RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 EPS15P42566 896 aa21.82■■□□□ 1.08
CTSD-203ENST00000429746 CNNM1Q9NRU3 951 aa21.82■■□□□ 1.08
CTSD-203ENST00000429746 GMPSP49915 693 aaPredicted RBP21.81■■□□□ 1.08
CTSD-203ENST00000429746 YTHDC1Q96MU7 727 aaKnown RBP21.81■■□□□ 1.08
CTSD-203ENST00000429746 GPRC5DQ9NZD1 345 aa21.81■■□□□ 1.08
CTSD-203ENST00000429746 VIL1P09327 827 aaKnown RBP21.8■■□□□ 1.08
CTSD-203ENST00000429746 TAF7LQ5H9L4 462 aa21.8■■□□□ 1.08
CTSD-203ENST00000429746 PA2G4Q9UQ80 394 aaKnown RBP21.8■■□□□ 1.08
CTSD-203ENST00000429746 ZBTB12Q9Y330 459 aaPredicted RBP21.8■■□□□ 1.08
CTSD-203ENST00000429746 PNMA6EA0A0J9YXQ4 647 aa21.79■■□□□ 1.08
CTSD-203ENST00000429746 EYA2O00167 538 aa21.79■■□□□ 1.08
CTSD-203ENST00000429746 LMOD1P29536 600 aaPredicted RBP21.79■■□□□ 1.08
CTSD-203ENST00000429746 HTRA3P83110 453 aa21.79■■□□□ 1.08
CTSD-203ENST00000429746 C20orf194Q5TEA3 1177 aa21.79■■□□□ 1.08
CTSD-203ENST00000429746 PODNQ7Z5L7 613 aa21.79■■□□□ 1.08
CTSD-203ENST00000429746 GMLQ99445 158 aa21.79■■□□□ 1.08
CTSD-203ENST00000429746 COPRSQ9NQ92 184 aa21.79■■□□□ 1.08
CTSD-203ENST00000429746 CREBZFQ9NS37 354 aa21.79■■□□□ 1.08
CTSD-203ENST00000429746 MROH5Q6ZUA9 1318 aa21.79■■□□□ 1.08
CTSD-203ENST00000429746 GNAI2P04899 355 aa21.78■■□□□ 1.08
CTSD-203ENST00000429746 FGFR2P21802 821 aa21.78■■□□□ 1.08
CTSD-203ENST00000429746 TNIP1Q15025 636 aa21.78■■□□□ 1.08
CTSD-203ENST00000429746 FTSJ3Q8IY81 847 aaKnown RBP21.78■■□□□ 1.08
CTSD-203ENST00000429746 COA1Q9GZY4 146 aa21.78■■□□□ 1.08
CTSD-203ENST00000429746 PASKQ96RG2 1323 aa21.78■■□□□ 1.08
CTSD-203ENST00000429746 UBE4AQ14139 1066 aa21.77■■□□□ 1.08
CTSD-203ENST00000429746 ITPRIPQ8IWB1 547 aa21.77■■□□□ 1.08
CTSD-203ENST00000429746 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.77■■□□□ 1.08
CTSD-203ENST00000429746 ARAP2Q8WZ64 1704 aa21.77■■□□□ 1.08
CTSD-203ENST00000429746 CIAO1O76071 339 aa21.76■■□□□ 1.07
CTSD-203ENST00000429746 PDE8BO95263 885 aa21.76■■□□□ 1.07
CTSD-203ENST00000429746 HIRAP54198 1017 aaPredicted RBP21.76■■□□□ 1.07
CTSD-203ENST00000429746 EAPPQ56P03 285 aaPredicted RBP21.76■■□□□ 1.07
CTSD-203ENST00000429746 DACT2Q5SW24 774 aa21.76■■□□□ 1.07
CTSD-203ENST00000429746 DPF2Q92785 391 aa21.76■■□□□ 1.07
CTSD-203ENST00000429746 C1orf115Q9H7X2 142 aa21.76■■□□□ 1.07
CTSD-203ENST00000429746 CD209Q9NNX6 404 aa21.76■■□□□ 1.07
CTSD-203ENST00000429746 FBXO3Q9UK99 471 aa21.76■■□□□ 1.07
CTSD-203ENST00000429746 ITGBL1O95965 494 aaPredicted RBP21.75■■□□□ 1.07
CTSD-203ENST00000429746 EGFRP00533 1210 aa21.75■■□□□ 1.07
CTSD-203ENST00000429746 IL1R1P14778 569 aa21.75■■□□□ 1.07
CTSD-203ENST00000429746 POLA2Q14181 598 aa21.75■■□□□ 1.07
CTSD-203ENST00000429746 FAM84BQ96KN1 310 aaPredicted RBP21.75■■□□□ 1.07
CTSD-203ENST00000429746 MXD3Q9BW11 206 aa21.75■■□□□ 1.07
CTSD-203ENST00000429746 HDAC5Q9UQL6 1122 aa21.75■■□□□ 1.07
CTSD-203ENST00000429746 CLEC11AQ9Y240 323 aa21.75■■□□□ 1.07
CTSD-203ENST00000429746 SRGAP3O43295 1099 aa21.74■■□□□ 1.07
CTSD-203ENST00000429746 MVPQ14764 893 aaKnown RBP21.74■■□□□ 1.07
CTSD-203ENST00000429746 METTL24Q5JXM2 366 aa21.74■■□□□ 1.07
CTSD-203ENST00000429746 RSBN1LQ6PCB5 846 aaPredicted RBP21.74■■□□□ 1.07
CTSD-203ENST00000429746 USP50Q70EL3 339 aaPredicted RBP21.74■■□□□ 1.07
CTSD-203ENST00000429746 TRPM4Q8TD43 1214 aa21.74■■□□□ 1.07
CTSD-203ENST00000429746 SIL1Q9H173 461 aa21.74■■□□□ 1.07
CTSD-203ENST00000429746 USP17L3A6NCW0 530 aa21.73■■□□□ 1.07
CTSD-203ENST00000429746 USP17L4A6NCW7 530 aa21.73■■□□□ 1.07
CTSD-203ENST00000429746 RPS12P25398 132 aaKnown RBP21.73■■□□□ 1.07
CTSD-203ENST00000429746 KCNJ4P48050 445 aa21.73■■□□□ 1.07
CTSD-203ENST00000429746 USP17L1Q7RTZ2 530 aa21.73■■□□□ 1.07
CTSD-203ENST00000429746 SSH3Q8TE77 659 aa21.73■■□□□ 1.07
CTSD-203ENST00000429746 CNOT7Q9UIV1 285 aaKnown RBP21.73■■□□□ 1.07
CTSD-203ENST00000429746 GYG1P46976 350 aa21.72■■□□□ 1.07
CTSD-203ENST00000429746 STRIP1Q5VSL9 837 aa21.72■■□□□ 1.07
CTSD-203ENST00000429746 FBXO33Q7Z6M2 555 aa21.72■■□□□ 1.07
CTSD-203ENST00000429746 MICALL2Q8IY33 904 aa21.72■■□□□ 1.07
CTSD-203ENST00000429746 CNTROBQ8N137 903 aa21.72■■□□□ 1.07
CTSD-203ENST00000429746 CERS5Q8N5B7 392 aa21.72■■□□□ 1.07
CTSD-203ENST00000429746 ADARB2Q9NS39 739 aaKnown RBP21.72■■□□□ 1.07
CTSD-203ENST00000429746 COG6Q9Y2V7 657 aa21.72■■□□□ 1.07
CTSD-203ENST00000429746 ZNF280AP59817 542 aaPredicted RBP21.71■■□□□ 1.07
CTSD-203ENST00000429746 ATP8B2P98198 1209 aa21.71■■□□□ 1.07
CTSD-203ENST00000429746 AGBL3Q8NEM8 1001 aa21.71■■□□□ 1.07
CTSD-203ENST00000429746 TDRD7Q8NHU6 1098 aaKnown RBP21.71■■□□□ 1.07
CTSD-203ENST00000429746 ZBTB40Q9NUA8 1239 aa21.71■■□□□ 1.07
CTSD-203ENST00000429746 PGAP2Q9UHJ9 254 aa21.71■■□□□ 1.07
CTSD-203ENST00000429746 TMEM88BA6NKF7 163 aa21.7■■□□□ 1.06
CTSD-203ENST00000429746 IL15P40933 162 aaPredicted RBP21.7■■□□□ 1.06
CTSD-203ENST00000429746 PDE3AQ14432 1141 aa21.7■■□□□ 1.06
CTSD-203ENST00000429746 CEP85Q6P2H3 762 aa21.7■■□□□ 1.06
CTSD-203ENST00000429746 COL1A1P02452 1464 aaPredicted RBP21.7■■□□□ 1.06
CTSD-203ENST00000429746 POLR2AP24928 1970 aaKnown RBP21.69■■□□□ 1.06
CTSD-203ENST00000429746 MS4A1P11836 297 aa21.69■■□□□ 1.06
CTSD-203ENST00000429746 PUM3Q15397 648 aaKnown RBP21.69■■□□□ 1.06
CTSD-203ENST00000429746 SAMD7Q7Z3H4 446 aa21.69■■□□□ 1.06
CTSD-203ENST00000429746 G3V3G9 751 aa21.68■■□□□ 1.06
CTSD-203ENST00000429746 GTF2IP78347 998 aa21.68■■□□□ 1.06
CTSD-203ENST00000429746 DCAF8Q5TAQ9 597 aa21.68■■□□□ 1.06
CTSD-203ENST00000429746 ZNF804AQ7Z570 1209 aa21.68■■□□□ 1.06
CTSD-203ENST00000429746 FAM205AQ6ZU69 1335 aa21.68■■□□□ 1.06
CTSD-203ENST00000429746 TRPM7Q96QT4 1865 aa21.68■■□□□ 1.06
CTSD-203ENST00000429746 MYH13Q9UKX3 1938 aa21.67■■□□□ 1.06
CTSD-203ENST00000429746 SASH1O94885 1247 aa21.67■■□□□ 1.06
CTSD-203ENST00000429746 HIBADHP31937 336 aaKnown RBP21.67■■□□□ 1.06
CTSD-203ENST00000429746 MAP1SQ66K74 1059 aaPredicted RBP21.67■■□□□ 1.06
CTSD-203ENST00000429746 TTLL5Q6EMB2 1281 aa21.67■■□□□ 1.06
CTSD-203ENST00000429746 SIRT2Q8IXJ6 389 aa21.67■■□□□ 1.06
CTSD-203ENST00000429746 DDX19BQ9UMR2 479 aa21.67■■□□□ 1.06
CTSD-203ENST00000429746 BCAMP50895 628 aa21.66■■□□□ 1.06
CTSD-203ENST00000429746 IFFO2Q5TF58 517 aa21.66■■□□□ 1.06
CTSD-203ENST00000429746 ZC3H15Q8WU90 426 aaKnown RBP21.66■■□□□ 1.06
CTSD-203ENST00000429746 LPIN2Q92539 896 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms