RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 TBC1D10BQ4KMP7 808 aaPredicted RBP23.12■■□□□ 1.29
SMARCAL1-205ENST00000425815 CST9Q5W186 159 aa23.12■■□□□ 1.29
SMARCAL1-205ENST00000425815 USP17L1Q7RTZ2 530 aa23.12■■□□□ 1.29
SMARCAL1-205ENST00000425815 SCN9AQ15858 1988 aa23.11■■□□□ 1.29
SMARCAL1-205ENST00000425815 ZNF280AP59817 542 aaPredicted RBP23.11■■□□□ 1.29
SMARCAL1-205ENST00000425815 C15orf52Q6ZUT6 534 aaKnown RBP23.11■■□□□ 1.29
SMARCAL1-205ENST00000425815 AGBL3Q8NEM8 1001 aa23.11■■□□□ 1.29
SMARCAL1-205ENST00000425815 MXD3Q9BW11 206 aa23.11■■□□□ 1.29
SMARCAL1-205ENST00000425815 MKRN1Q9UHC7 482 aaKnown RBP23.11■■□□□ 1.29
SMARCAL1-205ENST00000425815 DACT2Q5SW24 774 aa23.1■■□□□ 1.29
SMARCAL1-205ENST00000425815 RBM26Q5T8P6 1007 aaKnown RBP23.1■■□□□ 1.29
SMARCAL1-205ENST00000425815 GLIS2Q9BZE0 524 aaPredicted RBP23.1■■□□□ 1.29
SMARCAL1-205ENST00000425815 RIPOR2Q9Y4F9 1068 aa23.1■■□□□ 1.29
SMARCAL1-205ENST00000425815 ZNF609O15014 1411 aa23.09■■□□□ 1.29
SMARCAL1-205ENST00000425815 TAF7LQ5H9L4 462 aa23.09■■□□□ 1.29
SMARCAL1-205ENST00000425815 API5Q9BZZ5 524 aaKnown RBP23.09■■□□□ 1.29
SMARCAL1-205ENST00000425815 CNNM1Q9NRU3 951 aa23.09■■□□□ 1.29
SMARCAL1-205ENST00000425815 SPEF2Q9C093 1822 aa23.08■■□□□ 1.29
SMARCAL1-205ENST00000425815 PLIN1O60240 522 aa23.08■■□□□ 1.29
SMARCAL1-205ENST00000425815 BCAR3O75815 825 aa23.08■■□□□ 1.29
SMARCAL1-205ENST00000425815 KCNJ4P48050 445 aa23.08■■□□□ 1.29
SMARCAL1-205ENST00000425815 DLK2Q6UY11 383 aa23.08■■□□□ 1.29
SMARCAL1-205ENST00000425815 ARHGAP45Q92619 1136 aa23.08■■□□□ 1.29
SMARCAL1-205ENST00000425815 CD209Q9NNX6 404 aa23.08■■□□□ 1.29
SMARCAL1-205ENST00000425815 CNTNAP1P78357 1384 aa23.07■■□□□ 1.28
SMARCAL1-205ENST00000425815 STRIP1Q5VSL9 837 aa23.07■■□□□ 1.28
SMARCAL1-205ENST00000425815 ASTN2O75129 1339 aaPredicted RBP23.07■■□□□ 1.28
SMARCAL1-205ENST00000425815 KIF4BQ2VIQ3 1234 aa23.06■■□□□ 1.28
SMARCAL1-205ENST00000425815 LRRC24Q50LG9 513 aa23.06■■□□□ 1.28
SMARCAL1-205ENST00000425815 TTLL5Q6EMB2 1281 aa23.06■■□□□ 1.28
SMARCAL1-205ENST00000425815 CDC37L1Q7L3B6 337 aa23.06■■□□□ 1.28
SMARCAL1-205ENST00000425815 USP48Q86UV5 1035 aa23.06■■□□□ 1.28
SMARCAL1-205ENST00000425815 KLHDC4Q8TBB5 520 aa23.06■■□□□ 1.28
SMARCAL1-205ENST00000425815 PCNTO95613 3336 aa23.06■■□□□ 1.28
SMARCAL1-205ENST00000425815 USP17L8P0C7I0 530 aa23.05■■□□□ 1.28
SMARCAL1-205ENST00000425815 RFX5P48382 616 aaPredicted RBP23.05■■□□□ 1.28
SMARCAL1-205ENST00000425815 RASSF10A6NK89 507 aa23.04■■□□□ 1.28
SMARCAL1-205ENST00000425815 VEGFBP49765 207 aa23.04■■□□□ 1.28
SMARCAL1-205ENST00000425815 TNNQ9UQP3 1299 aa23.04■■□□□ 1.28
SMARCAL1-205ENST00000425815 IL1R1P14778 569 aa23.03■■□□□ 1.28
SMARCAL1-205ENST00000425815 GTF2IP78347 998 aa23.03■■□□□ 1.28
SMARCAL1-205ENST00000425815 DEFB115Q30KQ5 88 aa23.03■■□□□ 1.28
SMARCAL1-205ENST00000425815 INTS3Q68E01 1043 aaKnown RBP23.03■■□□□ 1.28
SMARCAL1-205ENST00000425815 MYOZ2Q9NPC6 264 aa23.03■■□□□ 1.28
SMARCAL1-205ENST00000425815 CELF2O95319 508 aaKnown RBP23.02■■□□□ 1.28
SMARCAL1-205ENST00000425815 UBE4AQ14139 1066 aa23.02■■□□□ 1.28
SMARCAL1-205ENST00000425815 SCARF1Q14162 830 aa23.02■■□□□ 1.28
SMARCAL1-205ENST00000425815 VGLL2Q8N8G2 317 aa23.02■■□□□ 1.28
SMARCAL1-205ENST00000425815 FBXW7Q969H0 707 aa23.02■■□□□ 1.28
SMARCAL1-205ENST00000425815 TRIM27P14373 513 aa23.01■■□□□ 1.27
SMARCAL1-205ENST00000425815 MEIS3Q99687 375 aa23.01■■□□□ 1.27
SMARCAL1-205ENST00000425815 ABT1Q9ULW3 272 aaKnown RBP23.01■■□□□ 1.27
SMARCAL1-205ENST00000425815 MROH5Q6ZUA9 1318 aa23.01■■□□□ 1.27
SMARCAL1-205ENST00000425815 KIF16BQ96L93 1317 aa23.01■■□□□ 1.27
SMARCAL1-205ENST00000425815 ADM5C9JUS6 153 aa23■■□□□ 1.27
SMARCAL1-205ENST00000425815 UBTFL1P0CB47 393 aaPredicted RBP23■■□□□ 1.27
SMARCAL1-205ENST00000425815 PTPN12Q05209 780 aaKnown RBP23■■□□□ 1.27
SMARCAL1-205ENST00000425815 KRT26Q7Z3Y9 468 aa23■■□□□ 1.27
SMARCAL1-205ENST00000425815 CERS5Q8N5B7 392 aa23■■□□□ 1.27
SMARCAL1-205ENST00000425815 FAM84BQ96KN1 310 aaPredicted RBP23■■□□□ 1.27
SMARCAL1-205ENST00000425815 TLL2Q9Y6L7 1015 aa23■■□□□ 1.27
SMARCAL1-205ENST00000425815 ZNF804AQ7Z570 1209 aa22.99■■□□□ 1.27
SMARCAL1-205ENST00000425815 DCPSQ96C86 337 aaKnown RBP22.99■■□□□ 1.27
SMARCAL1-205ENST00000425815 GGA3Q9NZ52 723 aa22.99■■□□□ 1.27
SMARCAL1-205ENST00000425815 ZBED9Q6R2W3 1325 aa22.99■■□□□ 1.27
SMARCAL1-205ENST00000425815 MYO3BQ8WXR4 1341 aa22.99■■□□□ 1.27
SMARCAL1-205ENST00000425815 IPO8O15397 1037 aaKnown RBP22.98■■□□□ 1.27
SMARCAL1-205ENST00000425815 GYG1P46976 350 aa22.98■■□□□ 1.27
SMARCAL1-205ENST00000425815 NBPF9Q3BBW0 867 aa22.98■■□□□ 1.27
SMARCAL1-205ENST00000425815 ANGEL2Q5VTE6 544 aaKnown RBP22.98■■□□□ 1.27
SMARCAL1-205ENST00000425815 ATF7IPQ6VMQ6 1270 aa22.98■■□□□ 1.27
SMARCAL1-205ENST00000425815 SAPCD2Q86UD0 394 aa22.98■■□□□ 1.27
SMARCAL1-205ENST00000425815 FRAT1Q92837 279 aaPredicted RBP22.98■■□□□ 1.27
SMARCAL1-205ENST00000425815 LRRFIP2Q9Y608 721 aaKnown RBP22.98■■□□□ 1.27
SMARCAL1-205ENST00000425815 PSME4Q14997 1843 aa22.97■■□□□ 1.27
SMARCAL1-205ENST00000425815 PDE8BO95263 885 aa22.97■■□□□ 1.27
SMARCAL1-205ENST00000425815 METTL24Q5JXM2 366 aa22.97■■□□□ 1.27
SMARCAL1-205ENST00000425815 ATG9AQ7Z3C6 839 aa22.97■■□□□ 1.27
SMARCAL1-205ENST00000425815 KIAA0825Q8IV33 1275 aa22.97■■□□□ 1.27
SMARCAL1-205ENST00000425815 TDRD7Q8NHU6 1098 aaKnown RBP22.97■■□□□ 1.27
SMARCAL1-205ENST00000425815 ZNF408Q9H9D4 720 aa22.97■■□□□ 1.27
SMARCAL1-205ENST00000425815 ZNF646O15015 1829 aaPredicted RBP22.96■■□□□ 1.27
SMARCAL1-205ENST00000425815 EYA2O00167 538 aa22.96■■□□□ 1.27
SMARCAL1-205ENST00000425815 WNT10BO00744 389 aa22.96■■□□□ 1.27
SMARCAL1-205ENST00000425815 SASH1O94885 1247 aa22.96■■□□□ 1.27
SMARCAL1-205ENST00000425815 HSPA1AP0DMV8 641 aaKnown RBP22.96■■□□□ 1.27
SMARCAL1-205ENST00000425815 HSPA1BP0DMV9 641 aaKnown RBP22.96■■□□□ 1.27
SMARCAL1-205ENST00000425815 HIBADHP31937 336 aaKnown RBP22.96■■□□□ 1.27
SMARCAL1-205ENST00000425815 FBXO33Q7Z6M2 555 aa22.96■■□□□ 1.27
SMARCAL1-205ENST00000425815 ZBED3Q96IU2 234 aaPredicted RBP22.96■■□□□ 1.27
SMARCAL1-205ENST00000425815 SCAF8Q9UPN6 1271 aaKnown RBP22.96■■□□□ 1.27
SMARCAL1-205ENST00000425815 JAG2Q9Y219 1238 aa22.96■■□□□ 1.27
SMARCAL1-205ENST00000425815 A0A1B0GUL6 1792 aa22.95■■□□□ 1.26
SMARCAL1-205ENST00000425815 FGFR2P21802 821 aa22.95■■□□□ 1.26
SMARCAL1-205ENST00000425815 OGFOD1Q8N543 542 aa22.95■■□□□ 1.26
SMARCAL1-205ENST00000425815 CLUAP1Q96AJ1 413 aa22.95■■□□□ 1.26
SMARCAL1-205ENST00000425815 WDR33Q9C0J8 1336 aaKnown RBP22.95■■□□□ 1.26
SMARCAL1-205ENST00000425815 FAM205AQ6ZU69 1335 aa22.94■■□□□ 1.26
SMARCAL1-205ENST00000425815 MMP14P50281 582 aa22.94■■□□□ 1.26
SMARCAL1-205ENST00000425815 FKBP1AP62942 108 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms