 1.41
PTCD1-203ENST00000430029 RTKN2Q8IZC4 609 aa23.88■■□□□ 1.41
PTCD1-203ENST00000430029 NEUROD6Q96NK8 337 aa23.88■■□□□ 1.41
PTCD1-203ENST00000430029 DBNDD2Q9BQY9 259 aa23.88■■□□□ 1.41
PTCD1-203ENST00000430029 DBNLQ9UJU6 430 aaKnown RBP23.88■■□□□ 1.41
PTCD1-203ENST00000430029 ARAP2Q8WZ64 1704 aa23.87■■□□□ 1.41
PTCD1-203ENST00000430029 NFKBIEO00221 500 aa23.87■■□□□ 1.41
PTCD1-203ENST00000430029 IFIT1P09914 478 aaKnown RBP23.87■■□□□ 1.41
PTCD1-203ENST00000430029 SLC5A1P13866 664 aa23.87■■□□□ 1.41
PTCD1-203ENST00000430029 GRIPAP1Q4V328 841 aa23.87■■□□□ 1.41
PTCD1-203ENST00000430029 XAGE2Q96GT9 111 aa23.87■■□□□ 1.41
PTCD1-203ENST00000430029 ZBTB47Q9UFB7 747 aaPredicted RBP23.87■■□□□ 1.41
PTCD1-203ENST00000430029 SALL3Q9BXA9 1300 aa23.86■■□□□ 1.41
PTCD1-203ENST00000430029 PELP1Q8IZL8 1130 aaKnown RBP23.86■■□□□ 1.41
PTCD1-203ENST00000430029 PSMD1Q99460 953 aa23.86■■□□□ 1.41
PTCD1-203ENST00000430029 IFIT2P09913 472 aaKnown RBP23.85■■□□□ 1.41
PTCD1-203ENST00000430029 FKBP4Q02790 459 aaKnown RBP eCLIP23.85■■□□□ 1.41
PTCD1-203ENST00000430029 C15orf52Q6ZUT6 534 aaKnown RBP23.85■■□□□ 1.41
PTCD1-203ENST00000430029 MED23Q9ULK4 1368 aa23.84■■□□□ 1.41
PTCD1-203ENST00000430029 RIMBP2O15034 1052 aa23.83■■□□□ 1.41
PTCD1-203ENST00000430029 GYG1P46976 350 aa23.83■■□□□ 1.41
PTCD1-203ENST00000430029 FAM84BQ96KN1 310 aaPredicted RBP23.83■■□□□ 1.41
PTCD1-203ENST00000430029 BCAMP50895 628 aa23.82■■□□□ 1.4
PTCD1-203ENST00000430029 RASSF7Q02833 373 aa23.82■■□□□ 1.4
PTCD1-203ENST00000430029 FBXO33Q7Z6M2 555 aa23.82■■□□□ 1.4
PTCD1-203ENST00000430029 SUPT20HQ8NEM7 779 aa23.82■■□□□ 1.4
PTCD1-203ENST00000430029 EYA3Q99504 573 aa23.82■■□□□ 1.4
PTCD1-203ENST00000430029 TAOK3Q9H2K8 898 aa23.82■■□□□ 1.4
PTCD1-203ENST00000430029 LTBP3Q9NS15 1303 aa23.82■■□□□ 1.4
PTCD1-203ENST00000430029 YY1P25490 414 aa23.81■■□□□ 1.4
PTCD1-203ENST00000430029 PHKA1P46020 1223 aa23.81■■□□□ 1.4
PTCD1-203ENST00000430029 PRELPP51888 382 aa23.81■■□□□ 1.4
PTCD1-203ENST00000430029 WASHC4Q2M389 1173 aa23.81■■□□□ 1.4
PTCD1-203ENST00000430029 TSHZ3Q63HK5 1081 aa23.81■■□□□ 1.4
PTCD1-203ENST00000430029 CCDC102BQ68D86 513 aa23.81■■□□□ 1.4
PTCD1-203ENST00000430029 PLEKHM2Q8IWE5 1019 aa23.81■■□□□ 1.4
PTCD1-203ENST00000430029 ZNF277Q9NRM2 450 aaPredicted RBP23.81■■□□□ 1.4
PTCD1-203ENST00000430029 AOC3Q16853 763 aa23.8■■□□□ 1.4
PTCD1-203ENST00000430029 ARHGAP27Q6ZUM4 889 aa23.8■■□□□ 1.4
PTCD1-203ENST00000430029 ZC3H12CQ9C0D7 883 aaKnown RBP23.8■■□□□ 1.4
PTCD1-203ENST00000430029 MX1P20591 662 aa23.79■■□□□ 1.4
PTCD1-203ENST00000430029 KIAA2012Q0VF49 1180 aa23.79■■□□□ 1.4
PTCD1-203ENST00000430029 GPR162Q16538 588 aa23.79■■□□□ 1.4
PTCD1-203ENST00000430029 PPIP5K2O43314 1243 aa23.78■■□□□ 1.4
PTCD1-203ENST00000430029 HIBADHP31937 336 aaKnown RBP23.78■■□□□ 1.4
PTCD1-203ENST00000430029 PDE1AP54750 535 aa23.78■■□□□ 1.4
PTCD1-203ENST00000430029 CAVIN4Q5BKX8 364 aa23.78■■□□□ 1.4
PTCD1-203ENST00000430029 GORABQ5T7V8 394 aa23.78■■□□□ 1.4
PTCD1-203ENST00000430029 STAP2Q9UGK3 403 aa23.78■■□□□ 1.4
PTCD1-203ENST00000430029 COL4A5P29400 1685 aa23.78■■□□□ 1.4
PTCD1-203ENST00000430029 IARSP41252 1262 aaKnown RBP23.77■■□□□ 1.4
PTCD1-203ENST00000430029 DOK7Q18PE1 504 aa23.77■■□□□ 1.4
PTCD1-203ENST00000430029 CCDC158Q5M9N0 1113 aa23.77■■□□□ 1.4
PTCD1-203ENST00000430029 CD209Q9NNX6 404 aa23.77■■□□□ 1.4
PTCD1-203ENST00000430029 ECHDC1Q9NTX5 307 aa23.77■■□□□ 1.4
PTCD1-203ENST00000430029 GOLGB1Q14789 3259 aaKnown RBP23.76■■□□□ 1.39
PTCD1-203ENST00000430029 SCARF1Q14162 830 aa23.76■■□□□ 1.39
PTCD1-203ENST00000430029 TTC39AQ5SRH9 613 aa23.76■■□□□ 1.39
PTCD1-203ENST00000430029 PI4K2BQ8TCG2 481 aa23.76■■□□□ 1.39
PTCD1-203ENST00000430029 VPS33BQ9H267 617 aa23.76■■□□□ 1.39
PTCD1-203ENST00000430029 IQSEC3Q9UPP2 1182 aaPredicted RBP23.76■■□□□ 1.39
PTCD1-203ENST00000430029 TTC41PQ6P2S7 1318 aa23.76■■□□□ 1.39
PTCD1-203ENST00000430029 ARID4AP29374 1257 aaPredicted RBP23.75■■□□□ 1.39
PTCD1-203ENST00000430029 RGS3P49796 1198 aa23.75■■□□□ 1.39
PTCD1-203ENST00000430029 ZNF804AQ7Z570 1209 aa23.75■■□□□ 1.39
PTCD1-203ENST00000430029 VPS37DQ86XT2 251 aa23.75■■□□□ 1.39
PTCD1-203ENST00000430029 ZNF512BQ96KM6 892 aaPredicted RBP23.75■■□□□ 1.39
PTCD1-203ENST00000430029 COA1Q9GZY4 146 aa23.75■■□□□ 1.39
PTCD1-203ENST00000430029 OSBPL3Q9H4L5 887 aa23.75■■□□□ 1.39
PTCD1-203ENST00000430029 CHD4Q14839 1912 aa23.74■■□□□ 1.39
PTCD1-203ENST00000430029 ATP5JP18859 108 aa23.74■■□□□ 1.39
PTCD1-203ENST00000430029 LARGE2Q8N3Y3 721 aa23.74■■□□□ 1.39
PTCD1-203ENST00000430029 TDRD7Q8NHU6 1098 aaKnown RBP23.74■■□□□ 1.39
PTCD1-203ENST00000430029 DBNDD1Q9H9R9 158 aa23.74■■□□□ 1.39
PTCD1-203ENST00000430029 COL1A1P02452 1464 aaPredicted RBP23.74■■□□□ 1.39
PTCD1-203ENST00000430029 SBF1O95248 1867 aa23.73■■□□□ 1.39
PTCD1-203ENST00000430029 CCDC88AQ3V6T2 1871 aa23.73■■□□□ 1.39
PTCD1-203ENST00000430029 AKAP11Q9UKA4 1901 aa23.73■■□□□ 1.39
PTCD1-203ENST00000430029 IL1R1P14778 569 aa23.73■■□□□ 1.39
PTCD1-203ENST00000430029 MCAMP43121 646 aa23.73■■□□□ 1.39
PTCD1-203ENST00000430029 RASGRF1Q13972 1273 aa23.73■■□□□ 1.39
PTCD1-203ENST00000430029 GPATCH3Q96I76 525 aa23.73■■□□□ 1.39
PTCD1-203ENST00000430029 BOLA2Q9H3K6 86 aa23.73■■□□□ 1.39
PTCD1-203ENST00000430029 ZBTB22O15209 634 aa23.72■■□□□ 1.39
PTCD1-203ENST00000430029 ECE2O60344 883 aa23.72■■□□□ 1.39
PTCD1-203ENST00000430029 GRIN3BO60391 1043 aa23.72■■□□□ 1.39
PTCD1-203ENST00000430029 UQCRFS1P1P0C7P4 283 aa23.72■■□□□ 1.39
PTCD1-203ENST00000430029 PI16Q6UXB8 463 aa23.72■■□□□ 1.39
PTCD1-203ENST00000430029 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.72■■□□□ 1.39
PTCD1-203ENST00000430029 GNL3LQ9NVN8 582 aaKnown RBP23.72■■□□□ 1.39
PTCD1-203ENST00000430029 HMG20BQ9P0W2 317 aa23.72■■□□□ 1.39
PTCD1-203ENST00000430029 AOX1Q06278 1338 aa23.72■■□□□ 1.39
PTCD1-203ENST00000430029 YDJCA8MPS7 323 aa23.71■■□□□ 1.39
PTCD1-203ENST00000430029 SNRKQ9NRH2 765 aa23.71■■□□□ 1.39
PTCD1-203ENST00000430029 NDUFB9Q9Y6M9 179 aa23.71■■□□□ 1.39
PTCD1-203ENST00000430029 SCN9AQ15858 1988 aa23.71■■□□□ 1.39
PTCD1-203ENST00000430029 G3V3G9 751 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms