RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 TM4SF4P48230 202 aa11.23□□□□□ -0.61
VNN3-208ENST00000427187 PTPN12Q05209 780 aaKnown RBP11.23□□□□□ -0.61
VNN3-208ENST00000427187 PKN2Q16513 984 aaKnown RBP11.23□□□□□ -0.61
VNN3-208ENST00000427187 PODNQ7Z5L7 613 aa11.23□□□□□ -0.61
VNN3-208ENST00000427187 TXNRD3Q86VQ6 643 aa11.23□□□□□ -0.61
VNN3-208ENST00000427187 CWC25Q9NXE8 425 aaPredicted RBP11.23□□□□□ -0.61
VNN3-208ENST00000427187 KLRK1P26718 216 aa11.22□□□□□ -0.61
VNN3-208ENST00000427187 WDR43Q15061 677 aaKnown RBP eCLIP11.22□□□□□ -0.61
VNN3-208ENST00000427187 RALBP1Q15311 655 aa11.22□□□□□ -0.61
VNN3-208ENST00000427187 DACT2Q5SW24 774 aa11.22□□□□□ -0.61
VNN3-208ENST00000427187 FBXO46Q6PJ61 603 aaPredicted RBP11.22□□□□□ -0.61
VNN3-208ENST00000427187 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
VNN3-208ENST00000427187 MED23Q9ULK4 1368 aa11.22□□□□□ -0.61
VNN3-208ENST00000427187 ADAMTS8Q9UP79 889 aa11.22□□□□□ -0.61
VNN3-208ENST00000427187 MYH3P11055 1940 aa11.21□□□□□ -0.61
VNN3-208ENST00000427187 FKTNO75072 461 aa11.21□□□□□ -0.61
VNN3-208ENST00000427187 NF2P35240 595 aa11.21□□□□□ -0.61
VNN3-208ENST00000427187 CTSWP56202 376 aa11.21□□□□□ -0.61
VNN3-208ENST00000427187 KIAA0825Q8IV33 1275 aa11.21□□□□□ -0.61
VNN3-208ENST00000427187 OGFOD1Q8N543 542 aa11.21□□□□□ -0.61
VNN3-208ENST00000427187 METTL22Q9BUU2 404 aaPredicted RBP11.21□□□□□ -0.61
VNN3-208ENST00000427187 GREM2Q9H772 168 aa11.21□□□□□ -0.61
VNN3-208ENST00000427187 ANGEL1Q9UNK9 670 aaKnown RBP11.21□□□□□ -0.61
VNN3-208ENST00000427187 MINPP1Q9UNW1 487 aa11.21□□□□□ -0.61
VNN3-208ENST00000427187 MYBBP1AQ9BQG0 1328 aaKnown RBP11.2□□□□□ -0.62
VNN3-208ENST00000427187 HSP90B1P14625 803 aaKnown RBP11.2□□□□□ -0.62
VNN3-208ENST00000427187 CCT4P50991 539 aaKnown RBP11.2□□□□□ -0.62
VNN3-208ENST00000427187 SREBF2Q12772 1141 aa11.2□□□□□ -0.62
VNN3-208ENST00000427187 C8orf58Q8NAV2 365 aa11.2□□□□□ -0.62
VNN3-208ENST00000427187 CDC5LQ99459 802 aaKnown RBP11.2□□□□□ -0.62
VNN3-208ENST00000427187 MAP3K2Q9Y2U5 619 aa11.2□□□□□ -0.62
VNN3-208ENST00000427187 KIAA0100Q14667 2235 aaKnown RBP11.2□□□□□ -0.62
VNN3-208ENST00000427187 POTEFA5A3E0 1075 aa11.19□□□□□ -0.62
VNN3-208ENST00000427187 IGKV5-2P06315 115 aa11.19□□□□□ -0.62
VNN3-208ENST00000427187 ZNF853P0CG23 659 aa11.19□□□□□ -0.62
VNN3-208ENST00000427187 CWF19L2Q2TBE0 894 aaKnown RBP11.19□□□□□ -0.62
VNN3-208ENST00000427187 STRIP1Q5VSL9 837 aa11.19□□□□□ -0.62
VNN3-208ENST00000427187 SPRYD7Q5W111 196 aa11.19□□□□□ -0.62
VNN3-208ENST00000427187 ARMC9Q7Z3E5 817 aa11.19□□□□□ -0.62
VNN3-208ENST00000427187 TTLL11Q8NHH1 800 aa11.19□□□□□ -0.62
VNN3-208ENST00000427187 CLMNQ96JQ2 1002 aa11.19□□□□□ -0.62
VNN3-208ENST00000427187 BSDC1Q9NW68 430 aaPredicted RBP11.19□□□□□ -0.62
VNN3-208ENST00000427187 TRIM17Q9Y577 477 aa11.19□□□□□ -0.62
VNN3-208ENST00000427187 PCDHAC2Q9Y5I4 1007 aa11.19□□□□□ -0.62
VNN3-208ENST00000427187 PI4KAP2A4QPH2 592 aa11.18□□□□□ -0.62
VNN3-208ENST00000427187 GTF2IP78347 998 aa11.18□□□□□ -0.62
VNN3-208ENST00000427187 TTLL5Q6EMB2 1281 aa11.18□□□□□ -0.62
VNN3-208ENST00000427187 TSPYL6Q8N831 410 aa11.18□□□□□ -0.62
VNN3-208ENST00000427187 PI4KAP1Q8N8J0 262 aa11.18□□□□□ -0.62
VNN3-208ENST00000427187 COA1Q9GZY4 146 aa11.18□□□□□ -0.62
VNN3-208ENST00000427187 SSC5DA1L4H1 1573 aa11.18□□□□□ -0.62
VNN3-208ENST00000427187 MYO3BQ8WXR4 1341 aa11.17□□□□□ -0.62
VNN3-208ENST00000427187 SNAP23O00161 211 aa11.17□□□□□ -0.62
VNN3-208ENST00000427187 IGF2BP3O00425 579 aaKnown RBP eCLIP11.17□□□□□ -0.62
VNN3-208ENST00000427187 DDX58O95786 925 aaKnown RBP11.17□□□□□ -0.62
VNN3-208ENST00000427187 DDX10Q13206 875 aaKnown RBP11.17□□□□□ -0.62
VNN3-208ENST00000427187 NOM1Q5C9Z4 860 aaKnown RBP11.17□□□□□ -0.62
VNN3-208ENST00000427187 LDLRAD1Q5T700 205 aa11.17□□□□□ -0.62
VNN3-208ENST00000427187 OTOP1Q7RTM1 612 aa11.17□□□□□ -0.62
VNN3-208ENST00000427187 APOBEC3FQ8IUX4 373 aaKnown RBP11.17□□□□□ -0.62
VNN3-208ENST00000427187 CFHR5Q9BXR6 569 aa11.17□□□□□ -0.62
VNN3-208ENST00000427187 IFT57Q9NWB7 429 aa11.17□□□□□ -0.62
VNN3-208ENST00000427187 ZNF804BA4D1E1 1349 aa11.16□□□□□ -0.62
VNN3-208ENST00000427187 AOX1Q06278 1338 aa11.16□□□□□ -0.62
VNN3-208ENST00000427187 CLRN2A0PK11 232 aa11.16□□□□□ -0.62
VNN3-208ENST00000427187 F8W031 263 aaPredicted RBP11.16□□□□□ -0.62
VNN3-208ENST00000427187 APAF1O14727 1248 aa11.16□□□□□ -0.62
VNN3-208ENST00000427187 IGHMBP2P38935 993 aaKnown RBP11.16□□□□□ -0.62
VNN3-208ENST00000427187 GNAI1P63096 354 aa11.16□□□□□ -0.62
VNN3-208ENST00000427187 HABP4Q5JVS0 413 aaKnown RBP11.16□□□□□ -0.62
VNN3-208ENST00000427187 KSR2Q6VAB6 950 aa11.16□□□□□ -0.62
VNN3-208ENST00000427187 UBE3BQ7Z3V4 1068 aa11.16□□□□□ -0.62
VNN3-208ENST00000427187 IFNL1Q8IU54 200 aa11.16□□□□□ -0.62
VNN3-208ENST00000427187 CD99L2Q8TCZ2 262 aa11.16□□□□□ -0.62
VNN3-208ENST00000427187 SLC10A4Q96EP9 437 aa11.16□□□□□ -0.62
VNN3-208ENST00000427187 ZBED3Q96IU2 234 aaPredicted RBP11.16□□□□□ -0.62
VNN3-208ENST00000427187 DEFB129Q9H1M3 183 aa11.16□□□□□ -0.62
VNN3-208ENST00000427187 JAG2Q9Y219 1238 aa11.16□□□□□ -0.62
VNN3-208ENST00000427187 ECM29Q5VYK3 1845 aa11.15□□□□□ -0.62
VNN3-208ENST00000427187 MANSC4A6NHS7 340 aaPredicted RBP11.15□□□□□ -0.62
VNN3-208ENST00000427187 NEURL1BA8MQ27 555 aa11.15□□□□□ -0.62
VNN3-208ENST00000427187 ITGA6P23229 1130 aa11.15□□□□□ -0.62
VNN3-208ENST00000427187 CAP1Q01518 475 aa11.15□□□□□ -0.62
VNN3-208ENST00000427187 CCDC30Q5VVM6 783 aa11.15□□□□□ -0.62
VNN3-208ENST00000427187 G2E3Q7L622 706 aa11.15□□□□□ -0.62
VNN3-208ENST00000427187 CERS5Q8N5B7 392 aa11.15□□□□□ -0.62
VNN3-208ENST00000427187 TSR2Q969E8 191 aaKnown RBP11.15□□□□□ -0.62
VNN3-208ENST00000427187 WNK4Q96J92 1243 aa11.15□□□□□ -0.62
VNN3-208ENST00000427187 LEMD3Q9Y2U8 911 aa11.15□□□□□ -0.62
VNN3-208ENST00000427187 CEP290O15078 2479 aa11.14□□□□□ -0.63
VNN3-208ENST00000427187 OTOFQ9HC10 1997 aa11.14□□□□□ -0.63
VNN3-208ENST00000427187 TAF5LO75529 589 aa11.14□□□□□ -0.63
VNN3-208ENST00000427187 ALDH1A1P00352 501 aa11.14□□□□□ -0.63
VNN3-208ENST00000427187 EN2P19622 333 aaPredicted RBP11.14□□□□□ -0.63
VNN3-208ENST00000427187 GJA5P36382 358 aa11.14□□□□□ -0.63
VNN3-208ENST00000427187 KCNJ4P48050 445 aa11.14□□□□□ -0.63
VNN3-208ENST00000427187 NEXNQ0ZGT2 675 aa11.14□□□□□ -0.63
VNN3-208ENST00000427187 CRHR2Q13324 411 aa11.14□□□□□ -0.63
VNN3-208ENST00000427187 DLGAP5Q15398 846 aa11.14□□□□□ -0.63
VNN3-208ENST00000427187 HELBQ8NG08 1087 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms