RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 VPS37DQ86XT2 251 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 PLEKHM2Q8IWE5 1019 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 PELP1Q8IZL8 1130 aaKnown RBP9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 TBC1D16Q8TBP0 767 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 XAGE2Q96GT9 111 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 GPR101Q96P66 508 aaPredicted RBP9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 SYT17Q9BSW7 474 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 PODXL2Q9NZ53 605 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 LEMD3Q9Y2U8 911 aa9.68□□□□□ -0.86
HMGA1P4-201ENST00000428643 AOX1Q06278 1338 aa9.67□□□□□ -0.86
HMGA1P4-201ENST00000428643 TTC41PQ6P2S7 1318 aa9.67□□□□□ -0.86
HMGA1P4-201ENST00000428643 SALL3Q9BXA9 1300 aa9.67□□□□□ -0.86
HMGA1P4-201ENST00000428643 WTIPA6NIX2 430 aaPredicted RBP9.67□□□□□ -0.86
HMGA1P4-201ENST00000428643 ERC2O15083 957 aa9.67□□□□□ -0.86
HMGA1P4-201ENST00000428643 GYG1P46976 350 aa9.67□□□□□ -0.86
HMGA1P4-201ENST00000428643 CAVIN4Q5BKX8 364 aa9.67□□□□□ -0.86
HMGA1P4-201ENST00000428643 CCDC158Q5M9N0 1113 aa9.67□□□□□ -0.86
HMGA1P4-201ENST00000428643 RTKN2Q8IZC4 609 aa9.67□□□□□ -0.86
HMGA1P4-201ENST00000428643 C7orf43Q8WVR3 580 aa9.67□□□□□ -0.86
HMGA1P4-201ENST00000428643 DUOX1Q9NRD9 1551 aa9.67□□□□□ -0.86
HMGA1P4-201ENST00000428643 TAF1P21675 1872 aa9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 MED23Q9ULK4 1368 aa9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 GLRX3O76003 335 aaKnown RBP9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 UQCRFS1P1P0C7P4 283 aa9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 PHKA1P46020 1223 aa9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 GRIPAP1Q4V328 841 aa9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 CCDC102BQ68D86 513 aa9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 ZNF804AQ7Z570 1209 aa9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 SUPT20HQ8NEM7 779 aa9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 EYA3Q99504 573 aa9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 ZC3H12CQ9C0D7 883 aaKnown RBP9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 GNL3LQ9NVN8 582 aaKnown RBP9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 STAP2Q9UGK3 403 aa9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 POLLQ9UGP5 575 aa9.66□□□□□ -0.86
HMGA1P4-201ENST00000428643 G3V3G9 751 aa9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 RIMBP2O15034 1052 aa9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 FRAT2O75474 233 aaPredicted RBP9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 ATP5JP18859 108 aa9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 HIBADHP31937 336 aaKnown RBP9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 BCAMP50895 628 aa9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 FKBP4Q02790 459 aaKnown RBP eCLIP9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 WASHC4Q2M389 1173 aa9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 TTC22Q5TAA0 569 aa9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 DCAF8Q5TAQ9 597 aa9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 PI4K2BQ8TCG2 481 aa9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 DNAJC2Q99543 621 aaKnown RBP9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 RTFDC1Q9BY42 306 aaPredicted RBP9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 TAOK3Q9H2K8 898 aa9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 SLX4Q8IY92 1834 aa9.65□□□□□ -0.86
HMGA1P4-201ENST00000428643 LTBP1Q14766 1721 aa9.65□□□□□ -0.87
HMGA1P4-201ENST00000428643 SNED1Q8TER0 1413 aa9.65□□□□□ -0.87
HMGA1P4-201ENST00000428643 TRIM6-TRIM34B2RNG4 842 aa9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 PPIP5K2O43314 1243 aa9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 MAP4K4O95819 1239 aaPredicted RBP9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 RASGRF1Q13972 1273 aa9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 C15orf52Q6ZUT6 534 aaKnown RBP9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 TXNRD3Q86VQ6 643 aa9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 FAM84BQ96KN1 310 aaPredicted RBP9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 PSMD1Q99460 953 aa9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 BOLA2Q9H3K6 86 aa9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 OSBPL3Q9H4L5 887 aa9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 SNRKQ9NRH2 765 aa9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 ZNF277Q9NRM2 450 aaPredicted RBP9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 IQSEC3Q9UPP2 1182 aaPredicted RBP9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 A0A1B0GUL6 1792 aa9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 ARAP2Q8WZ64 1704 aa9.64□□□□□ -0.87
HMGA1P4-201ENST00000428643 IRS2Q9Y4H2 1338 aa9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 GSPT1P15170 499 aaKnown RBP9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 ARID4AP29374 1257 aaPredicted RBP9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 CHAF1AQ13111 956 aaPredicted RBP9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 SCARF1Q14162 830 aa9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 AOC3Q16853 763 aa9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 DOK7Q18PE1 504 aa9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 BMP2KLQ5H9B9 411 aa9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 PI16Q6UXB8 463 aa9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 FBXO33Q7Z6M2 555 aa9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 HAUS7Q99871 368 aa9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 NDUFB9Q9Y6M9 179 aa9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 CACNA1SQ13698 1873 aa9.63□□□□□ -0.87
HMGA1P4-201ENST00000428643 COL1A1P02452 1464 aaPredicted RBP9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 NFKBIEO00221 500 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 GOLIM4O00461 696 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 SEMA3EO15041 775 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 MCAMP43121 646 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 ZAP70P43403 619 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 RASSF7Q02833 373 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 KIAA2012Q0VF49 1180 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 ARHGAP27Q6ZUM4 889 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 NIM1KQ8IY84 436 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 CNTROBQ8N137 903 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 LARGE2Q8N3Y3 721 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 SPATA5Q8NB90 893 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 FBXW7Q969H0 707 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 RILPL2Q969X0 211 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 ZNF512BQ96KM6 892 aaPredicted RBP9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 COA1Q9GZY4 146 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 DBNDD1Q9H9R9 158 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 CD209Q9NNX6 404 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 PAG1Q9NWQ8 432 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms