RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 COA1Q9GZY4 146 aa31.44■■■□□ 2.62
TSPAN3-203ENST00000424443 GPBP1L1Q9HC44 474 aaPredicted RBP31.44■■■□□ 2.62
TSPAN3-203ENST00000424443 GJA3Q9Y6H8 435 aa31.44■■■□□ 2.62
TSPAN3-203ENST00000424443 IFIT1P09914 478 aaKnown RBP31.44■■■□□ 2.62
TSPAN3-203ENST00000424443 PODNQ7Z5L7 613 aa31.44■■■□□ 2.62
TSPAN3-203ENST00000424443 ZNF784Q8NCA9 323 aaPredicted RBP31.44■■■□□ 2.62
TSPAN3-203ENST00000424443 RAD17O75943 681 aa31.43■■■□□ 2.62
TSPAN3-203ENST00000424443 DDNO94850 711 aaPredicted RBP31.43■■■□□ 2.62
TSPAN3-203ENST00000424443 SLC5A1P13866 664 aa31.43■■■□□ 2.62
TSPAN3-203ENST00000424443 TNIP1Q15025 636 aa31.43■■■□□ 2.62
TSPAN3-203ENST00000424443 CIAPIN1Q6FI81 312 aa31.43■■■□□ 2.62
TSPAN3-203ENST00000424443 GPC2Q8N158 579 aa31.42■■■□□ 2.62
TSPAN3-203ENST00000424443 LPIN2Q92539 896 aa31.42■■■□□ 2.62
TSPAN3-203ENST00000424443 AKAP2Q9Y2D5 859 aa31.42■■■□□ 2.62
TSPAN3-203ENST00000424443 YDJCA8MPS7 323 aa31.41■■■□□ 2.62
TSPAN3-203ENST00000424443 CXCL9Q07325 125 aa31.41■■■□□ 2.62
TSPAN3-203ENST00000424443 TFCP2Q12800 502 aa31.41■■■□□ 2.62
TSPAN3-203ENST00000424443 ATP2B3Q16720 1220 aa31.41■■■□□ 2.62
TSPAN3-203ENST00000424443 CAVIN4Q5BKX8 364 aa31.41■■■□□ 2.62
TSPAN3-203ENST00000424443 VPS37DQ86XT2 251 aa31.41■■■□□ 2.62
TSPAN3-203ENST00000424443 NOP58Q9Y2X3 529 aaKnown RBP31.41■■■□□ 2.62
TSPAN3-203ENST00000424443 HSP90AB4PQ58FF6 505 aa31.4■■■□□ 2.62
TSPAN3-203ENST00000424443 CENPBP07199 599 aaPredicted RBP31.39■■■□□ 2.62
TSPAN3-203ENST00000424443 AAMPQ13685 434 aa31.39■■■□□ 2.62
TSPAN3-203ENST00000424443 SIRT2Q8IXJ6 389 aa31.39■■■□□ 2.62
TSPAN3-203ENST00000424443 FGFR2P21802 821 aa31.39■■■□□ 2.61
TSPAN3-203ENST00000424443 HIBADHP31937 336 aaKnown RBP31.38■■■□□ 2.61
TSPAN3-203ENST00000424443 CD209Q9NNX6 404 aa31.38■■■□□ 2.61
TSPAN3-203ENST00000424443 EXOC6BQ9Y2D4 811 aa31.38■■■□□ 2.61
TSPAN3-203ENST00000424443 IRS2Q9Y4H2 1338 aa31.38■■■□□ 2.61
TSPAN3-203ENST00000424443 GYG1P46976 350 aa31.37■■■□□ 2.61
TSPAN3-203ENST00000424443 ERC1Q8IUD2 1116 aa31.37■■■□□ 2.61
TSPAN3-203ENST00000424443 FBXW7Q969H0 707 aa31.37■■■□□ 2.61
TSPAN3-203ENST00000424443 EXOC6Q8TAG9 804 aa31.36■■■□□ 2.61
TSPAN3-203ENST00000424443 KCNQ5Q9NR82 932 aa31.36■■■□□ 2.61
TSPAN3-203ENST00000424443 PSMD14O00487 310 aa31.35■■■□□ 2.61
TSPAN3-203ENST00000424443 SASH1O94885 1247 aa31.35■■■□□ 2.61
TSPAN3-203ENST00000424443 IRX6P78412 446 aaPredicted RBP31.35■■■□□ 2.61
TSPAN3-203ENST00000424443 FAM84BQ96KN1 310 aaPredicted RBP31.35■■■□□ 2.61
TSPAN3-203ENST00000424443 RRAGCQ9HB90 399 aa31.35■■■□□ 2.61
TSPAN3-203ENST00000424443 USP17L3A6NCW0 530 aa31.34■■■□□ 2.61
TSPAN3-203ENST00000424443 USP17L4A6NCW7 530 aa31.34■■■□□ 2.61
TSPAN3-203ENST00000424443 USP17L1Q7RTZ2 530 aa31.34■■■□□ 2.61
TSPAN3-203ENST00000424443 FRAT2O75474 233 aaPredicted RBP31.34■■■□□ 2.61
TSPAN3-203ENST00000424443 NEUROD6Q96NK8 337 aa31.34■■■□□ 2.61
TSPAN3-203ENST00000424443 NMRK2Q9NPI5 230 aa31.34■■■□□ 2.61
TSPAN3-203ENST00000424443 A0A1B0GUL7 405 aa31.33■■■□□ 2.61
TSPAN3-203ENST00000424443 IL1R1P14778 569 aa31.33■■■□□ 2.61
TSPAN3-203ENST00000424443 LMOD1P29536 600 aaPredicted RBP31.33■■■□□ 2.61
TSPAN3-203ENST00000424443 TIMM10P62072 90 aa31.33■■■□□ 2.61
TSPAN3-203ENST00000424443 L3MBTL3Q96JM7 780 aaPredicted RBP31.33■■■□□ 2.61
TSPAN3-203ENST00000424443 PCDHB15Q9Y5E8 787 aa31.33■■■□□ 2.61
TSPAN3-203ENST00000424443 IQCA1LA6NCM1 817 aa31.32■■■□□ 2.6
TSPAN3-203ENST00000424443 VEGFAP15692 232 aaPredicted RBP31.32■■■□□ 2.6
TSPAN3-203ENST00000424443 FBXO33Q7Z6M2 555 aa31.32■■■□□ 2.6
TSPAN3-203ENST00000424443 WDR90Q96KV7 1748 aa31.31■■■□□ 2.6
TSPAN3-203ENST00000424443 BCAMP50895 628 aa31.31■■■□□ 2.6
TSPAN3-203ENST00000424443 TTLL5Q6EMB2 1281 aa31.31■■■□□ 2.6
TSPAN3-203ENST00000424443 APBB1O00213 710 aa31.3■■■□□ 2.6
TSPAN3-203ENST00000424443 RAB11FIP3O75154 756 aa31.3■■■□□ 2.6
TSPAN3-203ENST00000424443 VIL1P09327 827 aaKnown RBP31.3■■■□□ 2.6
TSPAN3-203ENST00000424443 GTF2IP78347 998 aa31.3■■■□□ 2.6
TSPAN3-203ENST00000424443 STRIP1Q5VSL9 837 aa31.3■■■□□ 2.6
TSPAN3-203ENST00000424443 GPR108Q9NPR9 543 aa31.3■■■□□ 2.6
TSPAN3-203ENST00000424443 SCN9AQ15858 1988 aa31.3■■■□□ 2.6
TSPAN3-203ENST00000424443 GMPSP49915 693 aaPredicted RBP31.29■■■□□ 2.6
TSPAN3-203ENST00000424443 GORABQ5T7V8 394 aa31.29■■■□□ 2.6
TSPAN3-203ENST00000424443 GNL3LQ9NVN8 582 aaKnown RBP31.29■■■□□ 2.6
TSPAN3-203ENST00000424443 TDRD7Q8NHU6 1098 aaKnown RBP31.29■■■□□ 2.6
TSPAN3-203ENST00000424443 KIF1BPQ96EK5 621 aa31.29■■■□□ 2.6
TSPAN3-203ENST00000424443 HACL1Q9UJ83 578 aa31.29■■■□□ 2.6
TSPAN3-203ENST00000424443 ZBTB12Q9Y330 459 aaPredicted RBP31.29■■■□□ 2.6
TSPAN3-203ENST00000424443 RPS12P25398 132 aaKnown RBP31.28■■■□□ 2.6
TSPAN3-203ENST00000424443 TNNI3KQ59H18 835 aa31.28■■■□□ 2.6
TSPAN3-203ENST00000424443 RSBN1LQ6PCB5 846 aaPredicted RBP31.28■■■□□ 2.6
TSPAN3-203ENST00000424443 C16orf71Q8IYS4 520 aaPredicted RBP31.28■■■□□ 2.6
TSPAN3-203ENST00000424443 RHPN1Q8TCX5 695 aa31.28■■■□□ 2.6
TSPAN3-203ENST00000424443 XAGE2Q96GT9 111 aa31.28■■■□□ 2.6
TSPAN3-203ENST00000424443 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.28■■■□□ 2.6
TSPAN3-203ENST00000424443 FPGT-TNNI3KV9GXZ4 949 aa31.28■■■□□ 2.6
TSPAN3-203ENST00000424443 ZNF609O15014 1411 aa31.27■■■□□ 2.6
TSPAN3-203ENST00000424443 IQSEC3Q9UPP2 1182 aaPredicted RBP31.27■■■□□ 2.6
TSPAN3-203ENST00000424443 PSME4Q14997 1843 aa31.26■■■□□ 2.59
TSPAN3-203ENST00000424443 ADORA1P30542 326 aa31.26■■■□□ 2.59
TSPAN3-203ENST00000424443 MYO3BQ8WXR4 1341 aa31.26■■■□□ 2.59
TSPAN3-203ENST00000424443 SCNN1DP51172 638 aa31.25■■■□□ 2.59
TSPAN3-203ENST00000424443 AGBL3Q8NEM8 1001 aa31.25■■■□□ 2.59
TSPAN3-203ENST00000424443 DPF2Q92785 391 aa31.25■■■□□ 2.59
TSPAN3-203ENST00000424443 SCN4AP35499 1836 aa31.25■■■□□ 2.59
TSPAN3-203ENST00000424443 DACT2Q5SW24 774 aa31.24■■■□□ 2.59
TSPAN3-203ENST00000424443 BCL11AQ9H165 835 aa31.24■■■□□ 2.59
TSPAN3-203ENST00000424443 GPRC5DQ9NZD1 345 aa31.24■■■□□ 2.59
TSPAN3-203ENST00000424443 ARAP2Q8WZ64 1704 aa31.24■■■□□ 2.59
TSPAN3-203ENST00000424443 POTECB2RU33 542 aa31.24■■■□□ 2.59
TSPAN3-203ENST00000424443 CCDC102BQ68D86 513 aa31.24■■■□□ 2.59
TSPAN3-203ENST00000424443 CLASRPQ8N2M8 674 aaKnown RBP31.24■■■□□ 2.59
TSPAN3-203ENST00000424443 CNOT7Q9UIV1 285 aaKnown RBP31.24■■■□□ 2.59
TSPAN3-203ENST00000424443 H7C1D1 291 aa31.23■■■□□ 2.59
TSPAN3-203ENST00000424443 EPHX2P34913 555 aa31.23■■■□□ 2.59
TSPAN3-203ENST00000424443 CHAF1AQ13111 956 aaPredicted RBP31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms