RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 NARFQ9UHQ1 456 aa7.14□□□□□ -1.27
VPS8-205ENST00000424721 NUDCQ9Y266 331 aa7.14□□□□□ -1.27
VPS8-205ENST00000424721 MAP2P11137 1827 aaKnown RBP7.13□□□□□ -1.27
VPS8-205ENST00000424721 KIF20BQ96Q89 1820 aa7.13□□□□□ -1.27
VPS8-205ENST00000424721 C5P01031 1676 aa7.13□□□□□ -1.27
VPS8-205ENST00000424721 NPHP1O15259 732 aa7.13□□□□□ -1.27
VPS8-205ENST00000424721 FBXO45P0C2W1 286 aa7.13□□□□□ -1.27
VPS8-205ENST00000424721 PDE6BP35913 854 aa7.13□□□□□ -1.27
VPS8-205ENST00000424721 TEFQ10587 303 aa7.13□□□□□ -1.27
VPS8-205ENST00000424721 C4orf48Q5BLP8 95 aa7.13□□□□□ -1.27
VPS8-205ENST00000424721 INTS5Q6P9B9 1019 aaKnown RBP7.13□□□□□ -1.27
VPS8-205ENST00000424721 SH3BP5LQ7L8J4 393 aa7.13□□□□□ -1.27
VPS8-205ENST00000424721 TTLL6Q8N841 843 aa7.13□□□□□ -1.27
VPS8-205ENST00000424721 GAS2L2Q8NHY3 880 aa7.13□□□□□ -1.27
VPS8-205ENST00000424721 CFAP53Q96M91 514 aa7.13□□□□□ -1.27
VPS8-205ENST00000424721 USP42Q9H9J4 1324 aaKnown RBP7.12□□□□□ -1.27
VPS8-205ENST00000424721 MAGEB6P1A0A0J9YX57 407 aa7.12□□□□□ -1.27
VPS8-205ENST00000424721 GNAT3A8MTJ3 354 aa7.12□□□□□ -1.27
VPS8-205ENST00000424721 SERPINB2P05120 415 aa7.12□□□□□ -1.27
VPS8-205ENST00000424721 NEFMP07197 916 aa7.12□□□□□ -1.27
VPS8-205ENST00000424721 CYP19A1P11511 503 aaPredicted RBP7.12□□□□□ -1.27
VPS8-205ENST00000424721 KCNA3P22001 575 aa7.12□□□□□ -1.27
VPS8-205ENST00000424721 MCCD1P59942 119 aaPredicted RBP7.12□□□□□ -1.27
VPS8-205ENST00000424721 USPL1Q5W0Q7 1092 aa7.12□□□□□ -1.27
VPS8-205ENST00000424721 AEBP1Q8IUX7 1158 aa7.12□□□□□ -1.27
VPS8-205ENST00000424721 DNAJC10Q8IXB1 793 aa7.12□□□□□ -1.27
VPS8-205ENST00000424721 GLMNQ92990 594 aa7.12□□□□□ -1.27
VPS8-205ENST00000424721 LGR6Q9HBX8 967 aa7.12□□□□□ -1.27
VPS8-205ENST00000424721 RNF181Q9P0P0 153 aa7.12□□□□□ -1.27
VPS8-205ENST00000424721 ADCY9O60503 1353 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 ITGB4P16144 1822 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 PKD1L3Q7Z443 1732 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 SHANK3Q9BYB0 1731 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 POLRMTO00411 1230 aaKnown RBP7.11□□□□□ -1.27
VPS8-205ENST00000424721 U2SURPO15042 1029 aaKnown RBP7.11□□□□□ -1.27
VPS8-205ENST00000424721 GFRA3O60609 400 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 HMOX1P09601 288 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 VEGFAP15692 232 aaPredicted RBP7.11□□□□□ -1.27
VPS8-205ENST00000424721 LMNB1P20700 586 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 VARSP26640 1264 aaKnown RBP7.11□□□□□ -1.27
VPS8-205ENST00000424721 PRR20EP86478 221 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 PRR20CP86479 221 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 PRR20DP86480 221 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 PRR20BP86481 221 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 PRR20AP86496 221 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 SEMA3FQ13275 785 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 SH3RF1Q7Z6J0 888 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 ZBTB33Q86T24 672 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 SMC1BQ8NDV3 1235 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 RTF1Q92541 710 aaKnown RBP7.11□□□□□ -1.27
VPS8-205ENST00000424721 CCDC97Q96F63 343 aaPredicted RBP7.11□□□□□ -1.27
VPS8-205ENST00000424721 CALR3Q96L12 384 aaKnown RBP7.11□□□□□ -1.27
VPS8-205ENST00000424721 SETDB2Q96T68 719 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 ARID3AQ99856 593 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 RRAGCQ9HB90 399 aa7.11□□□□□ -1.27
VPS8-205ENST00000424721 SRP68Q9UHB9 627 aaKnown RBP7.11□□□□□ -1.27
VPS8-205ENST00000424721 KDRP35968 1356 aa7.1□□□□□ -1.27
VPS8-205ENST00000424721 POM121CA8CG34 1229 aa7.1□□□□□ -1.27
VPS8-205ENST00000424721 CANXP27824 592 aaKnown RBP7.1□□□□□ -1.27
VPS8-205ENST00000424721 SLC39A6Q13433 755 aa7.1□□□□□ -1.27
VPS8-205ENST00000424721 MTHFSDQ2M296 383 aaKnown RBP7.1□□□□□ -1.27
VPS8-205ENST00000424721 CC2D1BQ5T0F9 858 aaKnown RBP7.1□□□□□ -1.27
VPS8-205ENST00000424721 SOGA3Q5TF21 947 aa7.1□□□□□ -1.27
VPS8-205ENST00000424721 C2CD5Q86YS7 1000 aa7.1□□□□□ -1.27
VPS8-205ENST00000424721 CYP4X1Q8N118 509 aa7.1□□□□□ -1.27
VPS8-205ENST00000424721 FMNL2Q96PY5 1086 aa7.1□□□□□ -1.27
VPS8-205ENST00000424721 OCSTAMPQ9BR26 566 aa7.1□□□□□ -1.27
VPS8-205ENST00000424721 BRIP1Q9BX63 1249 aa7.1□□□□□ -1.27
VPS8-205ENST00000424721 IRX2Q9BZI1 471 aaPredicted RBP7.1□□□□□ -1.27
VPS8-205ENST00000424721 TAF1LQ8IZX4 1826 aa7.1□□□□□ -1.27
VPS8-205ENST00000424721 C10orf71Q711Q0 1435 aa7.1□□□□□ -1.27
VPS8-205ENST00000424721 SOS1Q07889 1333 aaPredicted RBP7.09□□□□□ -1.27
VPS8-205ENST00000424721 TUBGCP6Q96RT7 1819 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 GLTPD2A6NH11 291 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 SIAH2O43255 324 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 CHRNA5P30532 468 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 IL6STP40189 918 aaPredicted RBP7.09□□□□□ -1.27
VPS8-205ENST00000424721 NFIXQ14938 502 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 ZNF790Q6PG37 636 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 FAM174AQ8TBP5 190 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 ADAM32Q8TC27 787 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 CNKSR1Q969H4 720 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 ZNF622Q969S3 477 aaKnown RBP eCLIP7.09□□□□□ -1.274e-8■□□□□ 8.1
VPS8-205ENST00000424721 SLC10A4Q96EP9 437 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 PNNQ9H307 717 aaKnown RBP7.09□□□□□ -1.27
VPS8-205ENST00000424721 NMRK2Q9NPI5 230 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 SERPINA10Q9UK55 444 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 CDV3Q9UKY7 258 aaKnown RBP7.09□□□□□ -1.27
VPS8-205ENST00000424721 TLL2Q9Y6L7 1015 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 PXDNLA1KZ92 1463 aa7.09□□□□□ -1.27
VPS8-205ENST00000424721 KDM6AO15550 1401 aaPredicted RBP7.09□□□□□ -1.28
VPS8-205ENST00000424721 UBR3Q6ZT12 1888 aa7.09□□□□□ -1.28
VPS8-205ENST00000424721 TTC24A2A3L6 582 aaPredicted RBP7.08□□□□□ -1.28
VPS8-205ENST00000424721 BTBD11A6QL63 1104 aa7.08□□□□□ -1.28
VPS8-205ENST00000424721 HTATSF1O43719 755 aaKnown RBP7.08□□□□□ -1.28
VPS8-205ENST00000424721 EIF5P55010 431 aaKnown RBP7.08□□□□□ -1.28
VPS8-205ENST00000424721 ST5P78524 1137 aa7.08□□□□□ -1.28
VPS8-205ENST00000424721 DDR1Q08345 913 aa7.08□□□□□ -1.28
VPS8-205ENST00000424721 CLEC4GQ6UXB4 293 aa7.08□□□□□ -1.28
VPS8-205ENST00000424721 TPTE2Q6XPS3 522 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms