RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 MPHOSPH8Q99549 860 aa20.56■□□□□ 0.88
PRDM5-203ENST00000428209 NTSR2O95665 410 aa20.56■□□□□ 0.88
PRDM5-203ENST00000428209 ZSCAN22P10073 491 aaPredicted RBP20.56■□□□□ 0.88
PRDM5-203ENST00000428209 DTNBO60941 627 aa20.55■□□□□ 0.88
PRDM5-203ENST00000428209 PUM3Q15397 648 aaKnown RBP20.55■□□□□ 0.88
PRDM5-203ENST00000428209 CCDC152Q4G0S7 254 aa20.55■□□□□ 0.88
PRDM5-203ENST00000428209 ZNF512BQ96KM6 892 aaPredicted RBP20.55■□□□□ 0.88
PRDM5-203ENST00000428209 SEC31BQ9NQW1 1179 aa20.55■□□□□ 0.88
PRDM5-203ENST00000428209 ISY1Q9ULR0 285 aaKnown RBP20.55■□□□□ 0.88
PRDM5-203ENST00000428209 XRCC6P12956 609 aaKnown RBP eCLIP20.55■□□□□ 0.88
PRDM5-203ENST00000428209 LPIN2Q92539 896 aa20.55■□□□□ 0.88
PRDM5-203ENST00000428209 CAVIN1Q6NZI2 390 aaKnown RBP20.54■□□□□ 0.88
PRDM5-203ENST00000428209 CLEC4GQ6UXB4 293 aa20.54■□□□□ 0.88
PRDM5-203ENST00000428209 PTF1AQ7RTS3 328 aa20.54■□□□□ 0.88
PRDM5-203ENST00000428209 GPT2Q8TD30 523 aa20.54■□□□□ 0.88
PRDM5-203ENST00000428209 COL5A3P25940 1745 aaPredicted RBP20.54■□□□□ 0.88
PRDM5-203ENST00000428209 MRE11P49959 708 aa20.54■□□□□ 0.88
PRDM5-203ENST00000428209 CCDC102BQ68D86 513 aa20.54■□□□□ 0.88
PRDM5-203ENST00000428209 STOX1Q6ZVD7 989 aa20.54■□□□□ 0.88
PRDM5-203ENST00000428209 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.54■□□□□ 0.88
PRDM5-203ENST00000428209 HMGB1P09429 215 aaKnown RBP20.53■□□□□ 0.88
PRDM5-203ENST00000428209 Q6ZUG5 572 aa20.53■□□□□ 0.88
PRDM5-203ENST00000428209 APPBP2Q92624 585 aa20.53■□□□□ 0.88
PRDM5-203ENST00000428209 FGFR2P21802 821 aa20.53■□□□□ 0.88
PRDM5-203ENST00000428209 PHKA1P46020 1223 aa20.53■□□□□ 0.88
PRDM5-203ENST00000428209 STK3Q13188 491 aa20.52■□□□□ 0.88
PRDM5-203ENST00000428209 TTF1Q15361 905 aaPredicted RBP20.52■□□□□ 0.88
PRDM5-203ENST00000428209 GAS2L3Q86XJ1 694 aa20.52■□□□□ 0.88
PRDM5-203ENST00000428209 UQCRFS1P1P0C7P4 283 aa20.52■□□□□ 0.87
PRDM5-203ENST00000428209 IGHMBP2P38935 993 aaKnown RBP20.52■□□□□ 0.87
PRDM5-203ENST00000428209 FGD1P98174 961 aa20.52■□□□□ 0.87
PRDM5-203ENST00000428209 PUS7LQ9H0K6 701 aaKnown RBP20.52■□□□□ 0.87
PRDM5-203ENST00000428209 GRPEL1Q9HAV7 217 aa20.52■□□□□ 0.87
PRDM5-203ENST00000428209 AKAP11Q9UKA4 1901 aa20.51■□□□□ 0.87
PRDM5-203ENST00000428209 ZNF831Q5JPB2 1677 aa20.51■□□□□ 0.87
PRDM5-203ENST00000428209 LRP5O75197 1615 aa20.51■□□□□ 0.87
PRDM5-203ENST00000428209 A0A0G2JLW4 131 aa20.51■□□□□ 0.87
PRDM5-203ENST00000428209 F13A1P00488 732 aa20.51■□□□□ 0.87
PRDM5-203ENST00000428209 SLC5A1P13866 664 aa20.51■□□□□ 0.87
PRDM5-203ENST00000428209 ZSCAN25Q6NSZ9 544 aa20.51■□□□□ 0.87
PRDM5-203ENST00000428209 DHX32Q7L7V1 743 aaKnown RBP20.51■□□□□ 0.87
PRDM5-203ENST00000428209 DDX60Q8IY21 1712 aaKnown RBP20.51■□□□□ 0.87
PRDM5-203ENST00000428209 CNTNAP4Q9C0A0 1308 aa20.51■□□□□ 0.87
PRDM5-203ENST00000428209 E7EWF7 191 aa20.5■□□□□ 0.87
PRDM5-203ENST00000428209 ARID4AP29374 1257 aaPredicted RBP20.5■□□□□ 0.87
PRDM5-203ENST00000428209 TTLL5Q6EMB2 1281 aa20.5■□□□□ 0.87
PRDM5-203ENST00000428209 LRRC2Q9BYS8 371 aa20.5■□□□□ 0.87
PRDM5-203ENST00000428209 GDPD2Q9HCC8 539 aa20.5■□□□□ 0.87
PRDM5-203ENST00000428209 CTNNA3Q9UI47 895 aa20.5■□□□□ 0.87
PRDM5-203ENST00000428209 MTMR6Q9Y217 621 aa20.5■□□□□ 0.87
PRDM5-203ENST00000428209 ATP6V1DQ9Y5K8 247 aa20.5■□□□□ 0.87
PRDM5-203ENST00000428209 MBD3O95983 291 aa20.49■□□□□ 0.87
PRDM5-203ENST00000428209 FAM182BQ5T319 152 aa20.49■□□□□ 0.87
PRDM5-203ENST00000428209 SLC9C2Q5TAH2 1124 aa20.49■□□□□ 0.87
PRDM5-203ENST00000428209 LARP1BQ659C4 914 aaKnown RBP20.49■□□□□ 0.87
PRDM5-203ENST00000428209 BRF1Q92994 677 aa20.49■□□□□ 0.87
PRDM5-203ENST00000428209 RTL9Q8NET4 1388 aa20.49■□□□□ 0.87
PRDM5-203ENST00000428209 VPS37CA5D8V6 355 aaPredicted RBP20.49■□□□□ 0.87
PRDM5-203ENST00000428209 SNAP23O00161 211 aa20.49■□□□□ 0.87
PRDM5-203ENST00000428209 IDH1O75874 414 aaKnown RBP20.49■□□□□ 0.87
PRDM5-203ENST00000428209 ZSCAN23Q3MJ62 389 aa20.49■□□□□ 0.87
PRDM5-203ENST00000428209 PIH1D3Q9NQM4 214 aaKnown RBP20.49■□□□□ 0.87
PRDM5-203ENST00000428209 GPAA1O43292 621 aa20.48■□□□□ 0.87
PRDM5-203ENST00000428209 ADD2P35612 726 aa20.48■□□□□ 0.87
PRDM5-203ENST00000428209 ERFEQ4G0M1 354 aa20.48■□□□□ 0.87
PRDM5-203ENST00000428209 BICDL1Q6ZP65 573 aa20.48■□□□□ 0.87
PRDM5-203ENST00000428209 SMIM5Q71RC9 77 aa20.48■□□□□ 0.87
PRDM5-203ENST00000428209 USP48Q86UV5 1035 aa20.48■□□□□ 0.87
PRDM5-203ENST00000428209 NSFL1CQ9UNZ2 370 aaKnown RBP20.48■□□□□ 0.87
PRDM5-203ENST00000428209 MYH7P12883 1935 aa20.48■□□□□ 0.87
PRDM5-203ENST00000428209 BCORQ6W2J9 1755 aa20.48■□□□□ 0.87
PRDM5-203ENST00000428209 FOXP2O15409 715 aa20.48■□□□□ 0.87
PRDM5-203ENST00000428209 PDIA4P13667 645 aaKnown RBP20.48■□□□□ 0.87
PRDM5-203ENST00000428209 MEX3CQ5U5Q3 659 aaKnown RBP20.48■□□□□ 0.87
PRDM5-203ENST00000428209 RBM27Q9P2N5 1060 aaKnown RBP20.48■□□□□ 0.87
PRDM5-203ENST00000428209 TCHHQ07283 1943 aa20.47■□□□□ 0.87
PRDM5-203ENST00000428209 FGAP02671 866 aa20.47■□□□□ 0.87
PRDM5-203ENST00000428209 PDCP20941 246 aa20.47■□□□□ 0.87
PRDM5-203ENST00000428209 IMMTQ16891 758 aaKnown RBP20.47■□□□□ 0.87
PRDM5-203ENST00000428209 GTF3C6Q969F1 213 aa20.47■□□□□ 0.87
PRDM5-203ENST00000428209 LAMA4Q16363 1823 aa20.47■□□□□ 0.87
PRDM5-203ENST00000428209 EXOSC10Q01780 885 aaKnown RBP20.47■□□□□ 0.87
PRDM5-203ENST00000428209 RC3H1Q5TC82 1133 aaKnown RBP20.47■□□□□ 0.87
PRDM5-203ENST00000428209 CDC5LQ99459 802 aaKnown RBP20.47■□□□□ 0.87
PRDM5-203ENST00000428209 PANK2Q9BZ23 570 aa20.47■□□□□ 0.87
PRDM5-203ENST00000428209 CNPY2Q9Y2B0 182 aa20.47■□□□□ 0.87
PRDM5-203ENST00000428209 GTF2E1P29083 439 aaPredicted RBP20.46■□□□□ 0.87
PRDM5-203ENST00000428209 ZNF445P59923 1031 aa20.46■□□□□ 0.87
PRDM5-203ENST00000428209 SPATA5Q8NB90 893 aa20.46■□□□□ 0.87
PRDM5-203ENST00000428209 LAMB2P55268 1798 aa20.46■□□□□ 0.87
PRDM5-203ENST00000428209 RPS6KA4O75676 772 aa20.45■□□□□ 0.87
PRDM5-203ENST00000428209 HAND2P61296 217 aa20.45■□□□□ 0.87
PRDM5-203ENST00000428209 CHRNDQ07001 517 aa20.45■□□□□ 0.86
PRDM5-203ENST00000428209 UBE3CQ15386 1083 aa20.45■□□□□ 0.86
PRDM5-203ENST00000428209 TBC1D9BQ66K14 1250 aa20.45■□□□□ 0.86
PRDM5-203ENST00000428209 GJD4Q96KN9 370 aaPredicted RBP20.45■□□□□ 0.86
PRDM5-203ENST00000428209 CCNL1Q9UK58 526 aaPredicted RBP20.45■□□□□ 0.86
PRDM5-203ENST00000428209 GADD45BO75293 160 aaPredicted RBP20.44■□□□□ 0.86
PRDM5-203ENST00000428209 RASGRF1Q13972 1273 aa20.44■□□□□ 0.86
PRDM5-203ENST00000428209 TMEM63CQ9P1W3 806 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms