RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 PI4KAP1Q8N8J0 262 aa12.85□□□□□ -0.35
SEMA4D-209ENST00000429836 KIAA1468Q9P260 1216 aa12.85□□□□□ -0.35
SEMA4D-209ENST00000429836 PCDHA7Q9UN72 937 aa12.85□□□□□ -0.35
SEMA4D-209ENST00000429836 GNG11P61952 73 aa12.85□□□□□ -0.35
SEMA4D-209ENST00000429836 NCAPHQ15003 741 aa12.85□□□□□ -0.35
SEMA4D-209ENST00000429836 LONRF2Q1L5Z9 754 aa12.85□□□□□ -0.35
SEMA4D-209ENST00000429836 PEAK1Q9H792 1746 aa12.85□□□□□ -0.35
SEMA4D-209ENST00000429836 TUBB4AP04350 444 aa12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 MCM6Q14566 821 aa12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 NUTM2GQ5VZR2 741 aa12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 MRPS27Q92552 414 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 PDE11AQ9HCR9 933 aa12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 CCT2P78371 535 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 BEND3Q5T5X7 828 aa12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 ILDR1Q86SU0 546 aaPredicted RBP12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 EAF2Q96CJ1 260 aaPredicted RBP12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 DRC1Q96MC2 740 aa12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 NEK1Q96PY6 1258 aa12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 ALDH8A1Q9H2A2 487 aaPredicted RBP12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 PLEKHG2Q9H7P9 1386 aa12.84□□□□□ -0.35
SEMA4D-209ENST00000429836 PXDNLA1KZ92 1463 aa12.83□□□□□ -0.35
SEMA4D-209ENST00000429836 TMEM232C9JQI7 657 aa12.83□□□□□ -0.35
SEMA4D-209ENST00000429836 N4BP1O75113 896 aaKnown RBP12.83□□□□□ -0.35
SEMA4D-209ENST00000429836 LEKR1Q6ZMV7 388 aa12.83□□□□□ -0.35
SEMA4D-209ENST00000429836 CCDC129Q6ZRS4 1044 aa12.83□□□□□ -0.35
SEMA4D-209ENST00000429836 NCOA5Q9HCD5 579 aaKnown RBP12.83□□□□□ -0.35
SEMA4D-209ENST00000429836 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 PTPDC1A2A3K4 754 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 CTDNEP1O95476 244 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 NBPF6Q5VWK0 638 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 RSRC2Q7L4I2 434 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 NSUN7Q8NE18 718 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 IL17REQ8NFR9 667 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 NBPF4Q96M43 638 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 EYA1Q99502 592 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 PLEKHA4Q9H4M7 779 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 PPP2R2CQ9Y2T4 447 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 NDUFB9Q9Y6M9 179 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 CCP110O43303 1012 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 MAP3K9P80192 1104 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 TTC31Q49AM3 519 aaPredicted RBP12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 DNAAF4Q8WXU2 420 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 SECISBP2LQ93073 1101 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 DHX58Q96C10 678 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 ZNF396Q96N95 335 aaPredicted RBP12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 YY1AP1Q9H869 796 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 JRKLQ9Y4A0 524 aa12.83□□□□□ -0.36
SEMA4D-209ENST00000429836 MED23Q9ULK4 1368 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 C3P01024 1663 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 A0A1B0GUL7 405 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 TAF5LO75529 589 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 PSME1Q06323 249 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 TSGA10IPQ3SY00 556 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 WWC2Q6AWC2 1192 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 GOLGA6L1Q8N7Z2 621 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 SIRT1Q96EB6 747 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 SUGCTQ9HAC7 445 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 PSD3Q9NYI0 1048 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 CHPF2Q9P2E5 772 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 MRFAP1Q9Y605 127 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 MON2Q7Z3U7 1717 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 HIP1O00291 1037 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 SERPINC1P01008 464 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 UBASH3AP57075 661 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 APOBRQ0VD83 1088 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 CFAP100Q494V2 611 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 HSP90AA4PQ58FG1 418 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 OTUD7BQ6GQQ9 843 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 ERC1Q8IUD2 1116 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 TEX2Q8IWB9 1127 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 HSD3B7Q9H2F3 369 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 GEMIN8Q9NWZ8 242 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 NEDD4P46934 1319 aa12.82□□□□□ -0.36
SEMA4D-209ENST00000429836 COL15A1P39059 1388 aa12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 RGPD1P0DJD0 1748 aa12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 SASH1O94885 1247 aa12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 SLC3A2P08195 630 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 NAA16Q6N069 864 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 IQUBQ8NA54 791 aa12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 EIF3CLB5ME19 914 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 KARSQ15046 597 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 CTR9Q6PD62 1173 aa12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 EIF3CQ99613 913 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 HMG20BQ9P0W2 317 aa12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 FAN1Q9Y2M0 1017 aa12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 CLIC4Q9Y696 253 aa12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 ITSN1Q15811 1721 aa12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 CEP170BQ9Y4F5 1589 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-209ENST00000429836 MYH15Q9Y2K3 1946 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 PHACTR2O75167 634 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 NLRP12P59046 1061 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 SF3A1Q15459 793 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 TOGARAM2Q6ZUX3 1019 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 RABGGTAQ92696 567 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 MPHOSPH8Q99549 860 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 BPIFA3Q9BQP9 254 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 IRX2Q9BZI1 471 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms