RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 CCDC85AQ96PX6 553 aaPredicted RBP15.19■□□□□ 0.02
ALMS1P1-201ENST00000428767 ECM29Q5VYK3 1845 aa15.19■□□□□ 0.02
ALMS1P1-201ENST00000428767 A0A0C4DFX4 3053 aa15.18■□□□□ 0.02
ALMS1P1-201ENST00000428767 MANSC4A6NHS7 340 aaPredicted RBP15.18■□□□□ 0.02
ALMS1P1-201ENST00000428767 ANKRD13DQ6ZTN6 518 aa15.18■□□□□ 0.02
ALMS1P1-201ENST00000428767 ARMC5Q96C12 935 aa15.18■□□□□ 0.02
ALMS1P1-201ENST00000428767 ERO1AQ96HE7 468 aa15.18■□□□□ 0.02
ALMS1P1-201ENST00000428767 TMEM106CQ9BVX2 250 aa15.18■□□□□ 0.02
ALMS1P1-201ENST00000428767 XDHP47989 1333 aa15.17■□□□□ 0.02
ALMS1P1-201ENST00000428767 ZSWIM8A7E2V4 1837 aa15.17■□□□□ 0.02
ALMS1P1-201ENST00000428767 OTOFQ9HC10 1997 aa15.17■□□□□ 0.02
ALMS1P1-201ENST00000428767 WTIPA6NIX2 430 aaPredicted RBP15.17■□□□□ 0.02
ALMS1P1-201ENST00000428767 DLL1O00548 723 aa15.17■□□□□ 0.02
ALMS1P1-201ENST00000428767 LDLRAD1Q5T700 205 aa15.17■□□□□ 0.02
ALMS1P1-201ENST00000428767 CLMNQ96JQ2 1002 aa15.17■□□□□ 0.02
ALMS1P1-201ENST00000428767 EFCC1Q9HA90 598 aa15.17■□□□□ 0.02
ALMS1P1-201ENST00000428767 MYH3P11055 1940 aa15.17■□□□□ 0.02
ALMS1P1-201ENST00000428767 H0YGN5 161 aa15.16■□□□□ 0.02
ALMS1P1-201ENST00000428767 MYCP01106 439 aaPredicted RBP15.16■□□□□ 0.02
ALMS1P1-201ENST00000428767 CAP1Q01518 475 aa15.16■□□□□ 0.02
ALMS1P1-201ENST00000428767 CRHR2Q13324 411 aa15.16■□□□□ 0.02
ALMS1P1-201ENST00000428767 DACT2Q5SW24 774 aa15.16■□□□□ 0.02
ALMS1P1-201ENST00000428767 PODNQ7Z5L7 613 aa15.16■□□□□ 0.02
ALMS1P1-201ENST00000428767 APOBEC3FQ8IUX4 373 aaKnown RBP15.16■□□□□ 0.02
ALMS1P1-201ENST00000428767 OGFOD1Q8N543 542 aa15.16■□□□□ 0.02
ALMS1P1-201ENST00000428767 SLC10A4Q96EP9 437 aa15.16■□□□□ 0.02
ALMS1P1-201ENST00000428767 WNK4Q96J92 1243 aa15.16■□□□□ 0.02
ALMS1P1-201ENST00000428767 RIPK4P57078 832 aa15.15■□□□□ 0.02
ALMS1P1-201ENST00000428767 HDGFL1Q5TGJ6 251 aa15.15■□□□□ 0.02
ALMS1P1-201ENST00000428767 JARID2Q92833 1246 aaPredicted RBP15.15■□□□□ 0.02
ALMS1P1-201ENST00000428767 SSC5DA1L4H1 1573 aa15.15■□□□□ 0.02
ALMS1P1-201ENST00000428767 ATP2B4P23634 1241 aa15.14■□□□□ 0.01
ALMS1P1-201ENST00000428767 INHBEP58166 350 aa15.14■□□□□ 0.01
ALMS1P1-201ENST00000428767 CCDC152Q4G0S7 254 aa15.14■□□□□ 0.01
ALMS1P1-201ENST00000428767 CHRDL2Q6WN34 429 aa15.14■□□□□ 0.01
ALMS1P1-201ENST00000428767 ZNF333Q96JL9 665 aa15.14■□□□□ 0.01
ALMS1P1-201ENST00000428767 MED23Q9ULK4 1368 aa15.13■□□□□ 0.01
ALMS1P1-201ENST00000428767 SP3Q02447 781 aa15.13■□□□□ 0.01
ALMS1P1-201ENST00000428767 SLC4A8Q2Y0W8 1093 aa15.13■□□□□ 0.01
ALMS1P1-201ENST00000428767 SLC9C1Q4G0N8 1177 aa15.13■□□□□ 0.01
ALMS1P1-201ENST00000428767 KIAA0825Q8IV33 1275 aa15.13■□□□□ 0.01
ALMS1P1-201ENST00000428767 ANKRD18AQ8IVF6 992 aa15.13■□□□□ 0.01
ALMS1P1-201ENST00000428767 OTUD5Q96G74 571 aa15.13■□□□□ 0.01
ALMS1P1-201ENST00000428767 BABAM1Q9NWV8 329 aa15.13■□□□□ 0.01
ALMS1P1-201ENST00000428767 LAS1LQ9Y4W2 734 aaKnown RBP15.13■□□□□ 0.01
ALMS1P1-201ENST00000428767 PTCH2Q9Y6C5 1203 aa15.13■□□□□ 0.01
ALMS1P1-201ENST00000428767 MYO3BQ8WXR4 1341 aa15.13■□□□□ 0.01
ALMS1P1-201ENST00000428767 ZBTB48P10074 688 aaPredicted RBP15.12■□□□□ 0.01
ALMS1P1-201ENST00000428767 ZBTB38Q8NAP3 1195 aaPredicted RBP15.12■□□□□ 0.01
ALMS1P1-201ENST00000428767 SLC17A8Q8NDX2 589 aa15.12■□□□□ 0.01
ALMS1P1-201ENST00000428767 PNNQ9H307 717 aaKnown RBP15.12■□□□□ 0.01
ALMS1P1-201ENST00000428767 COL1A1P02452 1464 aaPredicted RBP15.12■□□□□ 0.01
ALMS1P1-201ENST00000428767 GJA5P36382 358 aa15.11■□□□□ 0.01
ALMS1P1-201ENST00000428767 MYD88Q99836 296 aa15.11■□□□□ 0.01
ALMS1P1-201ENST00000428767 PDE8AO60658 829 aa15.1■□□□□ 0.01
ALMS1P1-201ENST00000428767 TRIM28Q13263 835 aaKnown RBP15.1■□□□□ 0.01
ALMS1P1-201ENST00000428767 STRIP1Q5VSL9 837 aa15.1■□□□□ 0.01
ALMS1P1-201ENST00000428767 RIC3Q7Z5B4 369 aa15.1■□□□□ 0.01
ALMS1P1-201ENST00000428767 DEFB129Q9H1M3 183 aa15.1■□□□□ 0.01
ALMS1P1-201ENST00000428767 RBM27Q9P2N5 1060 aaKnown RBP15.1■□□□□ 0.01
ALMS1P1-201ENST00000428767 DBF4Q9UBU7 674 aaPredicted RBP15.1■□□□□ 0.01
ALMS1P1-201ENST00000428767 CUL9Q8IWT3 2517 aa15.1■□□□□ 0.01
ALMS1P1-201ENST00000428767 HSP90B1P14625 803 aaKnown RBP15.09■□□□□ 0.01
ALMS1P1-201ENST00000428767 MAP3K11Q16584 847 aa15.09■□□□□ 0.01
ALMS1P1-201ENST00000428767 OTUD7BQ6GQQ9 843 aa15.09■□□□□ 0.01
ALMS1P1-201ENST00000428767 TXNRD3Q86VQ6 643 aa15.09■□□□□ 0.01
ALMS1P1-201ENST00000428767 ZBED3Q96IU2 234 aaPredicted RBP15.09■□□□□ 0.01
ALMS1P1-201ENST00000428767 PTPN18Q99952 460 aa15.09■□□□□ 0.01
ALMS1P1-201ENST00000428767 PPP1R12BO60237 982 aaPredicted RBP15.08■□□□□ 0
ALMS1P1-201ENST00000428767 PCCAP05165 728 aaPredicted RBP15.08■□□□□ 0
ALMS1P1-201ENST00000428767 TMPOP42166 694 aaKnown RBP15.08■□□□□ 0
ALMS1P1-201ENST00000428767 CCT4P50991 539 aaKnown RBP15.08■□□□□ 0
ALMS1P1-201ENST00000428767 GOLGA2Q08379 1002 aa15.08■□□□□ 0
ALMS1P1-201ENST00000428767 LMOD3Q0VAK6 560 aa15.08■□□□□ 0
ALMS1P1-201ENST00000428767 NEUROD2Q15784 382 aa15.08■□□□□ 0
ALMS1P1-201ENST00000428767 TTLL5Q6EMB2 1281 aa15.08■□□□□ 0
ALMS1P1-201ENST00000428767 NBPF11Q86T75 865 aa15.08■□□□□ 0
ALMS1P1-201ENST00000428767 HYPKQ9NX55 129 aa15.08■□□□□ 0
ALMS1P1-201ENST00000428767 PCDHAC2Q9Y5I4 1007 aa15.08■□□□□ 0
ALMS1P1-201ENST00000428767 LAMA3Q16787 3333 aa15.08■□□□□ 0
ALMS1P1-201ENST00000428767 CLRN2A0PK11 232 aa15.07■□□□□ 0
ALMS1P1-201ENST00000428767 KLRK1P26718 216 aa15.07■□□□□ 0
ALMS1P1-201ENST00000428767 SH3TC2Q8TF17 1288 aa15.07■□□□□ 0
ALMS1P1-201ENST00000428767 CDC5LQ99459 802 aaKnown RBP15.07■□□□□ 0
ALMS1P1-201ENST00000428767 COA1Q9GZY4 146 aa15.07■□□□□ 0
ALMS1P1-201ENST00000428767 MINPP1Q9UNW1 487 aa15.07■□□□□ 0
ALMS1P1-201ENST00000428767 CHL1O00533 1208 aa15.06■□□□□ 0
ALMS1P1-201ENST00000428767 GTF2IP78347 998 aa15.06■□□□□ 0
ALMS1P1-201ENST00000428767 DLGAP5Q15398 846 aa15.06■□□□□ 0
ALMS1P1-201ENST00000428767 NBPF12Q5TAG4 269 aaPredicted RBP15.06■□□□□ 0
ALMS1P1-201ENST00000428767 DPF3Q92784 378 aa15.06■□□□□ 0
ALMS1P1-201ENST00000428767 PHAXQ9H814 394 aaKnown RBP15.06■□□□□ 0
ALMS1P1-201ENST00000428767 ELP3Q9H9T3 547 aa15.06■□□□□ 0
ALMS1P1-201ENST00000428767 VEZTQ9HBM0 779 aa15.06■□□□□ 0
ALMS1P1-201ENST00000428767 CWC25Q9NXE8 425 aaPredicted RBP15.06■□□□□ 0
ALMS1P1-201ENST00000428767 F8W031 263 aaPredicted RBP15.05■□□□□ -0
ALMS1P1-201ENST00000428767 IREB2P48200 963 aaKnown RBP15.05■□□□□ -0
ALMS1P1-201ENST00000428767 CTSWP56202 376 aa15.05■□□□□ -0
ALMS1P1-201ENST00000428767 TAF1CQ15572 869 aaPredicted RBP15.05■□□□□ -0
ALMS1P1-201ENST00000428767 GREM2Q9H772 168 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms